RNA–Protein interactions for RNA: ENST00000462309.1

COL4A2-203, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-203ENST00000462309 CHGAP10645 457 aaKnown RBP17.58■□□□□ 0.4
COL4A2-203ENST00000462309 HAX1O00165 279 aa17.57■□□□□ 0.4
COL4A2-203ENST00000462309 MNX1P50219 401 aaPredicted RBP17.57■□□□□ 0.4
COL4A2-203ENST00000462309 SPRYD3Q8NCJ5 442 aa17.55■□□□□ 0.4
COL4A2-203ENST00000462309 RNF25Q96BH1 459 aaPredicted RBP17.52■□□□□ 0.4
COL4A2-203ENST00000462309 DCAF8Q5TAQ9 597 aa17.51■□□□□ 0.39
COL4A2-203ENST00000462309 KDM2AQ9Y2K7 1162 aa17.51■□□□□ 0.39
COL4A2-203ENST00000462309 HS6ST3Q8IZP7 471 aa17.49■□□□□ 0.39
COL4A2-203ENST00000462309 PIP4P2Q8N4L2 257 aa17.48■□□□□ 0.39
COL4A2-203ENST00000462309 DNAJC5Q9H3Z4 198 aa17.45■□□□□ 0.38
COL4A2-203ENST00000462309 BCANQ96GW7 911 aa17.43■□□□□ 0.38
COL4A2-203ENST00000462309 FAM212AQ96EL1 285 aa17.42■□□□□ 0.38
COL4A2-203ENST00000462309 TSHZ2Q9NRE2 1034 aa17.4■□□□□ 0.38
COL4A2-203ENST00000462309 PITPNM1O00562 1244 aa17.39■□□□□ 0.37
COL4A2-203ENST00000462309 RIOK3O14730 519 aaKnown RBP17.39■□□□□ 0.37
COL4A2-203ENST00000462309 CHRM1P11229 460 aaPredicted RBP17.39■□□□□ 0.37
COL4A2-203ENST00000462309 RASEFQ8IZ41 740 aa17.37■□□□□ 0.37
COL4A2-203ENST00000462309 TAOK2Q9UL54 1235 aa17.36■□□□□ 0.37
COL4A2-203ENST00000462309 VGFO15240 615 aaPredicted RBP17.27■□□□□ 0.36
COL4A2-203ENST00000462309 NKX1-1Q15270 411 aaPredicted RBP17.25■□□□□ 0.35
COL4A2-203ENST00000462309 SGIP1Q9BQI5 828 aa17.25■□□□□ 0.35
COL4A2-203ENST00000462309 STK25O00506 426 aa17.19■□□□□ 0.34
COL4A2-203ENST00000462309 GTPBP6O43824 516 aaPredicted RBP17.18■□□□□ 0.34
COL4A2-203ENST00000462309 PYGBP11216 843 aa17.17■□□□□ 0.34
COL4A2-203ENST00000462309 FXR2P51116 673 aaKnown RBP eCLIP17.17■□□□□ 0.34
COL4A2-203ENST00000462309 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.12■□□□□ 0.33
COL4A2-203ENST00000462309 CHADLQ6NUI6 762 aa17.12■□□□□ 0.33
COL4A2-203ENST00000462309 ZFP91Q96JP5 570 aaPredicted RBP17.12■□□□□ 0.33
COL4A2-203ENST00000462309 EVX2Q03828 476 aa17.09■□□□□ 0.33
COL4A2-203ENST00000462309 BCL11BQ9C0K0 894 aaPredicted RBP17.08■□□□□ 0.32
COL4A2-203ENST00000462309 FARP1Q9Y4F1 1045 aaPredicted RBP17.07■□□□□ 0.32
COL4A2-203ENST00000462309 STK24Q9Y6E0 443 aa17.06■□□□□ 0.32
COL4A2-203ENST00000462309 PRKCSHP14314 528 aaPredicted RBP17.05■□□□□ 0.32
COL4A2-203ENST00000462309 TSPYL2Q9H2G4 693 aaPredicted RBP17.02■□□□□ 0.32
COL4A2-203ENST00000462309 LHX8Q68G74 356 aa17.01■□□□□ 0.31
COL4A2-203ENST00000462309 RYDENQ9NUL5 291 aaKnown RBP16.97■□□□□ 0.31
COL4A2-203ENST00000462309 ZNF467Q7Z7K2 595 aaPredicted RBP16.96■□□□□ 0.31
COL4A2-203ENST00000462309 PLSCR2Q9NRY7 297 aa16.96■□□□□ 0.31
COL4A2-203ENST00000462309 PRKAR2AP13861 404 aaKnown RBP16.95■□□□□ 0.3
COL4A2-203ENST00000462309 CCDC61Q9Y6R9 512 aa16.91■□□□□ 0.3
COL4A2-203ENST00000462309 PDAP1Q13442 181 aaKnown RBP16.88■□□□□ 0.29
COL4A2-203ENST00000462309 TPRNQ4KMQ1 711 aa16.88■□□□□ 0.29
COL4A2-203ENST00000462309 PCDHB8Q9UN66 801 aa16.85■□□□□ 0.29
COL4A2-203ENST00000462309 PCDHB13Q9Y5F0 798 aa16.85■□□□□ 0.29
COL4A2-203ENST00000462309 ZNF579Q8NAF0 562 aaKnown RBP16.83■□□□□ 0.28
COL4A2-203ENST00000462309 NBR1Q14596 966 aa16.82■□□□□ 0.28
COL4A2-203ENST00000462309 PSEN1P49768 467 aa16.77■□□□□ 0.28
COL4A2-203ENST00000462309 GABBR2O75899 941 aa16.73■□□□□ 0.27
COL4A2-203ENST00000462309 PAK3O75914 559 aaPredicted RBP16.72■□□□□ 0.27
COL4A2-203ENST00000462309 KIF12Q96FN5 646 aa16.7■□□□□ 0.26
COL4A2-203ENST00000462309 IFNL1Q8IU54 200 aa16.69■□□□□ 0.26
COL4A2-203ENST00000462309 MFRPQ9BY79 579 aa16.69■□□□□ 0.26
COL4A2-203ENST00000462309 C19orf67A6NJJ6 358 aa16.67■□□□□ 0.26
COL4A2-203ENST00000462309 MAP3K13O43283 966 aa16.67■□□□□ 0.26
COL4A2-203ENST00000462309 CADPS2Q86UW7 1296 aa16.65■□□□□ 0.26
COL4A2-203ENST00000462309 EFCAB3Q8N7B9 438 aa16.57■□□□□ 0.24
COL4A2-203ENST00000462309 SOX12O15370 315 aa16.56■□□□□ 0.24
COL4A2-203ENST00000462309 FBXO22Q8NEZ5 403 aa16.56■□□□□ 0.24
COL4A2-203ENST00000462309 P3H3Q8IVL6 736 aa16.55■□□□□ 0.24
COL4A2-203ENST00000462309 CABP2Q9NPB3 220 aa16.54■□□□□ 0.24
COL4A2-203ENST00000462309 ZRANB1Q9UGI0 708 aa16.54■□□□□ 0.24
COL4A2-203ENST00000462309 PPP1R37O75864 691 aa16.53■□□□□ 0.24
COL4A2-203ENST00000462309 NLRP6P59044 892 aa16.53■□□□□ 0.24
COL4A2-203ENST00000462309 WDR70Q9NW82 654 aa16.53■□□□□ 0.24
COL4A2-203ENST00000462309 CD44P16070 742 aaKnown RBP16.5■□□□□ 0.23
COL4A2-203ENST00000462309 PHF8Q9UPP1 1060 aa16.49■□□□□ 0.23
COL4A2-203ENST00000462309 KCNV2Q8TDN2 545 aa16.46■□□□□ 0.23
COL4A2-203ENST00000462309 PHF12Q96QT6 1004 aa16.46■□□□□ 0.23
COL4A2-203ENST00000462309 MS4A4AQ96JQ5 239 aa16.35■□□□□ 0.21
COL4A2-203ENST00000462309 TMEM106CQ9BVX2 250 aa16.32■□□□□ 0.2
COL4A2-203ENST00000462309 ARHGEF1Q92888 912 aaKnown RBP16.3■□□□□ 0.2
COL4A2-203ENST00000462309 MS4A3Q96HJ5 214 aa16.3■□□□□ 0.2
COL4A2-203ENST00000462309 TRPC6Q9Y210 931 aa16.3■□□□□ 0.2
COL4A2-203ENST00000462309 E2F4Q16254 413 aa16.29■□□□□ 0.2
COL4A2-203ENST00000462309 POTEIP0CG38 1075 aa16.28■□□□□ 0.2
COL4A2-203ENST00000462309 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.27■□□□□ 0.2
COL4A2-203ENST00000462309 NCKAP5LQ9HCH0 1330 aa16.26■□□□□ 0.19
COL4A2-203ENST00000462309 GOLGA2Q08379 1002 aa16.25■□□□□ 0.19
COL4A2-203ENST00000462309 PDE4AP27815 886 aa16.23■□□□□ 0.19
COL4A2-203ENST00000462309 MFSD10Q14728 455 aa16.21■□□□□ 0.19
COL4A2-203ENST00000462309 LMOD2Q6P5Q4 547 aa16.21■□□□□ 0.19
COL4A2-203ENST00000462309 TIE1P35590 1138 aa16.2■□□□□ 0.18
COL4A2-203ENST00000462309 MKRN3Q13064 507 aaKnown RBP16.2■□□□□ 0.18
COL4A2-203ENST00000462309 LARP6Q9BRS8 491 aaKnown RBP16.2■□□□□ 0.18
COL4A2-203ENST00000462309 CRISPLD2Q9H0B8 497 aa16.2■□□□□ 0.18
COL4A2-203ENST00000462309 ILDR1Q86SU0 546 aaPredicted RBP16.19■□□□□ 0.18
COL4A2-203ENST00000462309 CLCN6P51797 869 aa16.18■□□□□ 0.18
COL4A2-203ENST00000462309 TTLL13PA6NNM8 815 aa16.15■□□□□ 0.18
COL4A2-203ENST00000462309 DCBLD2Q96PD2 775 aa16.15■□□□□ 0.18
COL4A2-203ENST00000462309 TESPA1A2RU30 521 aaPredicted RBP16.12■□□□□ 0.17
COL4A2-203ENST00000462309 ARIH1Q9Y4X5 557 aaPredicted RBP16.12■□□□□ 0.17
COL4A2-203ENST00000462309 BMP2KQ9NSY1 1161 aaPredicted RBP16.11■□□□□ 0.17
COL4A2-203ENST00000462309 TULP1O00294 542 aaPredicted RBP16.1■□□□□ 0.17
COL4A2-203ENST00000462309 SEMA3EO15041 775 aa16.1■□□□□ 0.17
COL4A2-203ENST00000462309 DDX27Q96GQ7 796 aaKnown RBP16.1■□□□□ 0.17
COL4A2-203ENST00000462309 POTEMA6NI47 508 aa16.08■□□□□ 0.16
COL4A2-203ENST00000462309 CAMK2BQ13554 666 aa16.08■□□□□ 0.16
COL4A2-203ENST00000462309 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.07■□□□□ 0.16
COL4A2-203ENST00000462309 GALR2O43603 387 aaPredicted RBP16.04■□□□□ 0.16
COL4A2-203ENST00000462309 TRIM35Q9UPQ4 493 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms