RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 METRNQ9UJH8 293 aa8.49□□□□□ -1.05
HDAC6-212ENST00000461608 PLEKHG5O94827 1062 aa8.45□□□□□ -1.06
HDAC6-212ENST00000461608 POTEB2H3BUK9 544 aa8.44□□□□□ -1.06
HDAC6-212ENST00000461608 PROM2Q8N271 834 aa8.43□□□□□ -1.06
HDAC6-212ENST00000461608 ASTLQ6HA08 431 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-212ENST00000461608 FAM163AQ96GL9 167 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-212ENST00000461608 MNX1P50219 401 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-212ENST00000461608 MS4A3Q96HJ5 214 aa8.4□□□□□ -1.06
HDAC6-212ENST00000461608 ATMINO43313 823 aaPredicted RBP8.39□□□□□ -1.07
HDAC6-212ENST00000461608 PELP1Q8IZL8 1130 aaKnown RBP8.38□□□□□ -1.07
HDAC6-212ENST00000461608 TSPYL2Q9H2G4 693 aaPredicted RBP8.38□□□□□ -1.07
HDAC6-212ENST00000461608 SEC24BO95487 1268 aa8.35□□□□□ -1.07
HDAC6-212ENST00000461608 ATN1P54259 1190 aaPredicted RBP8.29□□□□□ -1.08
HDAC6-212ENST00000461608 TIE1P35590 1138 aa8.26□□□□□ -1.09
HDAC6-212ENST00000461608 CCDC61Q9Y6R9 512 aa8.25□□□□□ -1.09
HDAC6-212ENST00000461608 KIF12Q96FN5 646 aa8.24□□□□□ -1.09
HDAC6-212ENST00000461608 POTEJP0CG39 1038 aa8.23□□□□□ -1.09
HDAC6-212ENST00000461608 MIER1Q8N108 512 aa8.23□□□□□ -1.09
HDAC6-212ENST00000461608 CDAN1Q8IWY9 1227 aa8.22□□□□□ -1.09
HDAC6-212ENST00000461608 BMP2KQ9NSY1 1161 aaPredicted RBP8.22□□□□□ -1.09
HDAC6-212ENST00000461608 FKBP8Q14318 412 aa8.21□□□□□ -1.1
HDAC6-212ENST00000461608 ZBTB47Q9UFB7 747 aaPredicted RBP8.2□□□□□ -1.1
HDAC6-212ENST00000461608 MAP3K13O43283 966 aa8.19□□□□□ -1.1
HDAC6-212ENST00000461608 IER5LQ5T953 404 aa8.19□□□□□ -1.1
HDAC6-212ENST00000461608 RASEFQ8IZ41 740 aa8.17□□□□□ -1.1
HDAC6-212ENST00000461608 SLAIN1Q8ND83 568 aa8.17□□□□□ -1.1
HDAC6-212ENST00000461608 PLCD3Q8N3E9 789 aa8.16□□□□□ -1.1
HDAC6-212ENST00000461608 TTLL13PA6NNM8 815 aa8.15□□□□□ -1.1
HDAC6-212ENST00000461608 PLCG2P16885 1265 aa8.15□□□□□ -1.1
HDAC6-212ENST00000461608 LCE2DQ5TA82 110 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-212ENST00000461608 SGIP1Q9BQI5 828 aa8.15□□□□□ -1.1
HDAC6-212ENST00000461608 TRIM35Q9UPQ4 493 aa8.15□□□□□ -1.1
HDAC6-212ENST00000461608 PCDHB13Q9Y5F0 798 aa8.15□□□□□ -1.1
HDAC6-212ENST00000461608 SNPHO15079 494 aa8.13□□□□□ -1.11
HDAC6-212ENST00000461608 TRPC6Q9Y210 931 aa8.13□□□□□ -1.11
HDAC6-212ENST00000461608 POTEFA5A3E0 1075 aa8.1□□□□□ -1.11
HDAC6-212ENST00000461608 COLQQ9Y215 455 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-212ENST00000461608 NUBP1P53384 320 aa8.08□□□□□ -1.12
HDAC6-212ENST00000461608 FAM212AQ96EL1 285 aa8.08□□□□□ -1.12
HDAC6-212ENST00000461608 TMEM121BQ9BXQ6 578 aaPredicted RBP8.08□□□□□ -1.12
HDAC6-212ENST00000461608 ST18O60284 1047 aa8.07□□□□□ -1.12
HDAC6-212ENST00000461608 TMEM106CQ9BVX2 250 aa8.06□□□□□ -1.12
HDAC6-212ENST00000461608 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.05□□□□□ -1.12
HDAC6-212ENST00000461608 MMRN1Q13201 1228 aa8.01□□□□□ -1.13
HDAC6-212ENST00000461608 GOLGA2Q08379 1002 aa8□□□□□ -1.13
HDAC6-212ENST00000461608 OCEL1Q9H607 264 aa8□□□□□ -1.13
HDAC6-212ENST00000461608 IFNL1Q8IU54 200 aa7.99□□□□□ -1.13
HDAC6-212ENST00000461608 C3orf67Q6ZVT6 689 aa7.98□□□□□ -1.13
HDAC6-212ENST00000461608 SPNS2Q8IVW8 549 aa7.98□□□□□ -1.13
HDAC6-212ENST00000461608 AMER1Q5JTC6 1135 aaPredicted RBP7.97□□□□□ -1.13
HDAC6-212ENST00000461608 DCAF8Q5TAQ9 597 aa7.95□□□□□ -1.14
HDAC6-212ENST00000461608 EMP3P54852 163 aa7.94□□□□□ -1.14
HDAC6-212ENST00000461608 IRX5P78411 483 aaPredicted RBP7.93□□□□□ -1.14
HDAC6-212ENST00000461608 VASPP50552 380 aaPredicted RBP7.92□□□□□ -1.14
HDAC6-212ENST00000461608 MARVELD3Q96A59 401 aa7.92□□□□□ -1.14
HDAC6-212ENST00000461608 L3MBTL3Q96JM7 780 aaPredicted RBP7.92□□□□□ -1.14
HDAC6-212ENST00000461608 G3V3G9 751 aa7.91□□□□□ -1.14
HDAC6-212ENST00000461608 MKRN3Q13064 507 aaKnown RBP7.91□□□□□ -1.14
HDAC6-212ENST00000461608 PYGBP11216 843 aa7.9□□□□□ -1.14
HDAC6-212ENST00000461608 FBXO3Q9UK99 471 aa7.9□□□□□ -1.14
HDAC6-212ENST00000461608 PCDHB8Q9UN66 801 aa7.86□□□□□ -1.15
HDAC6-212ENST00000461608 FAM205CA6NFA0 338 aa7.84□□□□□ -1.15
HDAC6-212ENST00000461608 ZNF467Q7Z7K2 595 aaPredicted RBP7.84□□□□□ -1.15
HDAC6-212ENST00000461608 IFNLR1Q8IU57 520 aaPredicted RBP7.84□□□□□ -1.15
HDAC6-212ENST00000461608 KLHL34Q8N239 644 aa7.83□□□□□ -1.16
HDAC6-212ENST00000461608 HS3ST6Q96QI5 342 aa7.82□□□□□ -1.16
HDAC6-212ENST00000461608 GSE1Q14687 1217 aa7.81□□□□□ -1.16
HDAC6-212ENST00000461608 ZNF710Q8N1W2 664 aa7.81□□□□□ -1.16
HDAC6-212ENST00000461608 RTN4Q9NQC3 1192 aaKnown RBP7.8□□□□□ -1.16
HDAC6-212ENST00000461608 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.8□□□□□ -1.16
HDAC6-212ENST00000461608 RIMBP2O15034 1052 aa7.77□□□□□ -1.17
HDAC6-212ENST00000461608 ERBB3P21860 1342 aa7.74□□□□□ -1.17
HDAC6-212ENST00000461608 DOK7Q18PE1 504 aa7.73□□□□□ -1.17
HDAC6-212ENST00000461608 CHRM1P11229 460 aaPredicted RBP7.72□□□□□ -1.17
HDAC6-212ENST00000461608 PDCD7Q8N8D1 485 aaKnown RBP7.72□□□□□ -1.17
HDAC6-212ENST00000461608 SPOCK2Q92563 424 aa7.72□□□□□ -1.17
HDAC6-212ENST00000461608 RNF166Q96A37 237 aaPredicted RBP7.72□□□□□ -1.17
HDAC6-212ENST00000461608 PSEN1P49768 467 aa7.71□□□□□ -1.18
HDAC6-212ENST00000461608 KRTAP3-3Q9BYR6 98 aa7.7□□□□□ -1.18
HDAC6-212ENST00000461608 KRTAP3-2Q9BYR7 98 aa7.7□□□□□ -1.18
HDAC6-212ENST00000461608 CIZ1Q9ULV3 898 aaPredicted RBP7.7□□□□□ -1.18
HDAC6-212ENST00000461608 BOLA1Q9Y3E2 137 aa7.68□□□□□ -1.18
HDAC6-212ENST00000461608 PTGER2P43116 358 aa7.66□□□□□ -1.18
HDAC6-212ENST00000461608 PDAP1Q13442 181 aaKnown RBP7.66□□□□□ -1.18
HDAC6-212ENST00000461608 MYT1LQ9UL68 1186 aa7.66□□□□□ -1.18
HDAC6-212ENST00000461608 HOXB1P14653 301 aaPredicted RBP7.65□□□□□ -1.18
HDAC6-212ENST00000461608 DPY19L2Q6NUT2 758 aa7.63□□□□□ -1.19
HDAC6-212ENST00000461608 ILDR1Q86SU0 546 aaPredicted RBP7.63□□□□□ -1.19
HDAC6-212ENST00000461608 CABP2Q9NPB3 220 aa7.63□□□□□ -1.19
HDAC6-212ENST00000461608 POTEB3A0JP26 581 aa7.62□□□□□ -1.19
HDAC6-212ENST00000461608 POTEBQ6S5H4 581 aa7.62□□□□□ -1.19
HDAC6-212ENST00000461608 SLC24A1O60721 1099 aa7.61□□□□□ -1.19
HDAC6-212ENST00000461608 RNF25Q96BH1 459 aaPredicted RBP7.61□□□□□ -1.19
HDAC6-212ENST00000461608 VARS2Q5ST30 1063 aaKnown RBP7.6□□□□□ -1.19
HDAC6-212ENST00000461608 ZSWIM6Q9HCJ5 1215 aa7.58□□□□□ -1.2
HDAC6-212ENST00000461608 HOXB3P14651 431 aaPredicted RBP7.56□□□□□ -1.2
HDAC6-212ENST00000461608 ZNF687Q8N1G0 1237 aa7.55□□□□□ -1.2
HDAC6-212ENST00000461608 EFCAB3Q8N7B9 438 aa7.54□□□□□ -1.2
HDAC6-212ENST00000461608 ANKRD13DQ6ZTN6 518 aa7.53□□□□□ -1.2
HDAC6-212ENST00000461608 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms