RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 MS4A3Q96HJ5 214 aa14.66□□□□□ -0.06
CCT4-203ENST00000461540 ATMINO43313 823 aaPredicted RBP14.65□□□□□ -0.06
CCT4-203ENST00000461540 SPDYE4A6NLX3 237 aa14.64□□□□□ -0.07
CCT4-203ENST00000461540 MNX1P50219 401 aaPredicted RBP14.63□□□□□ -0.07
CCT4-203ENST00000461540 POTEJP0CG39 1038 aa14.62□□□□□ -0.07
CCT4-203ENST00000461540 FAM163AQ96GL9 167 aaPredicted RBP14.6□□□□□ -0.07
CCT4-203ENST00000461540 SCUBE2Q9NQ36 999 aa14.6□□□□□ -0.07
CCT4-203ENST00000461540 LCE2DQ5TA82 110 aaPredicted RBP14.53□□□□□ -0.08
CCT4-203ENST00000461540 ATN1P54259 1190 aaPredicted RBP14.48□□□□□ -0.09
CCT4-203ENST00000461540 TSPYL2Q9H2G4 693 aaPredicted RBP14.48□□□□□ -0.09
CCT4-203ENST00000461540 CSRNP3Q8WYN3 585 aa14.45□□□□□ -0.1
CCT4-203ENST00000461540 CCDC61Q9Y6R9 512 aa14.39□□□□□ -0.11
CCT4-203ENST00000461540 KIF12Q96FN5 646 aa14.36□□□□□ -0.11
CCT4-203ENST00000461540 BMP2KQ9NSY1 1161 aaPredicted RBP14.36□□□□□ -0.11
CCT4-203ENST00000461540 POTEFA5A3E0 1075 aa14.34□□□□□ -0.11
CCT4-203ENST00000461540 TIE1P35590 1138 aa14.3□□□□□ -0.12
CCT4-203ENST00000461540 CDAN1Q8IWY9 1227 aa14.3□□□□□ -0.12
CCT4-203ENST00000461540 SEC24BO95487 1268 aa14.29□□□□□ -0.12
CCT4-203ENST00000461540 TRPC6Q9Y210 931 aa14.28□□□□□ -0.12
CCT4-203ENST00000461540 MAP3K13O43283 966 aa14.24□□□□□ -0.13
CCT4-203ENST00000461540 COLQQ9Y215 455 aaPredicted RBP14.22□□□□□ -0.13
CCT4-203ENST00000461540 TTLL13PA6NNM8 815 aa14.19□□□□□ -0.14
CCT4-203ENST00000461540 PLEKHG5O94827 1062 aa14.19□□□□□ -0.14
CCT4-203ENST00000461540 IER5LQ5T953 404 aa14.14□□□□□ -0.15
CCT4-203ENST00000461540 SLAIN1Q8ND83 568 aa14.12□□□□□ -0.15
CCT4-203ENST00000461540 TRIM35Q9UPQ4 493 aa14.12□□□□□ -0.15
CCT4-203ENST00000461540 RASEFQ8IZ41 740 aa14.11□□□□□ -0.15
CCT4-203ENST00000461540 PROM2Q8N271 834 aa14.11□□□□□ -0.15
CCT4-203ENST00000461540 ST18O60284 1047 aa14.1□□□□□ -0.15
CCT4-203ENST00000461540 MIER1Q8N108 512 aa14.09□□□□□ -0.15
CCT4-203ENST00000461540 SGIP1Q9BQI5 828 aa14.05□□□□□ -0.16
CCT4-203ENST00000461540 PCDHB13Q9Y5F0 798 aa14.04□□□□□ -0.16
CCT4-203ENST00000461540 PLCG2P16885 1265 aa13.99□□□□□ -0.17
CCT4-203ENST00000461540 MMRN1Q13201 1228 aa13.99□□□□□ -0.17
CCT4-203ENST00000461540 EHMT2Q96KQ7 1210 aa13.96□□□□□ -0.17
CCT4-203ENST00000461540 SPNS2Q8IVW8 549 aa13.95□□□□□ -0.18
CCT4-203ENST00000461540 TMEM121BQ9BXQ6 578 aaPredicted RBP13.94□□□□□ -0.18
CCT4-203ENST00000461540 TMEM106CQ9BVX2 250 aa13.93□□□□□ -0.18
CCT4-203ENST00000461540 PLCD3Q8N3E9 789 aa13.91□□□□□ -0.18
CCT4-203ENST00000461540 IFNL1Q8IU54 200 aa13.9□□□□□ -0.18
CCT4-203ENST00000461540 SNPHO15079 494 aa13.88□□□□□ -0.19
CCT4-203ENST00000461540 ZBTB47Q9UFB7 747 aaPredicted RBP13.86□□□□□ -0.19
CCT4-203ENST00000461540 IRX5P78411 483 aaPredicted RBP13.85□□□□□ -0.19
CCT4-203ENST00000461540 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.82□□□□□ -0.2
CCT4-203ENST00000461540 NUBP1P53384 320 aa13.81□□□□□ -0.2
CCT4-203ENST00000461540 MARVELD3Q96A59 401 aa13.81□□□□□ -0.2
CCT4-203ENST00000461540 OCEL1Q9H607 264 aa13.81□□□□□ -0.2
CCT4-203ENST00000461540 FAM212AQ96EL1 285 aa13.8□□□□□ -0.2
CCT4-203ENST00000461540 EMP3P54852 163 aa13.68□□□□□ -0.22
CCT4-203ENST00000461540 C3orf67Q6ZVT6 689 aa13.63□□□□□ -0.23
CCT4-203ENST00000461540 PYGBP11216 843 aa13.6□□□□□ -0.23
CCT4-203ENST00000461540 DCAF8Q5TAQ9 597 aa13.59□□□□□ -0.23
CCT4-203ENST00000461540 HS3ST6Q96QI5 342 aa13.58□□□□□ -0.24
CCT4-203ENST00000461540 FAM205CA6NFA0 338 aa13.57□□□□□ -0.24
CCT4-203ENST00000461540 KRTAP3-3Q9BYR6 98 aa13.57□□□□□ -0.24
CCT4-203ENST00000461540 KRTAP3-2Q9BYR7 98 aa13.57□□□□□ -0.24
CCT4-203ENST00000461540 PCDHB8Q9UN66 801 aa13.57□□□□□ -0.24
CCT4-203ENST00000461540 L3MBTL3Q96JM7 780 aaPredicted RBP13.56□□□□□ -0.24
CCT4-203ENST00000461540 PDCD7Q8N8D1 485 aaKnown RBP13.53□□□□□ -0.24
CCT4-203ENST00000461540 GOLGA2Q08379 1002 aa13.52□□□□□ -0.25
CCT4-203ENST00000461540 POTEB3A0JP26 581 aa13.51□□□□□ -0.25
CCT4-203ENST00000461540 MKRN3Q13064 507 aaKnown RBP13.51□□□□□ -0.25
CCT4-203ENST00000461540 POTEBQ6S5H4 581 aa13.51□□□□□ -0.25
CCT4-203ENST00000461540 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.44□□□□□ -0.263e-9■■□□□ 12.2
CCT4-203ENST00000461540 ZNF467Q7Z7K2 595 aaPredicted RBP13.42□□□□□ -0.26
CCT4-203ENST00000461540 ZNF710Q8N1W2 664 aa13.32□□□□□ -0.28
CCT4-203ENST00000461540 RNF166Q96A37 237 aaPredicted RBP13.32□□□□□ -0.28
CCT4-203ENST00000461540 G3V3G9 751 aa13.31□□□□□ -0.28
CCT4-203ENST00000461540 GSE1Q14687 1217 aa13.31□□□□□ -0.28
CCT4-203ENST00000461540 PSEN1P49768 467 aa13.3□□□□□ -0.28
CCT4-203ENST00000461540 HOXB3P14651 431 aaPredicted RBP13.28□□□□□ -0.28
CCT4-203ENST00000461540 HOXB1P14653 301 aaPredicted RBP13.28□□□□□ -0.28
CCT4-203ENST00000461540 ERBB3P21860 1342 aa13.28□□□□□ -0.28
CCT4-203ENST00000461540 DPY19L2Q6NUT2 758 aa13.25□□□□□ -0.29
CCT4-203ENST00000461540 ILDR1Q86SU0 546 aaPredicted RBP13.25□□□□□ -0.29
CCT4-203ENST00000461540 BOLA1Q9Y3E2 137 aa13.25□□□□□ -0.29
CCT4-203ENST00000461540 DOK7Q18PE1 504 aa13.23□□□□□ -0.29
CCT4-203ENST00000461540 CHRM1P11229 460 aaPredicted RBP13.22□□□□□ -0.29
CCT4-203ENST00000461540 FKBP8Q14318 412 aa13.21□□□□□ -0.29
CCT4-203ENST00000461540 KLHL34Q8N239 644 aa13.21□□□□□ -0.29
CCT4-203ENST00000461540 MYT1LQ9UL68 1186 aa13.21□□□□□ -0.29
CCT4-203ENST00000461540 FBXO3Q9UK99 471 aa13.2□□□□□ -0.3
CCT4-203ENST00000461540 RIMBP2O15034 1052 aa13.18□□□□□ -0.3
CCT4-203ENST00000461540 PDAP1Q13442 181 aaKnown RBP13.18□□□□□ -0.3
CCT4-203ENST00000461540 VARS2Q5ST30 1063 aaKnown RBP13.17□□□□□ -0.3
CCT4-203ENST00000461540 CABP2Q9NPB3 220 aa13.15□□□□□ -0.3
CCT4-203ENST00000461540 PTGER2P43116 358 aa13.08□□□□□ -0.32
CCT4-203ENST00000461540 ZNF687Q8N1G0 1237 aa13.07□□□□□ -0.32
CCT4-203ENST00000461540 ZSWIM6Q9HCJ5 1215 aa13.03□□□□□ -0.32
CCT4-203ENST00000461540 VASPP50552 380 aaPredicted RBP13.02□□□□□ -0.33
CCT4-203ENST00000461540 ANKRD13DQ6ZTN6 518 aa12.96□□□□□ -0.33
CCT4-203ENST00000461540 GPR153Q6NV75 609 aa12.94□□□□□ -0.34
CCT4-203ENST00000461540 CIZ1Q9ULV3 898 aaPredicted RBP12.93□□□□□ -0.34
CCT4-203ENST00000461540 MICALL2Q8IY33 904 aa12.9□□□□□ -0.34
CCT4-203ENST00000461540 EFCAB3Q8N7B9 438 aa12.9□□□□□ -0.34
CCT4-203ENST00000461540 TMEM92Q6UXU6 159 aa12.89□□□□□ -0.35
CCT4-203ENST00000461540 ARSIQ5FYB1 569 aa12.85□□□□□ -0.35
CCT4-203ENST00000461540 LSM11P83369 360 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCT4-203ENST00000461540 SPOCK2Q92563 424 aa12.84□□□□□ -0.35
CCT4-203ENST00000461540 ZNF316A6NFI3 1004 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms