RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 SLC39A7Q92504 469 aa11.96□□□□□ -0.49
CLK1-206ENST00000461326 PLSCR2Q9NRY7 297 aa11.95□□□□□ -0.5
CLK1-206ENST00000461326 METRNQ9UJH8 293 aa11.95□□□□□ -0.5
CLK1-206ENST00000461326 ATMINO43313 823 aaPredicted RBP11.94□□□□□ -0.5
CLK1-206ENST00000461326 C7P10643 843 aa11.94□□□□□ -0.5
CLK1-206ENST00000461326 CCDC61Q9Y6R9 512 aa11.91□□□□□ -0.5
CLK1-206ENST00000461326 MAMSTRQ6ZN01 415 aa11.87□□□□□ -0.51
CLK1-206ENST00000461326 MIER1Q8N108 512 aa11.86□□□□□ -0.51
CLK1-206ENST00000461326 KIF12Q96FN5 646 aa11.85□□□□□ -0.51
CLK1-206ENST00000461326 POTEMA6NI47 508 aa11.83□□□□□ -0.52
CLK1-206ENST00000461326 ATN1P54259 1190 aaPredicted RBP11.82□□□□□ -0.52
CLK1-206ENST00000461326 POTEGQ6S5H5 508 aa11.79□□□□□ -0.52
CLK1-206ENST00000461326 SCUBE2Q9NQ36 999 aa11.79□□□□□ -0.52
CLK1-206ENST00000461326 TIE1P35590 1138 aa11.77□□□□□ -0.53
CLK1-206ENST00000461326 RASEFQ8IZ41 740 aa11.77□□□□□ -0.53
CLK1-206ENST00000461326 BMP2KQ9NSY1 1161 aaPredicted RBP11.77□□□□□ -0.53
CLK1-206ENST00000461326 MAP3K13O43283 966 aa11.76□□□□□ -0.53
CLK1-206ENST00000461326 POTEJP0CG39 1038 aa11.76□□□□□ -0.53
CLK1-206ENST00000461326 PLCD3Q8N3E9 789 aa11.76□□□□□ -0.53
CLK1-206ENST00000461326 ZBTB47Q9UFB7 747 aaPredicted RBP11.74□□□□□ -0.53
CLK1-206ENST00000461326 PCDH10Q9P2E7 1040 aa11.71□□□□□ -0.53
CLK1-206ENST00000461326 TRPC6Q9Y210 931 aa11.71□□□□□ -0.53
CLK1-206ENST00000461326 SGIP1Q9BQI5 828 aa11.69□□□□□ -0.54
CLK1-206ENST00000461326 SEC24BO95487 1268 aa11.68□□□□□ -0.54
CLK1-206ENST00000461326 TTLL13PA6NNM8 815 aa11.67□□□□□ -0.54
CLK1-206ENST00000461326 PCDHB13Q9Y5F0 798 aa11.66□□□□□ -0.54
CLK1-206ENST00000461326 POTEFA5A3E0 1075 aa11.65□□□□□ -0.54
CLK1-206ENST00000461326 FAM163AQ96GL9 167 aaPredicted RBP11.64□□□□□ -0.55
CLK1-206ENST00000461326 IER5LQ5T953 404 aa11.62□□□□□ -0.55
CLK1-206ENST00000461326 FAM212AQ96EL1 285 aa11.61□□□□□ -0.55
CLK1-206ENST00000461326 TRIM35Q9UPQ4 493 aa11.61□□□□□ -0.55
CLK1-206ENST00000461326 NUBP1P53384 320 aa11.6□□□□□ -0.55
CLK1-206ENST00000461326 COLQQ9Y215 455 aaPredicted RBP11.59□□□□□ -0.55
CLK1-206ENST00000461326 LCE2DQ5TA82 110 aaPredicted RBP11.57□□□□□ -0.56
CLK1-206ENST00000461326 IFNL1Q8IU54 200 aa11.54□□□□□ -0.56
CLK1-206ENST00000461326 FKBP8Q14318 412 aa11.53□□□□□ -0.56
CLK1-206ENST00000461326 TMEM106CQ9BVX2 250 aa11.52□□□□□ -0.57
CLK1-206ENST00000461326 PLCG2P16885 1265 aa11.49□□□□□ -0.57
CLK1-206ENST00000461326 SLAIN1Q8ND83 568 aa11.46□□□□□ -0.57
CLK1-206ENST00000461326 DCAF8Q5TAQ9 597 aa11.45□□□□□ -0.58
CLK1-206ENST00000461326 FBXO3Q9UK99 471 aa11.44□□□□□ -0.58
CLK1-206ENST00000461326 PYGBP11216 843 aa11.4□□□□□ -0.58
CLK1-206ENST00000461326 IRX5P78411 483 aaPredicted RBP11.4□□□□□ -0.58
CLK1-206ENST00000461326 CDAN1Q8IWY9 1227 aa11.38□□□□□ -0.59
CLK1-206ENST00000461326 OCEL1Q9H607 264 aa11.38□□□□□ -0.59
CLK1-206ENST00000461326 ST18O60284 1047 aa11.35□□□□□ -0.59
CLK1-206ENST00000461326 PCDHB8Q9UN66 801 aa11.33□□□□□ -0.6
CLK1-206ENST00000461326 GSE1Q14687 1217 aa11.31□□□□□ -0.6
CLK1-206ENST00000461326 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.31□□□□□ -0.6
CLK1-206ENST00000461326 SNPHO15079 494 aa11.3□□□□□ -0.6
CLK1-206ENST00000461326 KLHL34Q8N239 644 aa11.3□□□□□ -0.6
CLK1-206ENST00000461326 ZNF467Q7Z7K2 595 aaPredicted RBP11.29□□□□□ -0.6
CLK1-206ENST00000461326 GOLGA2Q08379 1002 aa11.28□□□□□ -0.6
CLK1-206ENST00000461326 TMEM121BQ9BXQ6 578 aaPredicted RBP11.28□□□□□ -0.6
CLK1-206ENST00000461326 VASPP50552 380 aaPredicted RBP11.25□□□□□ -0.61
CLK1-206ENST00000461326 MKRN3Q13064 507 aaKnown RBP11.24□□□□□ -0.61
CLK1-206ENST00000461326 C3orf67Q6ZVT6 689 aa11.22□□□□□ -0.61
CLK1-206ENST00000461326 L3MBTL3Q96JM7 780 aaPredicted RBP11.21□□□□□ -0.61
CLK1-206ENST00000461326 CHRM1P11229 460 aaPredicted RBP11.19□□□□□ -0.62
CLK1-206ENST00000461326 PDCD7Q8N8D1 485 aaKnown RBP11.19□□□□□ -0.62
CLK1-206ENST00000461326 PSEN1P49768 467 aa11.16□□□□□ -0.62
CLK1-206ENST00000461326 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.15□□□□□ -0.624e-13■■□□□ 11.9
CLK1-206ENST00000461326 MARVELD3Q96A59 401 aa11.13□□□□□ -0.63
CLK1-206ENST00000461326 PDAP1Q13442 181 aaKnown RBP11.11□□□□□ -0.63
CLK1-206ENST00000461326 SPNS2Q8IVW8 549 aa11.09□□□□□ -0.63
CLK1-206ENST00000461326 EMP3P54852 163 aa11.08□□□□□ -0.64
CLK1-206ENST00000461326 MMRN1Q13201 1228 aa11.08□□□□□ -0.64
CLK1-206ENST00000461326 G3V3G9 751 aa11.07□□□□□ -0.64
CLK1-206ENST00000461326 SPOCK2Q92563 424 aa11.07□□□□□ -0.64
CLK1-206ENST00000461326 CIZ1Q9ULV3 898 aaPredicted RBP11.05□□□□□ -0.64
CLK1-206ENST00000461326 ILDR1Q86SU0 546 aaPredicted RBP11.03□□□□□ -0.64
CLK1-206ENST00000461326 CABP2Q9NPB3 220 aa11.03□□□□□ -0.64
CLK1-206ENST00000461326 BOLA1Q9Y3E2 137 aa11□□□□□ -0.65
CLK1-206ENST00000461326 HS3ST6Q96QI5 342 aa10.99□□□□□ -0.65
CLK1-206ENST00000461326 FAM205CA6NFA0 338 aa10.98□□□□□ -0.65
CLK1-206ENST00000461326 DPY19L2Q6NUT2 758 aa10.98□□□□□ -0.65
CLK1-206ENST00000461326 IFNLR1Q8IU57 520 aaPredicted RBP10.98□□□□□ -0.65
CLK1-206ENST00000461326 TRIM41Q8WV44 630 aa10.93□□□□□ -0.66
CLK1-206ENST00000461326 ZNF710Q8N1W2 664 aa10.92□□□□□ -0.66
CLK1-206ENST00000461326 KRTAP3-3Q9BYR6 98 aa10.91□□□□□ -0.66
CLK1-206ENST00000461326 KRTAP3-2Q9BYR7 98 aa10.91□□□□□ -0.66
CLK1-206ENST00000461326 POTEB3A0JP26 581 aa10.9□□□□□ -0.66
CLK1-206ENST00000461326 DOK7Q18PE1 504 aa10.9□□□□□ -0.66
CLK1-206ENST00000461326 POTEBQ6S5H4 581 aa10.9□□□□□ -0.66
CLK1-206ENST00000461326 HOXB3P14651 431 aaPredicted RBP10.89□□□□□ -0.67
CLK1-206ENST00000461326 HOXB1P14653 301 aaPredicted RBP10.87□□□□□ -0.67
CLK1-206ENST00000461326 RIMBP2O15034 1052 aa10.86□□□□□ -0.67
CLK1-206ENST00000461326 EFCAB3Q8N7B9 438 aa10.85□□□□□ -0.67
CLK1-206ENST00000461326 ERBB3P21860 1342 aa10.84□□□□□ -0.67
CLK1-206ENST00000461326 SOX12O15370 315 aa10.77□□□□□ -0.69
CLK1-206ENST00000461326 MICALL2Q8IY33 904 aa10.77□□□□□ -0.69
CLK1-206ENST00000461326 ZSWIM6Q9HCJ5 1215 aa10.76□□□□□ -0.69
CLK1-206ENST00000461326 RIOK3O14730 519 aaKnown RBP10.75□□□□□ -0.69
CLK1-206ENST00000461326 VARS2Q5ST30 1063 aaKnown RBP10.74□□□□□ -0.69
CLK1-206ENST00000461326 VGFO15240 615 aaPredicted RBP10.72□□□□□ -0.69
CLK1-206ENST00000461326 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.7□□□□□ -0.7
CLK1-206ENST00000461326 TMEM92Q6UXU6 159 aa10.7□□□□□ -0.7
CLK1-206ENST00000461326 RNF166Q96A37 237 aaPredicted RBP10.7□□□□□ -0.7
CLK1-206ENST00000461326 ZFP91Q96JP5 570 aaPredicted RBP10.7□□□□□ -0.7
CLK1-206ENST00000461326 ZNF687Q8N1G0 1237 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms