RNA–Protein interactions for RNA: ENST00000464817.1

XPR1-203, Transcript of xenotropic and polytropic retrovirus receptor 1, humanhuman

TSL 3

Gene XPR1, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPR1-203ENST00000464817 STAG3Q9UJ98 1225 aa12.83□□□□□ -0.36
XPR1-203ENST00000464817 ATMINO43313 823 aaPredicted RBP12.82□□□□□ -0.36
XPR1-203ENST00000464817 SLC39A7Q92504 469 aa12.82□□□□□ -0.36
XPR1-203ENST00000464817 C7P10643 843 aa12.81□□□□□ -0.36
XPR1-203ENST00000464817 MAMSTRQ6ZN01 415 aa12.81□□□□□ -0.36
XPR1-203ENST00000464817 PAK3O75914 559 aaPredicted RBP12.79□□□□□ -0.36
XPR1-203ENST00000464817 MS4A3Q96HJ5 214 aa12.78□□□□□ -0.36
XPR1-203ENST00000464817 SCUBE2Q9NQ36 999 aa12.71□□□□□ -0.37
XPR1-203ENST00000464817 MNX1P50219 401 aaPredicted RBP12.7□□□□□ -0.38
XPR1-203ENST00000464817 CDAN1Q8IWY9 1227 aa12.69□□□□□ -0.38
XPR1-203ENST00000464817 POTEFA5A3E0 1075 aa12.68□□□□□ -0.38
XPR1-203ENST00000464817 NPM1P06748 294 aaKnown RBP eCLIP12.66□□□□□ -0.38
XPR1-203ENST00000464817 ATN1P54259 1190 aaPredicted RBP12.64□□□□□ -0.39
XPR1-203ENST00000464817 BMP2KQ9NSY1 1161 aaPredicted RBP12.51□□□□□ -0.41
XPR1-203ENST00000464817 SPDYE4A6NLX3 237 aa12.5□□□□□ -0.41
XPR1-203ENST00000464817 TRPC6Q9Y210 931 aa12.5□□□□□ -0.41
XPR1-203ENST00000464817 MMRN1Q13201 1228 aa12.49□□□□□ -0.41
XPR1-203ENST00000464817 COLQQ9Y215 455 aaPredicted RBP12.47□□□□□ -0.41
XPR1-203ENST00000464817 CCDC61Q9Y6R9 512 aa12.45□□□□□ -0.42
XPR1-203ENST00000464817 ST18O60284 1047 aa12.43□□□□□ -0.42
XPR1-203ENST00000464817 SPNS2Q8IVW8 549 aa12.43□□□□□ -0.42
XPR1-203ENST00000464817 KIF12Q96FN5 646 aa12.42□□□□□ -0.42
XPR1-203ENST00000464817 TSPYL2Q9H2G4 693 aaPredicted RBP12.4□□□□□ -0.42
XPR1-203ENST00000464817 TIE1P35590 1138 aa12.35□□□□□ -0.43
XPR1-203ENST00000464817 TTLL13PA6NNM8 815 aa12.31□□□□□ -0.44
XPR1-203ENST00000464817 SEC24BO95487 1268 aa12.3□□□□□ -0.44
XPR1-203ENST00000464817 MAP3K13O43283 966 aa12.29□□□□□ -0.44
XPR1-203ENST00000464817 SLAIN1Q8ND83 568 aa12.29□□□□□ -0.44
XPR1-203ENST00000464817 PROM2Q8N271 834 aa12.26□□□□□ -0.45
XPR1-203ENST00000464817 IER5LQ5T953 404 aa12.23□□□□□ -0.45
XPR1-203ENST00000464817 FBXO3Q9UK99 471 aa12.21□□□□□ -0.45
XPR1-203ENST00000464817 TRIM35Q9UPQ4 493 aa12.21□□□□□ -0.45
XPR1-203ENST00000464817 TMEM121BQ9BXQ6 578 aaPredicted RBP12.18□□□□□ -0.46
XPR1-203ENST00000464817 RTN4Q9NQC3 1192 aaKnown RBP12.18□□□□□ -0.46
XPR1-203ENST00000464817 AMER1Q5JTC6 1135 aaPredicted RBP12.14□□□□□ -0.47
XPR1-203ENST00000464817 MARVELD3Q96A59 401 aa12.14□□□□□ -0.47
XPR1-203ENST00000464817 RASEFQ8IZ41 740 aa12.13□□□□□ -0.47
XPR1-203ENST00000464817 PLEKHG5O94827 1062 aa12.08□□□□□ -0.48
XPR1-203ENST00000464817 VASPP50552 380 aaPredicted RBP12.08□□□□□ -0.48
XPR1-203ENST00000464817 SGIP1Q9BQI5 828 aa12.08□□□□□ -0.48
XPR1-203ENST00000464817 KRTAP3-3Q9BYR6 98 aa12.06□□□□□ -0.48
XPR1-203ENST00000464817 KRTAP3-2Q9BYR7 98 aa12.06□□□□□ -0.48
XPR1-203ENST00000464817 IRX5P78411 483 aaPredicted RBP12.04□□□□□ -0.48
XPR1-203ENST00000464817 PLCG2P16885 1265 aa12.03□□□□□ -0.48
XPR1-203ENST00000464817 POTEB3A0JP26 581 aa12.01□□□□□ -0.49
XPR1-203ENST00000464817 POTEBQ6S5H4 581 aa12.01□□□□□ -0.49
XPR1-203ENST00000464817 PCDHB13Q9Y5F0 798 aa12□□□□□ -0.49
XPR1-203ENST00000464817 MIER1Q8N108 512 aa11.99□□□□□ -0.49
XPR1-203ENST00000464817 SNPHO15079 494 aa11.97□□□□□ -0.49
XPR1-203ENST00000464817 IFNL1Q8IU54 200 aa11.97□□□□□ -0.49
XPR1-203ENST00000464817 TMEM106CQ9BVX2 250 aa11.96□□□□□ -0.49
XPR1-203ENST00000464817 IFNLR1Q8IU57 520 aaPredicted RBP11.94□□□□□ -0.5
XPR1-203ENST00000464817 EMP3P54852 163 aa11.93□□□□□ -0.5
XPR1-203ENST00000464817 HS3ST6Q96QI5 342 aa11.92□□□□□ -0.5
XPR1-203ENST00000464817 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.89□□□□□ -0.51
XPR1-203ENST00000464817 OCEL1Q9H607 264 aa11.88□□□□□ -0.51
XPR1-203ENST00000464817 PLCD3Q8N3E9 789 aa11.86□□□□□ -0.51
XPR1-203ENST00000464817 KLHL34Q8N239 644 aa11.85□□□□□ -0.51
XPR1-203ENST00000464817 FAM205CA6NFA0 338 aa11.84□□□□□ -0.51
XPR1-203ENST00000464817 ZBTB47Q9UFB7 747 aaPredicted RBP11.83□□□□□ -0.52
XPR1-203ENST00000464817 NUBP1P53384 320 aa11.81□□□□□ -0.52
XPR1-203ENST00000464817 FAM212AQ96EL1 285 aa11.76□□□□□ -0.53
XPR1-203ENST00000464817 PDCD7Q8N8D1 485 aaKnown RBP11.74□□□□□ -0.53
XPR1-203ENST00000464817 SPOCK2Q92563 424 aa11.74□□□□□ -0.53
XPR1-203ENST00000464817 RNF166Q96A37 237 aaPredicted RBP11.7□□□□□ -0.54
XPR1-203ENST00000464817 C3orf67Q6ZVT6 689 aa11.69□□□□□ -0.54
XPR1-203ENST00000464817 PKD2Q13563 968 aa11.64□□□□□ -0.55
XPR1-203ENST00000464817 L3MBTL3Q96JM7 780 aaPredicted RBP11.62□□□□□ -0.55
XPR1-203ENST00000464817 DCAF8L2P0C7V8 631 aa11.61□□□□□ -0.55
XPR1-203ENST00000464817 HOXB3P14651 431 aaPredicted RBP11.6□□□□□ -0.55
XPR1-203ENST00000464817 PCDHB8Q9UN66 801 aa11.58□□□□□ -0.56
XPR1-203ENST00000464817 PYGBP11216 843 aa11.57□□□□□ -0.56
XPR1-203ENST00000464817 DCAF8Q5TAQ9 597 aa11.57□□□□□ -0.56
XPR1-203ENST00000464817 MYT1LQ9UL68 1186 aa11.56□□□□□ -0.56
XPR1-203ENST00000464817 CIZ1Q9ULV3 898 aaPredicted RBP11.56□□□□□ -0.56
XPR1-203ENST00000464817 ECM2O94769 699 aaPredicted RBP11.54□□□□□ -0.56
XPR1-203ENST00000464817 HOXB1P14653 301 aaPredicted RBP11.53□□□□□ -0.56
XPR1-203ENST00000464817 MKRN3Q13064 507 aaKnown RBP11.52□□□□□ -0.57
XPR1-203ENST00000464817 GOLGA2Q08379 1002 aa11.5□□□□□ -0.57
XPR1-203ENST00000464817 ERBB3P21860 1342 aa11.48□□□□□ -0.57
XPR1-203ENST00000464817 ILDR1Q86SU0 546 aaPredicted RBP11.47□□□□□ -0.57
XPR1-203ENST00000464817 SLC24A1O60721 1099 aa11.46□□□□□ -0.57
XPR1-203ENST00000464817 ZNF467Q7Z7K2 595 aaPredicted RBP11.46□□□□□ -0.57
XPR1-203ENST00000464817 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.46□□□□□ -0.57
XPR1-203ENST00000464817 VARS2Q5ST30 1063 aaKnown RBP11.43□□□□□ -0.58
XPR1-203ENST00000464817 RGL2O15211 777 aa11.42□□□□□ -0.58
XPR1-203ENST00000464817 DPY19L2Q6NUT2 758 aa11.42□□□□□ -0.58
XPR1-203ENST00000464817 GSE1Q14687 1217 aa11.41□□□□□ -0.58
XPR1-203ENST00000464817 ZNF710Q8N1W2 664 aa11.39□□□□□ -0.59
XPR1-203ENST00000464817 CHRM1P11229 460 aaPredicted RBP11.35□□□□□ -0.59
XPR1-203ENST00000464817 PSEN1P49768 467 aa11.35□□□□□ -0.59
XPR1-203ENST00000464817 DOK7Q18PE1 504 aa11.35□□□□□ -0.59
XPR1-203ENST00000464817 ZNF687Q8N1G0 1237 aa11.35□□□□□ -0.59
XPR1-203ENST00000464817 TRIM41Q8WV44 630 aa11.35□□□□□ -0.59
XPR1-203ENST00000464817 PTGER2P43116 358 aa11.34□□□□□ -0.59
XPR1-203ENST00000464817 G3V3G9 751 aa11.33□□□□□ -0.6
XPR1-203ENST00000464817 BOLA1Q9Y3E2 137 aa11.33□□□□□ -0.6
XPR1-203ENST00000464817 RNF25Q96BH1 459 aaPredicted RBP11.28□□□□□ -0.6
XPR1-203ENST00000464817 RIMBP2O15034 1052 aa11.27□□□□□ -0.61
XPR1-203ENST00000464817 CHGAP10645 457 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 154.1 ms