RNA–Protein interactions for RNA: ENST00000462489.1

CNOT11-203, Transcript of CCR4-NOT transcription complex subunit 11, humanhuman

TSL 2

Gene CNOT11, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11-203ENST00000462489 ZBTB47Q9UFB7 747 aaPredicted RBP8.32□□□□□ -1.08
CNOT11-203ENST00000462489 NPM1P06748 294 aaKnown RBP eCLIP8.27□□□□□ -1.09
CNOT11-203ENST00000462489 IFNLR1Q8IU57 520 aaPredicted RBP8.27□□□□□ -1.09
CNOT11-203ENST00000462489 PLSCR2Q9NRY7 297 aa8.26□□□□□ -1.09
CNOT11-203ENST00000462489 POTEJP0CG39 1038 aa8.24□□□□□ -1.09
CNOT11-203ENST00000462489 KLHL34Q8N239 644 aa8.22□□□□□ -1.09
CNOT11-203ENST00000462489 PAK3O75914 559 aaPredicted RBP8.21□□□□□ -1.1
CNOT11-203ENST00000462489 MS4A3Q96HJ5 214 aa8.21□□□□□ -1.1
CNOT11-203ENST00000462489 SPOCK2Q92563 424 aa8.2□□□□□ -1.1
CNOT11-203ENST00000462489 ATMINO43313 823 aaPredicted RBP8.19□□□□□ -1.1
CNOT11-203ENST00000462489 ASTLQ6HA08 431 aaPredicted RBP8.19□□□□□ -1.1
CNOT11-203ENST00000462489 NUBP1P53384 320 aa8.18□□□□□ -1.1
CNOT11-203ENST00000462489 TSPYL2Q9H2G4 693 aaPredicted RBP8.17□□□□□ -1.1
CNOT11-203ENST00000462489 POTEMA6NI47 508 aa8.16□□□□□ -1.1
CNOT11-203ENST00000462489 RASEFQ8IZ41 740 aa8.16□□□□□ -1.1
CNOT11-203ENST00000462489 METRNQ9UJH8 293 aa8.16□□□□□ -1.1
CNOT11-203ENST00000462489 CCDC61Q9Y6R9 512 aa8.15□□□□□ -1.1
CNOT11-203ENST00000462489 POTEGQ6S5H5 508 aa8.13□□□□□ -1.11
CNOT11-203ENST00000462489 C7P10643 843 aa8.11□□□□□ -1.11
CNOT11-203ENST00000462489 ATN1P54259 1190 aaPredicted RBP8.11□□□□□ -1.11
CNOT11-203ENST00000462489 LCE2DQ5TA82 110 aaPredicted RBP8.11□□□□□ -1.11
CNOT11-203ENST00000462489 FAM212AQ96EL1 285 aa8.11□□□□□ -1.11
CNOT11-203ENST00000462489 TRPC6Q9Y210 931 aa8.11□□□□□ -1.11
CNOT11-203ENST00000462489 POTEFA5A3E0 1075 aa8.1□□□□□ -1.11
CNOT11-203ENST00000462489 GSE1Q14687 1217 aa8.1□□□□□ -1.11
CNOT11-203ENST00000462489 SLC39A7Q92504 469 aa8.1□□□□□ -1.11
CNOT11-203ENST00000462489 KIF12Q96FN5 646 aa8.09□□□□□ -1.11
CNOT11-203ENST00000462489 DCAF8Q5TAQ9 597 aa8.06□□□□□ -1.12
CNOT11-203ENST00000462489 TRIM41Q8WV44 630 aa8.05□□□□□ -1.12
CNOT11-203ENST00000462489 BMP2KQ9NSY1 1161 aaPredicted RBP8.05□□□□□ -1.12
CNOT11-203ENST00000462489 MAP3K13O43283 966 aa8.04□□□□□ -1.12
CNOT11-203ENST00000462489 CHRM1P11229 460 aaPredicted RBP8.03□□□□□ -1.12
CNOT11-203ENST00000462489 AMER1Q5JTC6 1135 aaPredicted RBP8.03□□□□□ -1.12
CNOT11-203ENST00000462489 CIZ1Q9ULV3 898 aaPredicted RBP8.02□□□□□ -1.13
CNOT11-203ENST00000462489 FAM163AQ96GL9 167 aaPredicted RBP8.01□□□□□ -1.13
CNOT11-203ENST00000462489 MAMSTRQ6ZN01 415 aa8□□□□□ -1.13
CNOT11-203ENST00000462489 COLQQ9Y215 455 aaPredicted RBP8□□□□□ -1.13
CNOT11-203ENST00000462489 PKD2Q13563 968 aa7.99□□□□□ -1.13
CNOT11-203ENST00000462489 SGIP1Q9BQI5 828 aa7.99□□□□□ -1.13
CNOT11-203ENST00000462489 TTLL13PA6NNM8 815 aa7.96□□□□□ -1.14
CNOT11-203ENST00000462489 TIE1P35590 1138 aa7.96□□□□□ -1.14
CNOT11-203ENST00000462489 PCDH10Q9P2E7 1040 aa7.96□□□□□ -1.14
CNOT11-203ENST00000462489 SCUBE2Q9NQ36 999 aa7.95□□□□□ -1.14
CNOT11-203ENST00000462489 PCDHB13Q9Y5F0 798 aa7.95□□□□□ -1.14
CNOT11-203ENST00000462489 PYGBP11216 843 aa7.94□□□□□ -1.14
CNOT11-203ENST00000462489 IFNL1Q8IU54 200 aa7.94□□□□□ -1.14
CNOT11-203ENST00000462489 RTN4Q9NQC3 1192 aaKnown RBP7.94□□□□□ -1.14
CNOT11-203ENST00000462489 ECM2O94769 699 aaPredicted RBP7.93□□□□□ -1.14
CNOT11-203ENST00000462489 ZNF467Q7Z7K2 595 aaPredicted RBP7.9□□□□□ -1.14
CNOT11-203ENST00000462489 TRIM35Q9UPQ4 493 aa7.9□□□□□ -1.14
CNOT11-203ENST00000462489 SEC24BO95487 1268 aa7.87□□□□□ -1.15
CNOT11-203ENST00000462489 RIOK3O14730 519 aaKnown RBP7.86□□□□□ -1.15
CNOT11-203ENST00000462489 RNF25Q96BH1 459 aaPredicted RBP7.86□□□□□ -1.15
CNOT11-203ENST00000462489 TAOK2Q9UL54 1235 aa7.86□□□□□ -1.15
CNOT11-203ENST00000462489 PCDHB8Q9UN66 801 aa7.86□□□□□ -1.15
CNOT11-203ENST00000462489 RGL2O15211 777 aa7.85□□□□□ -1.15
CNOT11-203ENST00000462489 IER5LQ5T953 404 aa7.84□□□□□ -1.15
CNOT11-203ENST00000462489 TMEM106CQ9BVX2 250 aa7.84□□□□□ -1.15
CNOT11-203ENST00000462489 VGFO15240 615 aaPredicted RBP7.83□□□□□ -1.16
CNOT11-203ENST00000462489 PDAP1Q13442 181 aaKnown RBP7.82□□□□□ -1.16
CNOT11-203ENST00000462489 CDAN1Q8IWY9 1227 aa7.82□□□□□ -1.16
CNOT11-203ENST00000462489 ST18O60284 1047 aa7.81□□□□□ -1.16
CNOT11-203ENST00000462489 SLAIN1Q8ND83 568 aa7.8□□□□□ -1.16
CNOT11-203ENST00000462489 PSEN1P49768 467 aa7.79□□□□□ -1.16
CNOT11-203ENST00000462489 IRX5P78411 483 aaPredicted RBP7.79□□□□□ -1.16
CNOT11-203ENST00000462489 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.75□□□□□ -1.17
CNOT11-203ENST00000462489 ZFP91Q96JP5 570 aaPredicted RBP7.75□□□□□ -1.17
CNOT11-203ENST00000462489 HS6ST3Q8IZP7 471 aa7.74□□□□□ -1.17
CNOT11-203ENST00000462489 PLCG2P16885 1265 aa7.73□□□□□ -1.17
CNOT11-203ENST00000462489 DNAJC5Q9H3Z4 198 aa7.73□□□□□ -1.17
CNOT11-203ENST00000462489 STK25O00506 426 aa7.71□□□□□ -1.18
CNOT11-203ENST00000462489 OCEL1Q9H607 264 aa7.71□□□□□ -1.18
CNOT11-203ENST00000462489 BCL11BQ9C0K0 894 aaPredicted RBP7.7□□□□□ -1.18
CNOT11-203ENST00000462489 CHGAP10645 457 aaKnown RBP7.69□□□□□ -1.18
CNOT11-203ENST00000462489 DCAF8L2P0C7V8 631 aa7.68□□□□□ -1.18
CNOT11-203ENST00000462489 STK24Q9Y6E0 443 aa7.68□□□□□ -1.18
CNOT11-203ENST00000462489 GOLGA2Q08379 1002 aa7.67□□□□□ -1.18
CNOT11-203ENST00000462489 PDCD7Q8N8D1 485 aaKnown RBP7.67□□□□□ -1.18
CNOT11-203ENST00000462489 MARVELD3Q96A59 401 aa7.67□□□□□ -1.18
CNOT11-203ENST00000462489 SOX12O15370 315 aa7.66□□□□□ -1.18
CNOT11-203ENST00000462489 SPNS2Q8IVW8 549 aa7.66□□□□□ -1.18
CNOT11-203ENST00000462489 CABP2Q9NPB3 220 aa7.66□□□□□ -1.18
CNOT11-203ENST00000462489 MKRN3Q13064 507 aaKnown RBP7.65□□□□□ -1.18
CNOT11-203ENST00000462489 MMRN1Q13201 1228 aa7.65□□□□□ -1.18
CNOT11-203ENST00000462489 ILDR1Q86SU0 546 aaPredicted RBP7.65□□□□□ -1.18
CNOT11-203ENST00000462489 EFCAB3Q8N7B9 438 aa7.63□□□□□ -1.19
CNOT11-203ENST00000462489 BBXQ8WY36 941 aaPredicted RBP7.63□□□□□ -1.19
CNOT11-203ENST00000462489 POTEB3A0JP26 581 aa7.62□□□□□ -1.19
CNOT11-203ENST00000462489 POTEBQ6S5H4 581 aa7.62□□□□□ -1.19
CNOT11-203ENST00000462489 TMEM121BQ9BXQ6 578 aaPredicted RBP7.62□□□□□ -1.19
CNOT11-203ENST00000462489 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.62□□□□□ -1.19
CNOT11-203ENST00000462489 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.62□□□□□ -1.19
CNOT11-203ENST00000462489 DPY19L2Q6NUT2 758 aa7.6□□□□□ -1.19
CNOT11-203ENST00000462489 NLRP6P59044 892 aa7.59□□□□□ -1.19
CNOT11-203ENST00000462489 NKX1-1Q15270 411 aaPredicted RBP7.59□□□□□ -1.19
CNOT11-203ENST00000462489 RYDENQ9NUL5 291 aaKnown RBP7.59□□□□□ -1.19
CNOT11-203ENST00000462489 FBXO22Q8NEZ5 403 aa7.58□□□□□ -1.2
CNOT11-203ENST00000462489 MFRPQ9BY79 579 aa7.58□□□□□ -1.2
CNOT11-203ENST00000462489 SNPHO15079 494 aa7.57□□□□□ -1.2
CNOT11-203ENST00000462489 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms