RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 TRIM41Q8WV44 630 aa8.03□□□□□ -1.12
GPNMB-205ENST00000463011 NBR1Q14596 966 aa8.02□□□□□ -1.13
GPNMB-205ENST00000463011 HS6ST3Q8IZP7 471 aa8.02□□□□□ -1.13
GPNMB-205ENST00000463011 HAX1O00165 279 aa8.01□□□□□ -1.13
GPNMB-205ENST00000463011 DNAJC5Q9H3Z4 198 aa8□□□□□ -1.13
GPNMB-205ENST00000463011 RNF25Q96BH1 459 aaPredicted RBP7.99□□□□□ -1.13
GPNMB-205ENST00000463011 GSE1Q14687 1217 aa7.98□□□□□ -1.13
GPNMB-205ENST00000463011 LHX8Q68G74 356 aa7.96□□□□□ -1.14
GPNMB-205ENST00000463011 NKX1-1Q15270 411 aaPredicted RBP7.95□□□□□ -1.14
GPNMB-205ENST00000463011 DCAF8Q5TAQ9 597 aa7.95□□□□□ -1.14
GPNMB-205ENST00000463011 NUBP1P53384 320 aa7.94□□□□□ -1.14
GPNMB-205ENST00000463011 RIOK3O14730 519 aaKnown RBP7.92□□□□□ -1.14
GPNMB-205ENST00000463011 GTPBP6O43824 516 aaPredicted RBP7.92□□□□□ -1.14
GPNMB-205ENST00000463011 STK25O00506 426 aa7.88□□□□□ -1.15
GPNMB-205ENST00000463011 PIP4P2Q8N4L2 257 aa7.88□□□□□ -1.15
GPNMB-205ENST00000463011 VGFO15240 615 aaPredicted RBP7.85□□□□□ -1.15
GPNMB-205ENST00000463011 EVX2Q03828 476 aa7.85□□□□□ -1.15
GPNMB-205ENST00000463011 FAM212AQ96EL1 285 aa7.84□□□□□ -1.15
GPNMB-205ENST00000463011 SPDYE1Q8NFV5 336 aaPredicted RBP7.82□□□□□ -1.16
GPNMB-205ENST00000463011 CREBZFQ9NS37 354 aa7.82□□□□□ -1.16
GPNMB-205ENST00000463011 CLEC11AQ9Y240 323 aa7.82□□□□□ -1.16
GPNMB-205ENST00000463011 STK24Q9Y6E0 443 aa7.82□□□□□ -1.16
GPNMB-205ENST00000463011 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.8□□□□□ -1.16
GPNMB-205ENST00000463011 PRR29P0C7W0 189 aa7.8□□□□□ -1.16
GPNMB-205ENST00000463011 CHRM1P11229 460 aaPredicted RBP7.8□□□□□ -1.16
GPNMB-205ENST00000463011 ZFP91Q96JP5 570 aaPredicted RBP7.8□□□□□ -1.16
GPNMB-205ENST00000463011 BCL11BQ9C0K0 894 aaPredicted RBP7.8□□□□□ -1.16
GPNMB-205ENST00000463011 TULP1O00294 542 aaPredicted RBP7.79□□□□□ -1.16
GPNMB-205ENST00000463011 MNX1P50219 401 aaPredicted RBP7.79□□□□□ -1.16
GPNMB-205ENST00000463011 RASEFQ8IZ41 740 aa7.79□□□□□ -1.16
GPNMB-205ENST00000463011 TIMELESSQ9UNS1 1208 aa7.79□□□□□ -1.16
GPNMB-205ENST00000463011 SGIP1Q9BQI5 828 aa7.78□□□□□ -1.16
GPNMB-205ENST00000463011 GTF3C3Q9Y5Q9 886 aa7.78□□□□□ -1.16
GPNMB-205ENST00000463011 PYGBP11216 843 aa7.77□□□□□ -1.17
GPNMB-205ENST00000463011 RYDENQ9NUL5 291 aaKnown RBP7.76□□□□□ -1.17
GPNMB-205ENST00000463011 AKT1S1Q96B36 256 aa7.74□□□□□ -1.17
GPNMB-205ENST00000463011 P3H3Q8IVL6 736 aa7.7□□□□□ -1.18
GPNMB-205ENST00000463011 REM2Q8IYK8 340 aaPredicted RBP7.7□□□□□ -1.18
GPNMB-205ENST00000463011 WDR70Q9NW82 654 aa7.69□□□□□ -1.18
GPNMB-205ENST00000463011 TMEM132AQ24JP5 1023 aa7.68□□□□□ -1.18
GPNMB-205ENST00000463011 CADPS2Q86UW7 1296 aa7.68□□□□□ -1.18
GPNMB-205ENST00000463011 FXR2P51116 673 aaKnown RBP eCLIP7.67□□□□□ -1.18
GPNMB-205ENST00000463011 KCNV2Q8TDN2 545 aa7.66□□□□□ -1.18
GPNMB-205ENST00000463011 LMOD2Q6P5Q4 547 aa7.65□□□□□ -1.18
GPNMB-205ENST00000463011 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.65□□□□□ -1.18
GPNMB-205ENST00000463011 TSPYL2Q9H2G4 693 aaPredicted RBP7.63□□□□□ -1.19
GPNMB-205ENST00000463011 ERICH6Q7L0X2 663 aa7.62□□□□□ -1.19
GPNMB-205ENST00000463011 ZNF467Q7Z7K2 595 aaPredicted RBP7.62□□□□□ -1.19
GPNMB-205ENST00000463011 PITPNM1O00562 1244 aa7.6□□□□□ -1.19
GPNMB-205ENST00000463011 GABBR2O75899 941 aa7.6□□□□□ -1.19
GPNMB-205ENST00000463011 PDAP1Q13442 181 aaKnown RBP7.6□□□□□ -1.19
GPNMB-205ENST00000463011 PCDHB8Q9UN66 801 aa7.6□□□□□ -1.19
GPNMB-205ENST00000463011 PCDHB13Q9Y5F0 798 aa7.6□□□□□ -1.19
GPNMB-205ENST00000463011 CHADLQ6NUI6 762 aa7.58□□□□□ -1.2
GPNMB-205ENST00000463011 C14orf37Q86TY3 774 aa7.57□□□□□ -1.2
GPNMB-205ENST00000463011 MFRPQ9BY79 579 aa7.57□□□□□ -1.2
GPNMB-205ENST00000463011 POTEMA6NI47 508 aa7.56□□□□□ -1.2
GPNMB-205ENST00000463011 PSEN1P49768 467 aa7.55□□□□□ -1.2
GPNMB-205ENST00000463011 PPP1R37O75864 691 aa7.54□□□□□ -1.2
GPNMB-205ENST00000463011 BRPF1P55201 1214 aaPredicted RBP7.53□□□□□ -1.2
GPNMB-205ENST00000463011 ARHGEF1Q92888 912 aaKnown RBP7.53□□□□□ -1.2
GPNMB-205ENST00000463011 ZC3H15Q8WU90 426 aaKnown RBP7.52□□□□□ -1.21
GPNMB-205ENST00000463011 ARXQ96QS3 562 aa7.52□□□□□ -1.21
GPNMB-205ENST00000463011 FARP1Q9Y4F1 1045 aaPredicted RBP7.52□□□□□ -1.21
GPNMB-205ENST00000463011 E2F4Q16254 413 aa7.51□□□□□ -1.21
GPNMB-205ENST00000463011 ZNF579Q8NAF0 562 aaKnown RBP7.51□□□□□ -1.21
GPNMB-205ENST00000463011 SEMA3EO15041 775 aa7.5□□□□□ -1.21
GPNMB-205ENST00000463011 POTEGQ6S5H5 508 aa7.5□□□□□ -1.21
GPNMB-205ENST00000463011 EFCAB3Q8N7B9 438 aa7.5□□□□□ -1.21
GPNMB-205ENST00000463011 NEUROD2Q15784 382 aa7.49□□□□□ -1.21
GPNMB-205ENST00000463011 SLC24A3Q9HC58 644 aa7.49□□□□□ -1.21
GPNMB-205ENST00000463011 CCDC61Q9Y6R9 512 aa7.49□□□□□ -1.21
GPNMB-205ENST00000463011 TESPA1A2RU30 521 aaPredicted RBP7.48□□□□□ -1.21
GPNMB-205ENST00000463011 NLRP6P59044 892 aa7.48□□□□□ -1.21
GPNMB-205ENST00000463011 CABP2Q9NPB3 220 aa7.48□□□□□ -1.21
GPNMB-205ENST00000463011 FBXO22Q8NEZ5 403 aa7.47□□□□□ -1.21
GPNMB-205ENST00000463011 PHF8Q9UPP1 1060 aa7.47□□□□□ -1.21
GPNMB-205ENST00000463011 C19orf67A6NJJ6 358 aa7.46□□□□□ -1.22
GPNMB-205ENST00000463011 SOX12O15370 315 aa7.46□□□□□ -1.22
GPNMB-205ENST00000463011 IFNL1Q8IU54 200 aa7.46□□□□□ -1.22
GPNMB-205ENST00000463011 POTEIP0CG38 1075 aa7.44□□□□□ -1.22
GPNMB-205ENST00000463011 MAP3K13O43283 966 aa7.43□□□□□ -1.22
GPNMB-205ENST00000463011 PRKAR2AP13861 404 aaKnown RBP7.43□□□□□ -1.22
GPNMB-205ENST00000463011 LARP6Q9BRS8 491 aaKnown RBP7.43□□□□□ -1.22
GPNMB-205ENST00000463011 PCDH10Q9P2E7 1040 aa7.43□□□□□ -1.22
GPNMB-205ENST00000463011 NCKAP5LQ9HCH0 1330 aa7.42□□□□□ -1.22
GPNMB-205ENST00000463011 ZMYND10O75800 440 aa7.41□□□□□ -1.22
GPNMB-205ENST00000463011 PDE4AP27815 886 aa7.41□□□□□ -1.22
GPNMB-205ENST00000463011 SMYD5Q6GMV2 418 aa7.41□□□□□ -1.22
GPNMB-205ENST00000463011 HOMEZQ8IX15 550 aa7.41□□□□□ -1.22
GPNMB-205ENST00000463011 PAK3O75914 559 aaPredicted RBP7.4□□□□□ -1.22
GPNMB-205ENST00000463011 KIF12Q96FN5 646 aa7.4□□□□□ -1.22
GPNMB-205ENST00000463011 SUPT5HO00267 1087 aaKnown RBP7.38□□□□□ -1.23
GPNMB-205ENST00000463011 MFSD10Q14728 455 aa7.37□□□□□ -1.23
GPNMB-205ENST00000463011 DDX27Q96GQ7 796 aaKnown RBP7.36□□□□□ -1.23
GPNMB-205ENST00000463011 MS4A4AQ96JQ5 239 aa7.36□□□□□ -1.23
GPNMB-205ENST00000463011 DAXXQ9UER7 740 aaPredicted RBP7.36□□□□□ -1.23
GPNMB-205ENST00000463011 BARGINQ6ZT62 677 aa7.35□□□□□ -1.23
GPNMB-205ENST00000463011 CRISPLD2Q9H0B8 497 aa7.35□□□□□ -1.23
GPNMB-205ENST00000463011 OTUD5Q96G74 571 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms