RNA–Protein interactions for RNA: ENST00000464494.1

SSUH2-209, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 5

Gene SSUH2, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-209ENST00000464494 CDK11AQ9UQ88 783 aaPredicted RBP9.19□□□□□ -0.94
SSUH2-209ENST00000464494 ATF5Q9Y2D1 282 aaPredicted RBP9.17□□□□□ -0.94
SSUH2-209ENST00000464494 TRHP20396 242 aaPredicted RBP9.16□□□□□ -0.94
SSUH2-209ENST00000464494 C1QBPQ07021 282 aaKnown RBP9.16□□□□□ -0.94
SSUH2-209ENST00000464494 LMOD2Q6P5Q4 547 aa9.16□□□□□ -0.94
SSUH2-209ENST00000464494 HSP90B1P14625 803 aaKnown RBP9.14□□□□□ -0.95
SSUH2-209ENST00000464494 IGSF3O75054 1194 aa9.13□□□□□ -0.95
SSUH2-209ENST00000464494 NECTIN2Q92692 538 aa9.12□□□□□ -0.95
SSUH2-209ENST00000464494 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.11□□□□□ -0.95
SSUH2-209ENST00000464494 C1orf115Q9H7X2 142 aa9.1□□□□□ -0.95
SSUH2-209ENST00000464494 P3H3Q8IVL6 736 aa9.07□□□□□ -0.96
SSUH2-209ENST00000464494 HS6ST3Q8IZP7 471 aa9.06□□□□□ -0.96
SSUH2-209ENST00000464494 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.05□□□□□ -0.96
SSUH2-209ENST00000464494 PUS7Q96PZ0 661 aaKnown RBP9.04□□□□□ -0.96
SSUH2-209ENST00000464494 KCTD17Q8N5Z5 321 aa9.02□□□□□ -0.97
SSUH2-209ENST00000464494 PLEKHG5O94827 1062 aa9□□□□□ -0.97
SSUH2-209ENST00000464494 CHMP4AQ9BY43 222 aa8.99□□□□□ -0.97
SSUH2-209ENST00000464494 RAD21O60216 631 aa8.98□□□□□ -0.97
SSUH2-209ENST00000464494 SLC24A3Q9HC58 644 aa8.98□□□□□ -0.97
SSUH2-209ENST00000464494 ZC3H15Q8WU90 426 aaKnown RBP8.97□□□□□ -0.97
SSUH2-209ENST00000464494 APBB1O00213 710 aa8.96□□□□□ -0.98
SSUH2-209ENST00000464494 ARID3CA6NKF2 412 aa8.95□□□□□ -0.98
SSUH2-209ENST00000464494 RGS22Q8NE09 1264 aa8.95□□□□□ -0.98
SSUH2-209ENST00000464494 GTPBP6O43824 516 aaPredicted RBP8.93□□□□□ -0.98
SSUH2-209ENST00000464494 SAMD1Q6SPF0 538 aaPredicted RBP8.93□□□□□ -0.98
SSUH2-209ENST00000464494 NKX1-1Q15270 411 aaPredicted RBP8.9□□□□□ -0.98
SSUH2-209ENST00000464494 TRAIPQ9BWF2 469 aa8.9□□□□□ -0.98
SSUH2-209ENST00000464494 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.89□□□□□ -0.99
SSUH2-209ENST00000464494 HNRNPUL2Q1KMD3 747 aaKnown RBP8.89□□□□□ -0.99
SSUH2-209ENST00000464494 ZNF219Q9P2Y4 722 aaPredicted RBP8.88□□□□□ -0.99
SSUH2-209ENST00000464494 MTMR7Q9Y216 660 aa8.88□□□□□ -0.99
SSUH2-209ENST00000464494 TMCO4Q5TGY1 634 aa8.86□□□□□ -0.99
SSUH2-209ENST00000464494 KCNV2Q8TDN2 545 aa8.86□□□□□ -0.99
SSUH2-209ENST00000464494 RBM25P49756 843 aaKnown RBP8.85□□□□□ -0.99
SSUH2-209ENST00000464494 MKRN4PQ13434 485 aaPredicted RBP8.85□□□□□ -0.99
SSUH2-209ENST00000464494 U3KPZ7 1027 aaPredicted RBP8.85□□□□□ -0.99
SSUH2-209ENST00000464494 TRIM41Q8WV44 630 aa8.84□□□□□ -0.99
SSUH2-209ENST00000464494 CCDC82Q8N4S0 544 aa8.83□□□□□ -1
SSUH2-209ENST00000464494 CIZ1Q9ULV3 898 aaPredicted RBP8.83□□□□□ -1
SSUH2-209ENST00000464494 MFAP1P55081 439 aaKnown RBP8.81□□□□□ -1
SSUH2-209ENST00000464494 MKRN3Q13064 507 aaKnown RBP8.79□□□□□ -1
SSUH2-209ENST00000464494 FOXD4L5Q5VV16 416 aaPredicted RBP8.79□□□□□ -1
SSUH2-209ENST00000464494 AEBP1Q8IUX7 1158 aa8.79□□□□□ -1
SSUH2-209ENST00000464494 IL27Q8NEV9 243 aa8.79□□□□□ -1
SSUH2-209ENST00000464494 FOXD4L4Q8WXT5 416 aaPredicted RBP8.79□□□□□ -1
SSUH2-209ENST00000464494 E9PSI1 815 aa8.78□□□□□ -1
SSUH2-209ENST00000464494 ZMYND10O75800 440 aa8.78□□□□□ -1
SSUH2-209ENST00000464494 BRD2P25440 801 aaKnown RBP8.78□□□□□ -1
SSUH2-209ENST00000464494 ZNF428Q96B54 188 aa8.77□□□□□ -1.01
SSUH2-209ENST00000464494 WDR70Q9NW82 654 aa8.77□□□□□ -1.01
SSUH2-209ENST00000464494 FLIIQ13045 1269 aa8.76□□□□□ -1.01
SSUH2-209ENST00000464494 PLCD3Q8N3E9 789 aa8.75□□□□□ -1.01
SSUH2-209ENST00000464494 GPBP1L1Q9HC44 474 aaPredicted RBP8.75□□□□□ -1.01
SSUH2-209ENST00000464494 RYDENQ9NUL5 291 aaKnown RBP8.74□□□□□ -1.01
SSUH2-209ENST00000464494 GZF1Q9H116 711 aaPredicted RBP8.73□□□□□ -1.01
SSUH2-209ENST00000464494 STAG3Q9UJ98 1225 aa8.73□□□□□ -1.01
SSUH2-209ENST00000464494 RNF25Q96BH1 459 aaPredicted RBP8.72□□□□□ -1.01
SSUH2-209ENST00000464494 UBE2Q2Q8WVN8 375 aa8.71□□□□□ -1.02
SSUH2-209ENST00000464494 USP35Q9P2H5 1018 aa8.71□□□□□ -1.02
SSUH2-209ENST00000464494 A6NJR5 290 aa8.7□□□□□ -1.02
SSUH2-209ENST00000464494 CAPN15O75808 1086 aa8.7□□□□□ -1.02
SSUH2-209ENST00000464494 RSPH4AQ5TD94 716 aa8.7□□□□□ -1.02
SSUH2-209ENST00000464494 TRAK2O60296 914 aa8.69□□□□□ -1.02
SSUH2-209ENST00000464494 BARGINQ6ZT62 677 aa8.69□□□□□ -1.02
SSUH2-209ENST00000464494 AK7Q96M32 723 aa8.69□□□□□ -1.02
SSUH2-209ENST00000464494 KDM4CQ9H3R0 1056 aa8.69□□□□□ -1.02
SSUH2-209ENST00000464494 SPINK5Q9NQ38 1064 aaPredicted RBP8.69□□□□□ -1.02
SSUH2-209ENST00000464494 DHX37Q8IY37 1157 aaKnown RBP8.68□□□□□ -1.02
SSUH2-209ENST00000464494 TESPA1A2RU30 521 aaPredicted RBP8.67□□□□□ -1.02
SSUH2-209ENST00000464494 POLR3GLQ9BT43 218 aa8.67□□□□□ -1.02
SSUH2-209ENST00000464494 DSG3P32926 999 aa8.66□□□□□ -1.02
SSUH2-209ENST00000464494 ARHGEF1Q92888 912 aaKnown RBP8.66□□□□□ -1.02
SSUH2-209ENST00000464494 FAM177A1Q8N128 213 aaPredicted RBP8.65□□□□□ -1.02
SSUH2-209ENST00000464494 STK25O00506 426 aa8.63□□□□□ -1.03
SSUH2-209ENST00000464494 RIOK3O14730 519 aaKnown RBP8.63□□□□□ -1.03
SSUH2-209ENST00000464494 FBXW7Q969H0 707 aa8.62□□□□□ -1.03
SSUH2-209ENST00000464494 POLA2Q14181 598 aa8.61□□□□□ -1.03
SSUH2-209ENST00000464494 MIER1Q8N108 512 aa8.61□□□□□ -1.03
SSUH2-209ENST00000464494 SEMA3EO15041 775 aa8.6□□□□□ -1.03
SSUH2-209ENST00000464494 RETREG2Q8NC44 543 aa8.6□□□□□ -1.03
SSUH2-209ENST00000464494 ZBTB47Q9UFB7 747 aaPredicted RBP8.6□□□□□ -1.03
SSUH2-209ENST00000464494 SERPINA10Q9UK55 444 aa8.6□□□□□ -1.03
SSUH2-209ENST00000464494 ONECUT3O60422 494 aaPredicted RBP8.59□□□□□ -1.03
SSUH2-209ENST00000464494 CLUAP1Q96AJ1 413 aa8.59□□□□□ -1.03
SSUH2-209ENST00000464494 CCDC97Q96F63 343 aaPredicted RBP8.59□□□□□ -1.03
SSUH2-209ENST00000464494 SMYD5Q6GMV2 418 aa8.58□□□□□ -1.04
SSUH2-209ENST00000464494 AMOTL2Q9Y2J4 779 aa8.58□□□□□ -1.04
SSUH2-209ENST00000464494 CADPS2Q86UW7 1296 aa8.57□□□□□ -1.04
SSUH2-209ENST00000464494 ZNF316A6NFI3 1004 aaPredicted RBP8.56□□□□□ -1.04
SSUH2-209ENST00000464494 PATL2C9JE40 543 aaKnown RBP8.56□□□□□ -1.04
SSUH2-209ENST00000464494 IRF5Q13568 498 aa8.56□□□□□ -1.04
SSUH2-209ENST00000464494 FAM9AQ8IZU1 332 aaPredicted RBP8.56□□□□□ -1.04
SSUH2-209ENST00000464494 ZNF692Q9BU19 519 aaPredicted RBP8.56□□□□□ -1.04
SSUH2-209ENST00000464494 VGFO15240 615 aaPredicted RBP8.55□□□□□ -1.04
SSUH2-209ENST00000464494 PDE4DQ08499 809 aa8.55□□□□□ -1.04
SSUH2-209ENST00000464494 TAF7LQ5H9L4 462 aa8.54□□□□□ -1.04
SSUH2-209ENST00000464494 GSE1Q14687 1217 aa8.53□□□□□ -1.04
SSUH2-209ENST00000464494 CCDC125Q86Z20 511 aa8.53□□□□□ -1.04
SSUH2-209ENST00000464494 KRI1Q8N9T8 703 aaKnown RBP8.52□□□□□ -1.05
SSUH2-209ENST00000464494 TRIM66O15016 1216 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms