RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 FAM163AQ96GL9 167 aaPredicted RBP11.69□□□□□ -0.54
NDUFA4-202ENST00000463308 SCUBE2Q9NQ36 999 aa11.69□□□□□ -0.54
NDUFA4-202ENST00000463308 POTEJP0CG39 1038 aa11.67□□□□□ -0.54
NDUFA4-202ENST00000463308 NPM1P06748 294 aaKnown RBP eCLIP11.65□□□□□ -0.54
NDUFA4-202ENST00000463308 ATMINO43313 823 aaPredicted RBP11.64□□□□□ -0.55
NDUFA4-202ENST00000463308 MS4A3Q96HJ5 214 aa11.57□□□□□ -0.56
NDUFA4-202ENST00000463308 CDAN1Q8IWY9 1227 aa11.53□□□□□ -0.56
NDUFA4-202ENST00000463308 MNX1P50219 401 aaPredicted RBP11.48□□□□□ -0.57
NDUFA4-202ENST00000463308 ATN1P54259 1190 aaPredicted RBP11.46□□□□□ -0.57
NDUFA4-202ENST00000463308 POTEFA5A3E0 1075 aa11.38□□□□□ -0.59
NDUFA4-202ENST00000463308 BMP2KQ9NSY1 1161 aaPredicted RBP11.34□□□□□ -0.59
NDUFA4-202ENST00000463308 TIE1P35590 1138 aa11.32□□□□□ -0.6
NDUFA4-202ENST00000463308 MMRN1Q13201 1228 aa11.32□□□□□ -0.6
NDUFA4-202ENST00000463308 CCDC61Q9Y6R9 512 aa11.32□□□□□ -0.6
NDUFA4-202ENST00000463308 SEC24BO95487 1268 aa11.31□□□□□ -0.6
NDUFA4-202ENST00000463308 KIF12Q96FN5 646 aa11.31□□□□□ -0.6
NDUFA4-202ENST00000463308 SPDYE4A6NLX3 237 aa11.3□□□□□ -0.6
NDUFA4-202ENST00000463308 TSPYL2Q9H2G4 693 aaPredicted RBP11.3□□□□□ -0.6
NDUFA4-202ENST00000463308 ST18O60284 1047 aa11.27□□□□□ -0.61
NDUFA4-202ENST00000463308 SPNS2Q8IVW8 549 aa11.26□□□□□ -0.61
NDUFA4-202ENST00000463308 IER5LQ5T953 404 aa11.24□□□□□ -0.61
NDUFA4-202ENST00000463308 COLQQ9Y215 455 aaPredicted RBP11.24□□□□□ -0.61
NDUFA4-202ENST00000463308 SLAIN1Q8ND83 568 aa11.22□□□□□ -0.61
NDUFA4-202ENST00000463308 TRPC6Q9Y210 931 aa11.21□□□□□ -0.61
NDUFA4-202ENST00000463308 TMEM121BQ9BXQ6 578 aaPredicted RBP11.2□□□□□ -0.62
NDUFA4-202ENST00000463308 TTLL13PA6NNM8 815 aa11.19□□□□□ -0.62
NDUFA4-202ENST00000463308 MAP3K13O43283 966 aa11.17□□□□□ -0.62
NDUFA4-202ENST00000463308 TRIM35Q9UPQ4 493 aa11.13□□□□□ -0.63
NDUFA4-202ENST00000463308 SNPHO15079 494 aa11.1□□□□□ -0.63
NDUFA4-202ENST00000463308 SGIP1Q9BQI5 828 aa11.09□□□□□ -0.63
NDUFA4-202ENST00000463308 PLCG2P16885 1265 aa11.05□□□□□ -0.64
NDUFA4-202ENST00000463308 PLEKHG5O94827 1062 aa11.04□□□□□ -0.64
NDUFA4-202ENST00000463308 RASEFQ8IZ41 740 aa10.99□□□□□ -0.65
NDUFA4-202ENST00000463308 PCDHB13Q9Y5F0 798 aa10.99□□□□□ -0.65
NDUFA4-202ENST00000463308 MARVELD3Q96A59 401 aa10.96□□□□□ -0.65
NDUFA4-202ENST00000463308 IRX5P78411 483 aaPredicted RBP10.94□□□□□ -0.66
NDUFA4-202ENST00000463308 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.94□□□□□ -0.66
NDUFA4-202ENST00000463308 PROM2Q8N271 834 aa10.93□□□□□ -0.66
NDUFA4-202ENST00000463308 TMEM106CQ9BVX2 250 aa10.92□□□□□ -0.66
NDUFA4-202ENST00000463308 EMP3P54852 163 aa10.9□□□□□ -0.66
NDUFA4-202ENST00000463308 OCEL1Q9H607 264 aa10.9□□□□□ -0.66
NDUFA4-202ENST00000463308 IFNL1Q8IU54 200 aa10.87□□□□□ -0.67
NDUFA4-202ENST00000463308 MIER1Q8N108 512 aa10.87□□□□□ -0.67
NDUFA4-202ENST00000463308 KRTAP3-3Q9BYR6 98 aa10.86□□□□□ -0.67
NDUFA4-202ENST00000463308 KRTAP3-2Q9BYR7 98 aa10.86□□□□□ -0.67
NDUFA4-202ENST00000463308 CSRNP3Q8WYN3 585 aa10.84□□□□□ -0.67
NDUFA4-202ENST00000463308 HS3ST6Q96QI5 342 aa10.83□□□□□ -0.68
NDUFA4-202ENST00000463308 ZBTB47Q9UFB7 747 aaPredicted RBP10.79□□□□□ -0.68
NDUFA4-202ENST00000463308 FAM205CA6NFA0 338 aa10.77□□□□□ -0.69
NDUFA4-202ENST00000463308 C3orf67Q6ZVT6 689 aa10.76□□□□□ -0.69
NDUFA4-202ENST00000463308 POTEB3A0JP26 581 aa10.74□□□□□ -0.69
NDUFA4-202ENST00000463308 POTEBQ6S5H4 581 aa10.74□□□□□ -0.69
NDUFA4-202ENST00000463308 FAM212AQ96EL1 285 aa10.74□□□□□ -0.69
NDUFA4-202ENST00000463308 NUBP1P53384 320 aa10.72□□□□□ -0.69
NDUFA4-202ENST00000463308 PLCD3Q8N3E9 789 aa10.71□□□□□ -0.69
NDUFA4-202ENST00000463308 L3MBTL3Q96JM7 780 aaPredicted RBP10.7□□□□□ -0.7
NDUFA4-202ENST00000463308 RNF166Q96A37 237 aaPredicted RBP10.69□□□□□ -0.7
NDUFA4-202ENST00000463308 PDCD7Q8N8D1 485 aaKnown RBP10.64□□□□□ -0.71
NDUFA4-202ENST00000463308 MKRN3Q13064 507 aaKnown RBP10.57□□□□□ -0.72
NDUFA4-202ENST00000463308 MYT1LQ9UL68 1186 aa10.57□□□□□ -0.72
NDUFA4-202ENST00000463308 GOLGA2Q08379 1002 aa10.56□□□□□ -0.72
NDUFA4-202ENST00000463308 HOXB1P14653 301 aaPredicted RBP10.54□□□□□ -0.72
NDUFA4-202ENST00000463308 PTGER2P43116 358 aa10.52□□□□□ -0.73
NDUFA4-202ENST00000463308 PCDHB8Q9UN66 801 aa10.52□□□□□ -0.73
NDUFA4-202ENST00000463308 ERBB3P21860 1342 aa10.52□□□□□ -0.73
NDUFA4-202ENST00000463308 PYGBP11216 843 aa10.51□□□□□ -0.73
NDUFA4-202ENST00000463308 ZNF710Q8N1W2 664 aa10.51□□□□□ -0.73
NDUFA4-202ENST00000463308 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.5□□□□□ -0.73
NDUFA4-202ENST00000463308 HOXB3P14651 431 aaPredicted RBP10.49□□□□□ -0.73
NDUFA4-202ENST00000463308 DCAF8Q5TAQ9 597 aa10.48□□□□□ -0.73
NDUFA4-202ENST00000463308 DOK7Q18PE1 504 aa10.47□□□□□ -0.73
NDUFA4-202ENST00000463308 ZNF467Q7Z7K2 595 aaPredicted RBP10.46□□□□□ -0.73
NDUFA4-202ENST00000463308 G3V3G9 751 aa10.43□□□□□ -0.74
NDUFA4-202ENST00000463308 RIMBP2O15034 1052 aa10.43□□□□□ -0.74
NDUFA4-202ENST00000463308 ILDR1Q86SU0 546 aaPredicted RBP10.43□□□□□ -0.74
NDUFA4-202ENST00000463308 VARS2Q5ST30 1063 aaKnown RBP10.41□□□□□ -0.74
NDUFA4-202ENST00000463308 ZNF687Q8N1G0 1237 aa10.39□□□□□ -0.75
NDUFA4-202ENST00000463308 BOLA1Q9Y3E2 137 aa10.39□□□□□ -0.75
NDUFA4-202ENST00000463308 ZSWIM6Q9HCJ5 1215 aa10.34□□□□□ -0.75
NDUFA4-202ENST00000463308 PSEN1P49768 467 aa10.33□□□□□ -0.76
NDUFA4-202ENST00000463308 GSE1Q14687 1217 aa10.3□□□□□ -0.76
NDUFA4-202ENST00000463308 DPY19L2Q6NUT2 758 aa10.3□□□□□ -0.76
NDUFA4-202ENST00000463308 CHRM1P11229 460 aaPredicted RBP10.28□□□□□ -0.76
NDUFA4-202ENST00000463308 EHMT2Q96KQ7 1210 aa10.27□□□□□ -0.77
NDUFA4-202ENST00000463308 PLA2G2EQ9NZK7 142 aa10.27□□□□□ -0.77
NDUFA4-202ENST00000463308 PDAP1Q13442 181 aaKnown RBP10.24□□□□□ -0.77
NDUFA4-202ENST00000463308 ANKRD13DQ6ZTN6 518 aa10.24□□□□□ -0.77
NDUFA4-202ENST00000463308 GPR153Q6NV75 609 aa10.2□□□□□ -0.78
NDUFA4-202ENST00000463308 CABP2Q9NPB3 220 aa10.19□□□□□ -0.78
NDUFA4-202ENST00000463308 LSM11P83369 360 aaKnown RBP eCLIP10.18□□□□□ -0.78
NDUFA4-202ENST00000463308 HCSTQ9UBK5 93 aa10.18□□□□□ -0.78
NDUFA4-202ENST00000463308 ZNF316A6NFI3 1004 aaPredicted RBP10.11□□□□□ -0.79
NDUFA4-202ENST00000463308 PBX2P40425 430 aa10.11□□□□□ -0.79
NDUFA4-202ENST00000463308 FBXO3Q9UK99 471 aa10.07□□□□□ -0.8
NDUFA4-202ENST00000463308 ARSIQ5FYB1 569 aa10.06□□□□□ -0.8
NDUFA4-202ENST00000463308 MICALL2Q8IY33 904 aa10.06□□□□□ -0.8
NDUFA4-202ENST00000463308 TMEM92Q6UXU6 159 aa10.05□□□□□ -0.8
NDUFA4-202ENST00000463308 KLHL34Q8N239 644 aa10.05□□□□□ -0.8
NDUFA4-202ENST00000463308 RGS20O76081 388 aa10.02□□□□□ -0.81
NDUFA4-202ENST00000463308 IRX2Q9BZI1 471 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms