RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 PLEKHG5O94827 1062 aa15.93■□□□□ 0.14
CFHR3-204ENST00000461558 ATMINO43313 823 aaPredicted RBP15.92■□□□□ 0.14
CFHR3-204ENST00000461558 CCDC61Q9Y6R9 512 aa15.92■□□□□ 0.14
CFHR3-204ENST00000461558 METRNQ9UJH8 293 aa15.91■□□□□ 0.14
CFHR3-204ENST00000461558 SLC39A7Q92504 469 aa15.9■□□□□ 0.14
CFHR3-204ENST00000461558 C7P10643 843 aa15.87■□□□□ 0.13
CFHR3-204ENST00000461558 MIER1Q8N108 512 aa15.87■□□□□ 0.13
CFHR3-204ENST00000461558 KIF12Q96FN5 646 aa15.83■□□□□ 0.12
CFHR3-204ENST00000461558 POTEMA6NI47 508 aa15.81■□□□□ 0.12
CFHR3-204ENST00000461558 FKBP8Q14318 412 aa15.8■□□□□ 0.12
CFHR3-204ENST00000461558 ATN1P54259 1190 aaPredicted RBP15.78■□□□□ 0.12
CFHR3-204ENST00000461558 POTEGQ6S5H5 508 aa15.76■□□□□ 0.11
CFHR3-204ENST00000461558 RASEFQ8IZ41 740 aa15.76■□□□□ 0.11
CFHR3-204ENST00000461558 MAP3K13O43283 966 aa15.73■□□□□ 0.11
CFHR3-204ENST00000461558 POTEJP0CG39 1038 aa15.73■□□□□ 0.11
CFHR3-204ENST00000461558 MAMSTRQ6ZN01 415 aa15.73■□□□□ 0.11
CFHR3-204ENST00000461558 PLCD3Q8N3E9 789 aa15.73■□□□□ 0.11
CFHR3-204ENST00000461558 BMP2KQ9NSY1 1161 aaPredicted RBP15.71■□□□□ 0.11
CFHR3-204ENST00000461558 TIE1P35590 1138 aa15.69■□□□□ 0.1
CFHR3-204ENST00000461558 TRPC6Q9Y210 931 aa15.69■□□□□ 0.1
CFHR3-204ENST00000461558 ZBTB47Q9UFB7 747 aaPredicted RBP15.66■□□□□ 0.1
CFHR3-204ENST00000461558 SCUBE2Q9NQ36 999 aa15.65■□□□□ 0.1
CFHR3-204ENST00000461558 POTEFA5A3E0 1075 aa15.58■□□□□ 0.08
CFHR3-204ENST00000461558 TTLL13PA6NNM8 815 aa15.58■□□□□ 0.08
CFHR3-204ENST00000461558 SGIP1Q9BQI5 828 aa15.57■□□□□ 0.08
CFHR3-204ENST00000461558 PCDHB13Q9Y5F0 798 aa15.56■□□□□ 0.08
CFHR3-204ENST00000461558 NUBP1P53384 320 aa15.55■□□□□ 0.08
CFHR3-204ENST00000461558 LCE2DQ5TA82 110 aaPredicted RBP15.55■□□□□ 0.08
CFHR3-204ENST00000461558 SEC24BO95487 1268 aa15.54■□□□□ 0.08
CFHR3-204ENST00000461558 PCDH10Q9P2E7 1040 aa15.54■□□□□ 0.08
CFHR3-204ENST00000461558 FAM212AQ96EL1 285 aa15.51■□□□□ 0.07
CFHR3-204ENST00000461558 TRIM35Q9UPQ4 493 aa15.49■□□□□ 0.07
CFHR3-204ENST00000461558 COLQQ9Y215 455 aaPredicted RBP15.48■□□□□ 0.07
CFHR3-204ENST00000461558 FAM163AQ96GL9 167 aaPredicted RBP15.47■□□□□ 0.07
CFHR3-204ENST00000461558 IER5LQ5T953 404 aa15.46■□□□□ 0.07
CFHR3-204ENST00000461558 FBXO3Q9UK99 471 aa15.46■□□□□ 0.07
CFHR3-204ENST00000461558 IFNL1Q8IU54 200 aa15.44■□□□□ 0.06
CFHR3-204ENST00000461558 TMEM106CQ9BVX2 250 aa15.38■□□□□ 0.05
CFHR3-204ENST00000461558 DCAF8Q5TAQ9 597 aa15.31■□□□□ 0.04
CFHR3-204ENST00000461558 PLCG2P16885 1265 aa15.3■□□□□ 0.04
CFHR3-204ENST00000461558 VASPP50552 380 aaPredicted RBP15.29■□□□□ 0.04
CFHR3-204ENST00000461558 PYGBP11216 843 aa15.27■□□□□ 0.04
CFHR3-204ENST00000461558 SLAIN1Q8ND83 568 aa15.25■□□□□ 0.03
CFHR3-204ENST00000461558 IRX5P78411 483 aaPredicted RBP15.23■□□□□ 0.03
CFHR3-204ENST00000461558 KLHL34Q8N239 644 aa15.2■□□□□ 0.02
CFHR3-204ENST00000461558 PCDHB8Q9UN66 801 aa15.17■□□□□ 0.02
CFHR3-204ENST00000461558 OCEL1Q9H607 264 aa15.16■□□□□ 0.02
CFHR3-204ENST00000461558 CDAN1Q8IWY9 1227 aa15.13■□□□□ 0.01
CFHR3-204ENST00000461558 ST18O60284 1047 aa15.12■□□□□ 0.01
CFHR3-204ENST00000461558 GSE1Q14687 1217 aa15.11■□□□□ 0.01
CFHR3-204ENST00000461558 ZNF467Q7Z7K2 595 aaPredicted RBP15.08■□□□□ 0
CFHR3-204ENST00000461558 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.05■□□□□ -0
CFHR3-204ENST00000461558 GOLGA2Q08379 1002 aa15.03■□□□□ -0
CFHR3-204ENST00000461558 IFNLR1Q8IU57 520 aaPredicted RBP15.01□□□□□ -0.01
CFHR3-204ENST00000461558 SNPHO15079 494 aa15□□□□□ -0.01
CFHR3-204ENST00000461558 MKRN3Q13064 507 aaKnown RBP14.99□□□□□ -0.01
CFHR3-204ENST00000461558 CHRM1P11229 460 aaPredicted RBP14.97□□□□□ -0.01
CFHR3-204ENST00000461558 SPOCK2Q92563 424 aa14.97□□□□□ -0.01
CFHR3-204ENST00000461558 TMEM121BQ9BXQ6 578 aaPredicted RBP14.97□□□□□ -0.01
CFHR3-204ENST00000461558 PDCD7Q8N8D1 485 aaKnown RBP14.96□□□□□ -0.01
CFHR3-204ENST00000461558 C3orf67Q6ZVT6 689 aa14.93□□□□□ -0.02
CFHR3-204ENST00000461558 PSEN1P49768 467 aa14.92□□□□□ -0.02
CFHR3-204ENST00000461558 L3MBTL3Q96JM7 780 aaPredicted RBP14.92□□□□□ -0.02
CFHR3-204ENST00000461558 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.89□□□□□ -0.03
CFHR3-204ENST00000461558 CIZ1Q9ULV3 898 aaPredicted RBP14.87□□□□□ -0.03
CFHR3-204ENST00000461558 PDAP1Q13442 181 aaKnown RBP14.84□□□□□ -0.03
CFHR3-204ENST00000461558 MARVELD3Q96A59 401 aa14.84□□□□□ -0.03
CFHR3-204ENST00000461558 MMRN1Q13201 1228 aa14.79□□□□□ -0.04
CFHR3-204ENST00000461558 SPNS2Q8IVW8 549 aa14.79□□□□□ -0.04
CFHR3-204ENST00000461558 ILDR1Q86SU0 546 aaPredicted RBP14.76□□□□□ -0.05
CFHR3-204ENST00000461558 CABP2Q9NPB3 220 aa14.76□□□□□ -0.05
CFHR3-204ENST00000461558 EMP3P54852 163 aa14.75□□□□□ -0.05
CFHR3-204ENST00000461558 G3V3G9 751 aa14.72□□□□□ -0.05
CFHR3-204ENST00000461558 DPY19L2Q6NUT2 758 aa14.71□□□□□ -0.05
CFHR3-204ENST00000461558 TRIM41Q8WV44 630 aa14.69□□□□□ -0.06
CFHR3-204ENST00000461558 BOLA1Q9Y3E2 137 aa14.68□□□□□ -0.06
CFHR3-204ENST00000461558 HS3ST6Q96QI5 342 aa14.64□□□□□ -0.07
CFHR3-204ENST00000461558 FAM205CA6NFA0 338 aa14.63□□□□□ -0.07
CFHR3-204ENST00000461558 POTEB3A0JP26 581 aa14.57□□□□□ -0.08
CFHR3-204ENST00000461558 POTEBQ6S5H4 581 aa14.57□□□□□ -0.08
CFHR3-204ENST00000461558 HOXB3P14651 431 aaPredicted RBP14.55□□□□□ -0.08
CFHR3-204ENST00000461558 KRTAP3-3Q9BYR6 98 aa14.55□□□□□ -0.08
CFHR3-204ENST00000461558 KRTAP3-2Q9BYR7 98 aa14.55□□□□□ -0.08
CFHR3-204ENST00000461558 EFCAB3Q8N7B9 438 aa14.54□□□□□ -0.08
CFHR3-204ENST00000461558 ZNF710Q8N1W2 664 aa14.53□□□□□ -0.08
CFHR3-204ENST00000461558 DOK7Q18PE1 504 aa14.51□□□□□ -0.09
CFHR3-204ENST00000461558 RNF25Q96BH1 459 aaPredicted RBP14.5□□□□□ -0.09
CFHR3-204ENST00000461558 RIOK3O14730 519 aaKnown RBP14.49□□□□□ -0.09
CFHR3-204ENST00000461558 HOXB1P14653 301 aaPredicted RBP14.48□□□□□ -0.09
CFHR3-204ENST00000461558 RIMBP2O15034 1052 aa14.43□□□□□ -0.1
CFHR3-204ENST00000461558 ERBB3P21860 1342 aa14.42□□□□□ -0.1
CFHR3-204ENST00000461558 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.42□□□□□ -0.1
CFHR3-204ENST00000461558 VGFO15240 615 aaPredicted RBP14.42□□□□□ -0.1
CFHR3-204ENST00000461558 ZFP91Q96JP5 570 aaPredicted RBP14.42□□□□□ -0.1
CFHR3-204ENST00000461558 MICALL2Q8IY33 904 aa14.41□□□□□ -0.1
CFHR3-204ENST00000461558 SOX12O15370 315 aa14.4□□□□□ -0.1
CFHR3-204ENST00000461558 TMEM92Q6UXU6 159 aa14.34□□□□□ -0.11
CFHR3-204ENST00000461558 ZSWIM6Q9HCJ5 1215 aa14.33□□□□□ -0.12
CFHR3-204ENST00000461558 VARS2Q5ST30 1063 aaKnown RBP14.32□□□□□ -0.12
CFHR3-204ENST00000461558 MS4A4AQ96JQ5 239 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms