RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 CHRM1P11229 460 aaPredicted RBP11.31□□□□□ -0.6
COPS3-204ENST00000462236 CHADLQ6NUI6 762 aa11.31□□□□□ -0.6
COPS3-204ENST00000462236 RASEFQ8IZ41 740 aa11.3□□□□□ -0.6
COPS3-204ENST00000462236 RGL2O15211 777 aa11.29□□□□□ -0.6
COPS3-204ENST00000462236 PIP4P2Q8N4L2 257 aa11.27□□□□□ -0.61
COPS3-204ENST00000462236 TAOK2Q9UL54 1235 aa11.27□□□□□ -0.61
COPS3-204ENST00000462236 CCDC180Q9P1Z9 1646 aa11.23□□□□□ -0.61
COPS3-204ENST00000462236 BBXQ8WY36 941 aaPredicted RBP11.21□□□□□ -0.61
COPS3-204ENST00000462236 RIOK3O14730 519 aaKnown RBP11.19□□□□□ -0.62
COPS3-204ENST00000462236 PLCB2Q00722 1185 aa11.18□□□□□ -0.62
COPS3-204ENST00000462236 PAK3O75914 559 aaPredicted RBP11.17□□□□□ -0.62
COPS3-204ENST00000462236 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.17□□□□□ -0.62
COPS3-204ENST00000462236 RNF25Q96BH1 459 aaPredicted RBP11.16□□□□□ -0.62
COPS3-204ENST00000462236 VGFO15240 615 aaPredicted RBP11.14□□□□□ -0.63
COPS3-204ENST00000462236 HS6ST3Q8IZP7 471 aa11.14□□□□□ -0.63
COPS3-204ENST00000462236 SGIP1Q9BQI5 828 aa11.14□□□□□ -0.63
COPS3-204ENST00000462236 TSPYL2Q9H2G4 693 aaPredicted RBP11.14□□□□□ -0.63
COPS3-204ENST00000462236 DNAJC5Q9H3Z4 198 aa11.13□□□□□ -0.63
COPS3-204ENST00000462236 CHGAP10645 457 aaKnown RBP11.12□□□□□ -0.63
COPS3-204ENST00000462236 PYGBP11216 843 aa11.12□□□□□ -0.63
COPS3-204ENST00000462236 CCDC61Q9Y6R9 512 aa11.12□□□□□ -0.63
COPS3-204ENST00000462236 ZNF467Q7Z7K2 595 aaPredicted RBP11.1□□□□□ -0.63
COPS3-204ENST00000462236 CD44P16070 742 aaKnown RBP11.03□□□□□ -0.64
COPS3-204ENST00000462236 ZNF579Q8NAF0 562 aaKnown RBP11.03□□□□□ -0.64
COPS3-204ENST00000462236 STK25O00506 426 aa11.01□□□□□ -0.65
COPS3-204ENST00000462236 SPRYD3Q8NCJ5 442 aa11.01□□□□□ -0.65
COPS3-204ENST00000462236 PDAP1Q13442 181 aaKnown RBP11□□□□□ -0.65
COPS3-204ENST00000462236 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.99□□□□□ -0.65
COPS3-204ENST00000462236 C19orf67A6NJJ6 358 aa10.99□□□□□ -0.65
COPS3-204ENST00000462236 KIF12Q96FN5 646 aa10.99□□□□□ -0.65
COPS3-204ENST00000462236 ZFP91Q96JP5 570 aaPredicted RBP10.99□□□□□ -0.65
COPS3-204ENST00000462236 ZRANB1Q9UGI0 708 aa10.99□□□□□ -0.65
COPS3-204ENST00000462236 PAXIP1Q6ZW49 1069 aaPredicted RBP10.98□□□□□ -0.65
COPS3-204ENST00000462236 PCDHB13Q9Y5F0 798 aa10.97□□□□□ -0.65
COPS3-204ENST00000462236 BCL11BQ9C0K0 894 aaPredicted RBP10.96□□□□□ -0.65
COPS3-204ENST00000462236 RYDENQ9NUL5 291 aaKnown RBP10.96□□□□□ -0.65
COPS3-204ENST00000462236 HAP1P54257 671 aaPredicted RBP10.95□□□□□ -0.66
COPS3-204ENST00000462236 MAP3K13O43283 966 aa10.94□□□□□ -0.66
COPS3-204ENST00000462236 CFAP44Q96MT7 982 aa10.94□□□□□ -0.66
COPS3-204ENST00000462236 PCDHB8Q9UN66 801 aa10.94□□□□□ -0.66
COPS3-204ENST00000462236 STK24Q9Y6E0 443 aa10.94□□□□□ -0.66
COPS3-204ENST00000462236 CLCN6P51797 869 aa10.92□□□□□ -0.66
COPS3-204ENST00000462236 IFNL1Q8IU54 200 aa10.92□□□□□ -0.66
COPS3-204ENST00000462236 PSEN1P49768 467 aa10.91□□□□□ -0.66
COPS3-204ENST00000462236 VSIG10Q8N0Z9 540 aa10.91□□□□□ -0.66
COPS3-204ENST00000462236 NKX1-1Q15270 411 aaPredicted RBP10.89□□□□□ -0.67
COPS3-204ENST00000462236 PHF12Q96QT6 1004 aa10.87□□□□□ -0.67
COPS3-204ENST00000462236 GTPBP6O43824 516 aaPredicted RBP10.86□□□□□ -0.67
COPS3-204ENST00000462236 HAX1O00165 279 aa10.82□□□□□ -0.68
COPS3-204ENST00000462236 SOX12O15370 315 aa10.78□□□□□ -0.68
COPS3-204ENST00000462236 MS4A3Q96HJ5 214 aa10.78□□□□□ -0.68
COPS3-204ENST00000462236 TSHZ2Q9NRE2 1034 aa10.77□□□□□ -0.69
COPS3-204ENST00000462236 TIE1P35590 1138 aa10.76□□□□□ -0.69
COPS3-204ENST00000462236 RB1CC1Q8TDY2 1594 aa10.74□□□□□ -0.69
COPS3-204ENST00000462236 CABP2Q9NPB3 220 aa10.74□□□□□ -0.69
COPS3-204ENST00000462236 NLRP6P59044 892 aa10.73□□□□□ -0.69
COPS3-204ENST00000462236 TMEM106CQ9BVX2 250 aa10.73□□□□□ -0.69
COPS3-204ENST00000462236 MFRPQ9BY79 579 aa10.72□□□□□ -0.69
COPS3-204ENST00000462236 GOLGA2Q08379 1002 aa10.71□□□□□ -0.69
COPS3-204ENST00000462236 EFCAB3Q8N7B9 438 aa10.71□□□□□ -0.69
COPS3-204ENST00000462236 KDM2AQ9Y2K7 1162 aa10.7□□□□□ -0.7
COPS3-204ENST00000462236 EVX2Q03828 476 aa10.68□□□□□ -0.7
COPS3-204ENST00000462236 FBXO22Q8NEZ5 403 aa10.68□□□□□ -0.7
COPS3-204ENST00000462236 UNC13AQ9UPW8 1703 aa10.67□□□□□ -0.7
COPS3-204ENST00000462236 TTLL13PA6NNM8 815 aa10.67□□□□□ -0.7
COPS3-204ENST00000462236 GALR2O43603 387 aaPredicted RBP10.66□□□□□ -0.7
COPS3-204ENST00000462236 MKRN3Q13064 507 aaKnown RBP10.66□□□□□ -0.7
COPS3-204ENST00000462236 TRPC6Q9Y210 931 aa10.66□□□□□ -0.7
COPS3-204ENST00000462236 BMP2KQ9NSY1 1161 aaPredicted RBP10.65□□□□□ -0.7
COPS3-204ENST00000462236 PHF8Q9UPP1 1060 aa10.63□□□□□ -0.71
COPS3-204ENST00000462236 NACADO15069 1562 aa10.62□□□□□ -0.71
COPS3-204ENST00000462236 ILDR1Q86SU0 546 aaPredicted RBP10.61□□□□□ -0.71
COPS3-204ENST00000462236 BCANQ96GW7 911 aa10.6□□□□□ -0.71
COPS3-204ENST00000462236 ASTLQ6HA08 431 aaPredicted RBP10.59□□□□□ -0.71
COPS3-204ENST00000462236 GABBR2O75899 941 aa10.58□□□□□ -0.72
COPS3-204ENST00000462236 TRIM35Q9UPQ4 493 aa10.58□□□□□ -0.72
COPS3-204ENST00000462236 IER5LQ5T953 404 aa10.57□□□□□ -0.72
COPS3-204ENST00000462236 ATMINO43313 823 aaPredicted RBP10.56□□□□□ -0.72
COPS3-204ENST00000462236 MS4A4AQ96JQ5 239 aa10.56□□□□□ -0.72
COPS3-204ENST00000462236 PPP1R37O75864 691 aa10.54□□□□□ -0.72
COPS3-204ENST00000462236 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.54□□□□□ -0.72
COPS3-204ENST00000462236 ATN1P54259 1190 aaPredicted RBP10.53□□□□□ -0.72
COPS3-204ENST00000462236 BICRAQ9NZM4 1560 aa10.52□□□□□ -0.73
COPS3-204ENST00000462236 CADPS2Q86UW7 1296 aa10.49□□□□□ -0.73
COPS3-204ENST00000462236 DCBLD2Q96PD2 775 aa10.49□□□□□ -0.73
COPS3-204ENST00000462236 WDR70Q9NW82 654 aa10.49□□□□□ -0.73
COPS3-204ENST00000462236 P3H3Q8IVL6 736 aa10.48□□□□□ -0.73
COPS3-204ENST00000462236 OCEL1Q9H607 264 aa10.48□□□□□ -0.73
COPS3-204ENST00000462236 IRX5P78411 483 aaPredicted RBP10.47□□□□□ -0.73
COPS3-204ENST00000462236 PDE4AP27815 886 aa10.45□□□□□ -0.74
COPS3-204ENST00000462236 PDCD7Q8N8D1 485 aaKnown RBP10.45□□□□□ -0.74
COPS3-204ENST00000462236 SP7Q8TDD2 431 aaPredicted RBP10.45□□□□□ -0.74
COPS3-204ENST00000462236 MYO15BQ96JP2 1530 aa10.43□□□□□ -0.74
COPS3-204ENST00000462236 SLC39A7Q92504 469 aa10.42□□□□□ -0.74
COPS3-204ENST00000462236 C7P10643 843 aa10.41□□□□□ -0.74
COPS3-204ENST00000462236 PLCG2P16885 1265 aa10.41□□□□□ -0.74
COPS3-204ENST00000462236 NBR1Q14596 966 aa10.41□□□□□ -0.74
COPS3-204ENST00000462236 CRISPLD2Q9H0B8 497 aa10.41□□□□□ -0.74
COPS3-204ENST00000462236 MFSD10Q14728 455 aa10.4□□□□□ -0.74
COPS3-204ENST00000462236 L3MBTL3Q96JM7 780 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms