RNA–Protein interactions for RNA: ENST00000461074.1

MCF2L2-205, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 7,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-205ENST00000461074 PPP1R15AO75807 674 aaPredicted RBP11.18□□□□□ -0.62
MCF2L2-205ENST00000461074 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.16□□□□□ -0.62
MCF2L2-205ENST00000461074 HDGFP51858 240 aaKnown RBP11.15□□□□□ -0.63
MCF2L2-205ENST00000461074 PNNQ9H307 717 aaKnown RBP11.15□□□□□ -0.63
MCF2L2-205ENST00000461074 TNIKQ9UKE5 1360 aa11.14□□□□□ -0.63
MCF2L2-205ENST00000461074 CDK11BP21127 795 aaKnown RBP11.14□□□□□ -0.63
MCF2L2-205ENST00000461074 DDRGK1Q96HY6 314 aa11.14□□□□□ -0.63
MCF2L2-205ENST00000461074 ERCC6Q03468 1493 aa11.14□□□□□ -0.63
MCF2L2-205ENST00000461074 CCDC136Q96JN2 1154 aa11.14□□□□□ -0.63
MCF2L2-205ENST00000461074 BECN1Q14457 450 aa11.13□□□□□ -0.63
MCF2L2-205ENST00000461074 MS4A1P11836 297 aa11.12□□□□□ -0.63
MCF2L2-205ENST00000461074 KANK1Q14678 1352 aa11.12□□□□□ -0.63
MCF2L2-205ENST00000461074 MRS2Q9HD23 443 aa11.12□□□□□ -0.63
MCF2L2-205ENST00000461074 TIMELESSQ9UNS1 1208 aa11.11□□□□□ -0.63
MCF2L2-205ENST00000461074 GLIPR1L2Q4G1C9 344 aa11.11□□□□□ -0.63
MCF2L2-205ENST00000461074 CEP162Q5TB80 1403 aa11.1□□□□□ -0.63
MCF2L2-205ENST00000461074 CASC1Q6TDU7 716 aa11.1□□□□□ -0.63
MCF2L2-205ENST00000461074 CFDP1Q9UEE9 299 aaPredicted RBP11.1□□□□□ -0.63
MCF2L2-205ENST00000461074 CHIC2Q9UKJ5 165 aa11.1□□□□□ -0.63
MCF2L2-205ENST00000461074 FAM9BQ8IZU0 186 aa11.09□□□□□ -0.63
MCF2L2-205ENST00000461074 SMARCA2P51531 1590 aa11.09□□□□□ -0.63
MCF2L2-205ENST00000461074 NCLP19338 710 aaKnown RBP11.09□□□□□ -0.63
MCF2L2-205ENST00000461074 DDX10Q13206 875 aaKnown RBP11.08□□□□□ -0.64
MCF2L2-205ENST00000461074 GOLGA6L22H0YM25 854 aa11.08□□□□□ -0.64
MCF2L2-205ENST00000461074 FKBP8Q14318 412 aa11.08□□□□□ -0.64
MCF2L2-205ENST00000461074 NUDCQ9Y266 331 aa11.08□□□□□ -0.64
MCF2L2-205ENST00000461074 CFAP44Q96MT7 982 aa11.08□□□□□ -0.64
MCF2L2-205ENST00000461074 HAP1P54257 671 aaPredicted RBP11.08□□□□□ -0.64
MCF2L2-205ENST00000461074 KNSTRNQ9Y448 316 aa11.07□□□□□ -0.64
MCF2L2-205ENST00000461074 BCL11AQ9H165 835 aa11.06□□□□□ -0.64
MCF2L2-205ENST00000461074 C14orf37Q86TY3 774 aa11.04□□□□□ -0.64
MCF2L2-205ENST00000461074 KDM2AQ9Y2K7 1162 aa11.04□□□□□ -0.64
MCF2L2-205ENST00000461074 CHMP4AQ9BY43 222 aa11.04□□□□□ -0.64
MCF2L2-205ENST00000461074 CARMIL2Q6F5E8 1435 aa11.03□□□□□ -0.64
MCF2L2-205ENST00000461074 CCNB3Q8WWL7 1395 aa11.03□□□□□ -0.64
MCF2L2-205ENST00000461074 MYO15BQ96JP2 1530 aa11.03□□□□□ -0.64
MCF2L2-205ENST00000461074 PDS5BQ9NTI5 1447 aa11.02□□□□□ -0.65
MCF2L2-205ENST00000461074 MAPK8IP3Q9UPT6 1336 aa11.01□□□□□ -0.65
MCF2L2-205ENST00000461074 SCAF1Q9H7N4 1312 aaKnown RBP11□□□□□ -0.65
MCF2L2-205ENST00000461074 ARID4BQ4LE39 1312 aaPredicted RBP10.99□□□□□ -0.65
MCF2L2-205ENST00000461074 KCNH8Q96L42 1107 aa10.99□□□□□ -0.65
MCF2L2-205ENST00000461074 ZRSR1Q15695 479 aaKnown RBP10.99□□□□□ -0.65
MCF2L2-205ENST00000461074 RRP7BPQ9NSQ0 103 aa10.98□□□□□ -0.65
MCF2L2-205ENST00000461074 CARD11Q9BXL7 1154 aa10.97□□□□□ -0.65
MCF2L2-205ENST00000461074 POGKQ9P215 609 aa10.96□□□□□ -0.66
MCF2L2-205ENST00000461074 PLPPR3Q6T4P5 718 aa10.96□□□□□ -0.66
MCF2L2-205ENST00000461074 FTSJ3Q8IY81 847 aaKnown RBP10.95□□□□□ -0.66
MCF2L2-205ENST00000461074 FMN1Q68DA7 1419 aa10.95□□□□□ -0.66
MCF2L2-205ENST00000461074 CARMIL1Q5VZK9 1371 aa10.95□□□□□ -0.66
MCF2L2-205ENST00000461074 TMF1P82094 1093 aa10.94□□□□□ -0.66
MCF2L2-205ENST00000461074 ARHGAP35Q9NRY4 1499 aa10.93□□□□□ -0.66
MCF2L2-205ENST00000461074 RSPH4AQ5TD94 716 aa10.93□□□□□ -0.66
MCF2L2-205ENST00000461074 CALD1Q05682 793 aaKnown RBP10.92□□□□□ -0.66
MCF2L2-205ENST00000461074 GOLGA6L6A8MZA4 724 aa10.92□□□□□ -0.66
MCF2L2-205ENST00000461074 CUX2O14529 1486 aa10.92□□□□□ -0.66
MCF2L2-205ENST00000461074 PPM1GO15355 546 aaPredicted RBP10.92□□□□□ -0.66
MCF2L2-205ENST00000461074 NRDCO43847 1150 aa10.9□□□□□ -0.66
MCF2L2-205ENST00000461074 TRIM44Q96DX7 344 aaPredicted RBP10.9□□□□□ -0.66
MCF2L2-205ENST00000461074 EIF3AQ14152 1382 aaKnown RBP10.9□□□□□ -0.66
MCF2L2-205ENST00000461074 ABCC8Q09428 1581 aa10.9□□□□□ -0.67
MCF2L2-205ENST00000461074 HDAC5Q9UQL6 1122 aa10.89□□□□□ -0.67
MCF2L2-205ENST00000461074 EIF4G1Q04637 1599 aaKnown RBP10.89□□□□□ -0.67
MCF2L2-205ENST00000461074 SALL2Q9Y467 1007 aaPredicted RBP10.89□□□□□ -0.67
MCF2L2-205ENST00000461074 A0A0G2JS52 829 aa10.87□□□□□ -0.67
MCF2L2-205ENST00000461074 PTMSP20962 102 aa10.86□□□□□ -0.67
MCF2L2-205ENST00000461074 VPS8Q8N3P4 1428 aa10.86□□□□□ -0.67
MCF2L2-205ENST00000461074 RGL3Q3MIN7 710 aa10.86□□□□□ -0.67
MCF2L2-205ENST00000461074 ERICH6BQ5W0A0 696 aa10.86□□□□□ -0.67
MCF2L2-205ENST00000461074 ZBTB7CA1YPR0 619 aa10.86□□□□□ -0.67
MCF2L2-205ENST00000461074 MCCP23508 829 aa10.85□□□□□ -0.67
MCF2L2-205ENST00000461074 L1TD1Q5T7N2 865 aaKnown RBP10.85□□□□□ -0.67
MCF2L2-205ENST00000461074 CCER2I3L3R5 266 aa10.84□□□□□ -0.67
MCF2L2-205ENST00000461074 ANKRD30AQ9BXX3 1397 aa10.84□□□□□ -0.67
MCF2L2-205ENST00000461074 SETD5Q9C0A6 1442 aa10.84□□□□□ -0.67
MCF2L2-205ENST00000461074 TOP2AP11388 1531 aaKnown RBP10.84□□□□□ -0.67
MCF2L2-205ENST00000461074 EFCAB2Q5VUJ9 269 aa10.84□□□□□ -0.67
MCF2L2-205ENST00000461074 HDGFL2Q7Z4V5 671 aaPredicted RBP10.84□□□□□ -0.67
MCF2L2-205ENST00000461074 PPP4R2Q9NY27 417 aa10.83□□□□□ -0.68
MCF2L2-205ENST00000461074 IPO8O15397 1037 aaKnown RBP10.83□□□□□ -0.68
MCF2L2-205ENST00000461074 CCDC18Q5T9S5 1454 aa10.82□□□□□ -0.68
MCF2L2-205ENST00000461074 TNNT2P45379 298 aaPredicted RBP10.82□□□□□ -0.68
MCF2L2-205ENST00000461074 GOLGA2Q08379 1002 aa10.81□□□□□ -0.68
MCF2L2-205ENST00000461074 NPHP1O15259 732 aa10.81□□□□□ -0.68
MCF2L2-205ENST00000461074 ROCK2O75116 1388 aaKnown RBP10.81□□□□□ -0.68
MCF2L2-205ENST00000461074 SOGA1O94964 1423 aa10.8□□□□□ -0.68
MCF2L2-205ENST00000461074 KTN1Q86UP2 1357 aaKnown RBP10.8□□□□□ -0.68
MCF2L2-205ENST00000461074 OS9Q13438 667 aaPredicted RBP10.8□□□□□ -0.68
MCF2L2-205ENST00000461074 UACAQ9BZF9 1416 aa10.8□□□□□ -0.68
MCF2L2-205ENST00000461074 RALBP1Q15311 655 aa10.79□□□□□ -0.68
MCF2L2-205ENST00000461074 PHLDB1Q86UU1 1377 aa10.79□□□□□ -0.68
MCF2L2-205ENST00000461074 PTMAP06454 111 aaKnown RBP10.79□□□□□ -0.68
MCF2L2-205ENST00000461074 RTF1Q92541 710 aaKnown RBP10.79□□□□□ -0.68
MCF2L2-205ENST00000461074 MIER1Q8N108 512 aa10.78□□□□□ -0.68
MCF2L2-205ENST00000461074 FGD1P98174 961 aa10.77□□□□□ -0.68
MCF2L2-205ENST00000461074 MORC1Q86VD1 984 aa10.77□□□□□ -0.69
MCF2L2-205ENST00000461074 HTATSF1O43719 755 aaKnown RBP10.76□□□□□ -0.69
MCF2L2-205ENST00000461074 CCDC88BA6NC98 1476 aa10.76□□□□□ -0.69
MCF2L2-205ENST00000461074 KCNJ4P48050 445 aa10.76□□□□□ -0.69
MCF2L2-205ENST00000461074 SRPK2P78362 688 aaKnown RBP10.75□□□□□ -0.69
MCF2L2-205ENST00000461074 LMOD3Q0VAK6 560 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms