RNA–Protein interactions for RNA: ENST00000462063.1

CCDC30-204, Transcript of coiled-coil domain containing 30, humanhuman

TSL 3

Gene CCDC30, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-204ENST00000462063 TSPYL2Q9H2G4 693 aaPredicted RBP10.79□□□□□ -0.68
CCDC30-204ENST00000462063 METRNQ9UJH8 293 aa10.74□□□□□ -0.69
CCDC30-204ENST00000462063 ASTLQ6HA08 431 aaPredicted RBP10.73□□□□□ -0.69
CCDC30-204ENST00000462063 ATMINO43313 823 aaPredicted RBP10.72□□□□□ -0.69
CCDC30-204ENST00000462063 PROM2Q8N271 834 aa10.7□□□□□ -0.7
CCDC30-204ENST00000462063 SLC39A7Q92504 469 aa10.7□□□□□ -0.7
CCDC30-204ENST00000462063 C7P10643 843 aa10.69□□□□□ -0.7
CCDC30-204ENST00000462063 LCE2DQ5TA82 110 aaPredicted RBP10.67□□□□□ -0.7
CCDC30-204ENST00000462063 CCDC61Q9Y6R9 512 aa10.67□□□□□ -0.7
CCDC30-204ENST00000462063 PLEKHG5O94827 1062 aa10.66□□□□□ -0.7
CCDC30-204ENST00000462063 MIER1Q8N108 512 aa10.66□□□□□ -0.7
CCDC30-204ENST00000462063 ATN1P54259 1190 aaPredicted RBP10.64□□□□□ -0.71
CCDC30-204ENST00000462063 POTEJP0CG39 1038 aa10.63□□□□□ -0.71
CCDC30-204ENST00000462063 KIF12Q96FN5 646 aa10.63□□□□□ -0.71
CCDC30-204ENST00000462063 MAMSTRQ6ZN01 415 aa10.61□□□□□ -0.71
CCDC30-204ENST00000462063 MAP3K13O43283 966 aa10.59□□□□□ -0.71
CCDC30-204ENST00000462063 TRPC6Q9Y210 931 aa10.59□□□□□ -0.71
CCDC30-204ENST00000462063 RASEFQ8IZ41 740 aa10.58□□□□□ -0.72
CCDC30-204ENST00000462063 BMP2KQ9NSY1 1161 aaPredicted RBP10.58□□□□□ -0.72
CCDC30-204ENST00000462063 SCUBE2Q9NQ36 999 aa10.57□□□□□ -0.72
CCDC30-204ENST00000462063 PLCD3Q8N3E9 789 aa10.56□□□□□ -0.72
CCDC30-204ENST00000462063 FAM163AQ96GL9 167 aaPredicted RBP10.53□□□□□ -0.72
CCDC30-204ENST00000462063 TIE1P35590 1138 aa10.52□□□□□ -0.73
CCDC30-204ENST00000462063 POTEFA5A3E0 1075 aa10.51□□□□□ -0.73
CCDC30-204ENST00000462063 SEC24BO95487 1268 aa10.49□□□□□ -0.73
CCDC30-204ENST00000462063 TTLL13PA6NNM8 815 aa10.48□□□□□ -0.73
CCDC30-204ENST00000462063 PCDHB13Q9Y5F0 798 aa10.46□□□□□ -0.73
CCDC30-204ENST00000462063 COLQQ9Y215 455 aaPredicted RBP10.45□□□□□ -0.74
CCDC30-204ENST00000462063 ZBTB47Q9UFB7 747 aaPredicted RBP10.43□□□□□ -0.74
CCDC30-204ENST00000462063 TRIM35Q9UPQ4 493 aa10.43□□□□□ -0.74
CCDC30-204ENST00000462063 NUBP1P53384 320 aa10.4□□□□□ -0.74
CCDC30-204ENST00000462063 SGIP1Q9BQI5 828 aa10.4□□□□□ -0.74
CCDC30-204ENST00000462063 IFNL1Q8IU54 200 aa10.38□□□□□ -0.75
CCDC30-204ENST00000462063 FAM212AQ96EL1 285 aa10.37□□□□□ -0.75
CCDC30-204ENST00000462063 IER5LQ5T953 404 aa10.36□□□□□ -0.75
CCDC30-204ENST00000462063 FKBP8Q14318 412 aa10.35□□□□□ -0.75
CCDC30-204ENST00000462063 CDAN1Q8IWY9 1227 aa10.35□□□□□ -0.75
CCDC30-204ENST00000462063 TMEM106CQ9BVX2 250 aa10.35□□□□□ -0.75
CCDC30-204ENST00000462063 PLCG2P16885 1265 aa10.31□□□□□ -0.76
CCDC30-204ENST00000462063 SLAIN1Q8ND83 568 aa10.31□□□□□ -0.76
CCDC30-204ENST00000462063 DCAF8Q5TAQ9 597 aa10.29□□□□□ -0.76
CCDC30-204ENST00000462063 PYGBP11216 843 aa10.27□□□□□ -0.77
CCDC30-204ENST00000462063 MMRN1Q13201 1228 aa10.26□□□□□ -0.77
CCDC30-204ENST00000462063 ST18O60284 1047 aa10.22□□□□□ -0.77
CCDC30-204ENST00000462063 IRX5P78411 483 aaPredicted RBP10.22□□□□□ -0.77
CCDC30-204ENST00000462063 PCDHB8Q9UN66 801 aa10.21□□□□□ -0.77
CCDC30-204ENST00000462063 OCEL1Q9H607 264 aa10.2□□□□□ -0.78
CCDC30-204ENST00000462063 FBXO3Q9UK99 471 aa10.17□□□□□ -0.78
CCDC30-204ENST00000462063 SPNS2Q8IVW8 549 aa10.15□□□□□ -0.78
CCDC30-204ENST00000462063 KLHL34Q8N239 644 aa10.15□□□□□ -0.78
CCDC30-204ENST00000462063 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.14□□□□□ -0.79
CCDC30-204ENST00000462063 SNPHO15079 494 aa10.1□□□□□ -0.79
CCDC30-204ENST00000462063 GOLGA2Q08379 1002 aa10.1□□□□□ -0.79
CCDC30-204ENST00000462063 GSE1Q14687 1217 aa10.08□□□□□ -0.8
CCDC30-204ENST00000462063 MARVELD3Q96A59 401 aa10.08□□□□□ -0.8
CCDC30-204ENST00000462063 MKRN3Q13064 507 aaKnown RBP10.07□□□□□ -0.8
CCDC30-204ENST00000462063 ZNF467Q7Z7K2 595 aaPredicted RBP10.07□□□□□ -0.8
CCDC30-204ENST00000462063 VASPP50552 380 aaPredicted RBP10.06□□□□□ -0.8
CCDC30-204ENST00000462063 TMEM121BQ9BXQ6 578 aaPredicted RBP10.06□□□□□ -0.8
CCDC30-204ENST00000462063 C3orf67Q6ZVT6 689 aa10.05□□□□□ -0.8
CCDC30-204ENST00000462063 PDCD7Q8N8D1 485 aaKnown RBP10.04□□□□□ -0.8
CCDC30-204ENST00000462063 L3MBTL3Q96JM7 780 aaPredicted RBP10.02□□□□□ -0.81
CCDC30-204ENST00000462063 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.02□□□□□ -0.81
CCDC30-204ENST00000462063 PSEN1P49768 467 aa10.01□□□□□ -0.81
CCDC30-204ENST00000462063 CHRM1P11229 460 aaPredicted RBP9.98□□□□□ -0.81
CCDC30-204ENST00000462063 EMP3P54852 163 aa9.96□□□□□ -0.82
CCDC30-204ENST00000462063 CIZ1Q9ULV3 898 aaPredicted RBP9.94□□□□□ -0.82
CCDC30-204ENST00000462063 PDAP1Q13442 181 aaKnown RBP9.93□□□□□ -0.82
CCDC30-204ENST00000462063 DPY19L2Q6NUT2 758 aa9.92□□□□□ -0.82
CCDC30-204ENST00000462063 FAM205CA6NFA0 338 aa9.91□□□□□ -0.82
CCDC30-204ENST00000462063 G3V3G9 751 aa9.91□□□□□ -0.82
CCDC30-204ENST00000462063 CABP2Q9NPB3 220 aa9.91□□□□□ -0.82
CCDC30-204ENST00000462063 HS3ST6Q96QI5 342 aa9.89□□□□□ -0.83
CCDC30-204ENST00000462063 SPOCK2Q92563 424 aa9.88□□□□□ -0.83
CCDC30-204ENST00000462063 POTEB3A0JP26 581 aa9.86□□□□□ -0.83
CCDC30-204ENST00000462063 POTEBQ6S5H4 581 aa9.86□□□□□ -0.83
CCDC30-204ENST00000462063 ILDR1Q86SU0 546 aaPredicted RBP9.85□□□□□ -0.83
CCDC30-204ENST00000462063 IFNLR1Q8IU57 520 aaPredicted RBP9.85□□□□□ -0.83
CCDC30-204ENST00000462063 BOLA1Q9Y3E2 137 aa9.85□□□□□ -0.83
CCDC30-204ENST00000462063 KRTAP3-3Q9BYR6 98 aa9.83□□□□□ -0.84
CCDC30-204ENST00000462063 KRTAP3-2Q9BYR7 98 aa9.83□□□□□ -0.84
CCDC30-204ENST00000462063 ZNF710Q8N1W2 664 aa9.8□□□□□ -0.84
CCDC30-204ENST00000462063 HOXB3P14651 431 aaPredicted RBP9.78□□□□□ -0.84
CCDC30-204ENST00000462063 EFCAB3Q8N7B9 438 aa9.76□□□□□ -0.85
CCDC30-204ENST00000462063 HOXB1P14653 301 aaPredicted RBP9.74□□□□□ -0.85
CCDC30-204ENST00000462063 DOK7Q18PE1 504 aa9.74□□□□□ -0.85
CCDC30-204ENST00000462063 ERBB3P21860 1342 aa9.74□□□□□ -0.85
CCDC30-204ENST00000462063 RIMBP2O15034 1052 aa9.69□□□□□ -0.86
CCDC30-204ENST00000462063 TRIM41Q8WV44 630 aa9.69□□□□□ -0.86
CCDC30-204ENST00000462063 VARS2Q5ST30 1063 aaKnown RBP9.67□□□□□ -0.86
CCDC30-204ENST00000462063 MICALL2Q8IY33 904 aa9.66□□□□□ -0.86
CCDC30-204ENST00000462063 TMEM92Q6UXU6 159 aa9.64□□□□□ -0.87
CCDC30-204ENST00000462063 RIOK3O14730 519 aaKnown RBP9.61□□□□□ -0.87
CCDC30-204ENST00000462063 SOX12O15370 315 aa9.61□□□□□ -0.87
CCDC30-204ENST00000462063 RNF166Q96A37 237 aaPredicted RBP9.61□□□□□ -0.87
CCDC30-204ENST00000462063 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.6□□□□□ -0.87
CCDC30-204ENST00000462063 ZFP91Q96JP5 570 aaPredicted RBP9.6□□□□□ -0.87
CCDC30-204ENST00000462063 PHF8Q9UPP1 1060 aa9.6□□□□□ -0.87
CCDC30-204ENST00000462063 MS4A4AQ96JQ5 239 aa9.59□□□□□ -0.87
CCDC30-204ENST00000462063 ZSWIM6Q9HCJ5 1215 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms