RNA–Protein interactions for RNA: ENST00000464729.1

NUP188-202, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 408 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-202ENST00000464729 KLHL34Q8N239 644 aa14.27□□□□□ -0.13
NUP188-202ENST00000464729 PHF12Q96QT6 1004 aa14.25□□□□□ -0.13
NUP188-202ENST00000464729 CCDC61Q9Y6R9 512 aa14.25□□□□□ -0.13
NUP188-202ENST00000464729 FAM212AQ96EL1 285 aa14.2□□□□□ -0.14
NUP188-202ENST00000464729 SPOCK2Q92563 424 aa14.15□□□□□ -0.14
NUP188-202ENST00000464729 GALR2O43603 387 aaPredicted RBP14.14□□□□□ -0.15
NUP188-202ENST00000464729 KIF12Q96FN5 646 aa14.12□□□□□ -0.15
NUP188-202ENST00000464729 DCAF8Q5TAQ9 597 aa14.11□□□□□ -0.15
NUP188-202ENST00000464729 MS4A3Q96HJ5 214 aa14.09□□□□□ -0.15
NUP188-202ENST00000464729 GSE1Q14687 1217 aa14.06□□□□□ -0.16
NUP188-202ENST00000464729 MAP3K13O43283 966 aa14.05□□□□□ -0.16
NUP188-202ENST00000464729 POTEIP0CG38 1075 aa14.04□□□□□ -0.16
NUP188-202ENST00000464729 DCBLD2Q96PD2 775 aa14.01□□□□□ -0.17
NUP188-202ENST00000464729 SGIP1Q9BQI5 828 aa14.01□□□□□ -0.17
NUP188-202ENST00000464729 PYGBP11216 843 aa13.98□□□□□ -0.17
NUP188-202ENST00000464729 PCDHB13Q9Y5F0 798 aa13.97□□□□□ -0.17
NUP188-202ENST00000464729 CIZ1Q9ULV3 898 aaPredicted RBP13.95□□□□□ -0.18
NUP188-202ENST00000464729 IFNL1Q8IU54 200 aa13.93□□□□□ -0.18
NUP188-202ENST00000464729 CHRM1P11229 460 aaPredicted RBP13.92□□□□□ -0.18
NUP188-202ENST00000464729 TRPC6Q9Y210 931 aa13.92□□□□□ -0.18
NUP188-202ENST00000464729 ASTLQ6HA08 431 aaPredicted RBP13.9□□□□□ -0.18
NUP188-202ENST00000464729 TIE1P35590 1138 aa13.88□□□□□ -0.19
NUP188-202ENST00000464729 ATMINO43313 823 aaPredicted RBP13.87□□□□□ -0.19
NUP188-202ENST00000464729 BMP2KQ9NSY1 1161 aaPredicted RBP13.86□□□□□ -0.19
NUP188-202ENST00000464729 TRIM41Q8WV44 630 aa13.84□□□□□ -0.19
NUP188-202ENST00000464729 PELP1Q8IZL8 1130 aaKnown RBP13.83□□□□□ -0.2
NUP188-202ENST00000464729 PCDHB8Q9UN66 801 aa13.83□□□□□ -0.2
NUP188-202ENST00000464729 ZNF467Q7Z7K2 595 aaPredicted RBP13.82□□□□□ -0.2
NUP188-202ENST00000464729 TTLL13PA6NNM8 815 aa13.81□□□□□ -0.2
NUP188-202ENST00000464729 ATN1P54259 1190 aaPredicted RBP13.81□□□□□ -0.2
NUP188-202ENST00000464729 TMEM106CQ9BVX2 250 aa13.75□□□□□ -0.21
NUP188-202ENST00000464729 SLC39A7Q92504 469 aa13.73□□□□□ -0.21
NUP188-202ENST00000464729 C7P10643 843 aa13.7□□□□□ -0.22
NUP188-202ENST00000464729 METRNQ9UJH8 293 aa13.7□□□□□ -0.22
NUP188-202ENST00000464729 TRIM35Q9UPQ4 493 aa13.7□□□□□ -0.22
NUP188-202ENST00000464729 PKD2Q13563 968 aa13.69□□□□□ -0.22
NUP188-202ENST00000464729 RNF25Q96BH1 459 aaPredicted RBP13.68□□□□□ -0.22
NUP188-202ENST00000464729 PSEN1P49768 467 aa13.67□□□□□ -0.22
NUP188-202ENST00000464729 PDAP1Q13442 181 aaKnown RBP13.67□□□□□ -0.22
NUP188-202ENST00000464729 LHX8Q68G74 356 aa13.66□□□□□ -0.22
NUP188-202ENST00000464729 ECM2O94769 699 aaPredicted RBP13.63□□□□□ -0.23
NUP188-202ENST00000464729 IER5LQ5T953 404 aa13.63□□□□□ -0.23
NUP188-202ENST00000464729 RIOK3O14730 519 aaKnown RBP13.62□□□□□ -0.23
NUP188-202ENST00000464729 POTEFA5A3E0 1075 aa13.59□□□□□ -0.23
NUP188-202ENST00000464729 POTEB2H3BUK9 544 aa13.58□□□□□ -0.24
NUP188-202ENST00000464729 VGFO15240 615 aaPredicted RBP13.56□□□□□ -0.24
NUP188-202ENST00000464729 COLQQ9Y215 455 aaPredicted RBP13.56□□□□□ -0.24
NUP188-202ENST00000464729 SEC24BO95487 1268 aa13.53□□□□□ -0.24
NUP188-202ENST00000464729 IRX5P78411 483 aaPredicted RBP13.53□□□□□ -0.24
NUP188-202ENST00000464729 RGL2O15211 777 aa13.52□□□□□ -0.25
NUP188-202ENST00000464729 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.51□□□□□ -0.25
NUP188-202ENST00000464729 GOLGA2Q08379 1002 aa13.51□□□□□ -0.25
NUP188-202ENST00000464729 ZFP91Q96JP5 570 aaPredicted RBP13.51□□□□□ -0.25
NUP188-202ENST00000464729 CABP2Q9NPB3 220 aa13.5□□□□□ -0.25
NUP188-202ENST00000464729 POTEJP0CG39 1038 aa13.48□□□□□ -0.25
NUP188-202ENST00000464729 MKRN3Q13064 507 aaKnown RBP13.48□□□□□ -0.25
NUP188-202ENST00000464729 TAOK2Q9UL54 1235 aa13.48□□□□□ -0.25
NUP188-202ENST00000464729 PLCG2P16885 1265 aa13.47□□□□□ -0.25
NUP188-202ENST00000464729 OCEL1Q9H607 264 aa13.46□□□□□ -0.25
NUP188-202ENST00000464729 ABCC9O60706 1549 aa13.44□□□□□ -0.26
NUP188-202ENST00000464729 OTUD5Q96G74 571 aa13.43□□□□□ -0.26
NUP188-202ENST00000464729 ILDR1Q86SU0 546 aaPredicted RBP13.42□□□□□ -0.26
NUP188-202ENST00000464729 PDCD7Q8N8D1 485 aaKnown RBP13.41□□□□□ -0.26
NUP188-202ENST00000464729 EFCAB3Q8N7B9 438 aa13.4□□□□□ -0.26
NUP188-202ENST00000464729 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.4□□□□□ -0.262e-8■□□□□ 10.1
NUP188-202ENST00000464729 BCL11BQ9C0K0 894 aaPredicted RBP13.39□□□□□ -0.27
NUP188-202ENST00000464729 MAMSTRQ6ZN01 415 aa13.38□□□□□ -0.27
NUP188-202ENST00000464729 STK25O00506 426 aa13.36□□□□□ -0.27
NUP188-202ENST00000464729 STK24Q9Y6E0 443 aa13.35□□□□□ -0.27
NUP188-202ENST00000464729 SCUBE2Q9NQ36 999 aa13.34□□□□□ -0.27
NUP188-202ENST00000464729 SOX12O15370 315 aa13.32□□□□□ -0.28
NUP188-202ENST00000464729 DPY19L2Q6NUT2 758 aa13.28□□□□□ -0.28
NUP188-202ENST00000464729 HS6ST3Q8IZP7 471 aa13.26□□□□□ -0.29
NUP188-202ENST00000464729 L3MBTL3Q96JM7 780 aaPredicted RBP13.26□□□□□ -0.29
NUP188-202ENST00000464729 AMER1Q5JTC6 1135 aaPredicted RBP13.25□□□□□ -0.29
NUP188-202ENST00000464729 PHF8Q9UPP1 1060 aa13.25□□□□□ -0.29
NUP188-202ENST00000464729 MS4A4AQ96JQ5 239 aa13.23□□□□□ -0.29
NUP188-202ENST00000464729 MFRPQ9BY79 579 aa13.22□□□□□ -0.29
NUP188-202ENST00000464729 NLRP6P59044 892 aa13.21□□□□□ -0.29
NUP188-202ENST00000464729 FBXO22Q8NEZ5 403 aa13.21□□□□□ -0.29
NUP188-202ENST00000464729 CHGAP10645 457 aaKnown RBP13.2□□□□□ -0.3
NUP188-202ENST00000464729 RTN4Q9NQC3 1192 aaKnown RBP13.2□□□□□ -0.3
NUP188-202ENST00000464729 BOLA1Q9Y3E2 137 aa13.19□□□□□ -0.3
NUP188-202ENST00000464729 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.17□□□□□ -0.3
NUP188-202ENST00000464729 C3orf67Q6ZVT6 689 aa13.16□□□□□ -0.3
NUP188-202ENST00000464729 DNAJC5Q9H3Z4 198 aa13.16□□□□□ -0.3
NUP188-202ENST00000464729 SLAIN1Q8ND83 568 aa13.15□□□□□ -0.3
NUP188-202ENST00000464729 TMEM121BQ9BXQ6 578 aaPredicted RBP13.15□□□□□ -0.3
NUP188-202ENST00000464729 G3V3G9 751 aa13.13□□□□□ -0.31
NUP188-202ENST00000464729 DCAF8L2P0C7V8 631 aa13.11□□□□□ -0.31
NUP188-202ENST00000464729 MICALL2Q8IY33 904 aa13.11□□□□□ -0.31
NUP188-202ENST00000464729 NKX1-1Q15270 411 aaPredicted RBP13.08□□□□□ -0.32
NUP188-202ENST00000464729 PPP1R37O75864 691 aa13□□□□□ -0.33
NUP188-202ENST00000464729 LCE2DQ5TA82 110 aaPredicted RBP12.98□□□□□ -0.33
NUP188-202ENST00000464729 TMEM92Q6UXU6 159 aa12.98□□□□□ -0.33
NUP188-202ENST00000464729 CCDC180Q9P1Z9 1646 aa12.98□□□□□ -0.33
NUP188-202ENST00000464729 RYDENQ9NUL5 291 aaKnown RBP12.96□□□□□ -0.33
NUP188-202ENST00000464729 FAM163AQ96GL9 167 aaPredicted RBP12.95□□□□□ -0.34
NUP188-202ENST00000464729 SNPHO15079 494 aa12.94□□□□□ -0.34
NUP188-202ENST00000464729 GTPBP6O43824 516 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms