RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 MNX1P50219 401 aaPredicted RBP7.74□□□□□ -1.17
HPS3-203ENST00000460822 ASTLQ6HA08 431 aaPredicted RBP7.74□□□□□ -1.17
HPS3-203ENST00000460822 C7P10643 843 aa7.73□□□□□ -1.17
HPS3-203ENST00000460822 SLC39A7Q92504 469 aa7.73□□□□□ -1.17
HPS3-203ENST00000460822 MAMSTRQ6ZN01 415 aa7.72□□□□□ -1.17
HPS3-203ENST00000460822 PLEKHG5O94827 1062 aa7.71□□□□□ -1.17
HPS3-203ENST00000460822 ATMINO43313 823 aaPredicted RBP7.71□□□□□ -1.18
HPS3-203ENST00000460822 METRNQ9UJH8 293 aa7.7□□□□□ -1.18
HPS3-203ENST00000460822 POTEJP0CG39 1038 aa7.7□□□□□ -1.18
HPS3-203ENST00000460822 MS4A3Q96HJ5 214 aa7.68□□□□□ -1.18
HPS3-203ENST00000460822 FBXO3Q9UK99 471 aa7.68□□□□□ -1.18
HPS3-203ENST00000460822 MIER1Q8N108 512 aa7.67□□□□□ -1.18
HPS3-203ENST00000460822 PLCD3Q8N3E9 789 aa7.65□□□□□ -1.18
HPS3-203ENST00000460822 LCE2DQ5TA82 110 aaPredicted RBP7.63□□□□□ -1.19
HPS3-203ENST00000460822 SCUBE2Q9NQ36 999 aa7.62□□□□□ -1.19
HPS3-203ENST00000460822 FAM163AQ96GL9 167 aaPredicted RBP7.61□□□□□ -1.19
HPS3-203ENST00000460822 ATN1P54259 1190 aaPredicted RBP7.6□□□□□ -1.19
HPS3-203ENST00000460822 ZBTB47Q9UFB7 747 aaPredicted RBP7.59□□□□□ -1.2
HPS3-203ENST00000460822 CCDC61Q9Y6R9 512 aa7.58□□□□□ -1.2
HPS3-203ENST00000460822 KIF12Q96FN5 646 aa7.57□□□□□ -1.2
HPS3-203ENST00000460822 POTEFA5A3E0 1075 aa7.57□□□□□ -1.2
HPS3-203ENST00000460822 TSPYL2Q9H2G4 693 aaPredicted RBP7.56□□□□□ -1.2
HPS3-203ENST00000460822 BMP2KQ9NSY1 1161 aaPredicted RBP7.54□□□□□ -1.2
HPS3-203ENST00000460822 TIE1P35590 1138 aa7.53□□□□□ -1.2
HPS3-203ENST00000460822 VASPP50552 380 aaPredicted RBP7.51□□□□□ -1.21
HPS3-203ENST00000460822 KLHL34Q8N239 644 aa7.51□□□□□ -1.21
HPS3-203ENST00000460822 TRPC6Q9Y210 931 aa7.49□□□□□ -1.21
HPS3-203ENST00000460822 MAP3K13O43283 966 aa7.48□□□□□ -1.21
HPS3-203ENST00000460822 CDAN1Q8IWY9 1227 aa7.48□□□□□ -1.21
HPS3-203ENST00000460822 COLQQ9Y215 455 aaPredicted RBP7.46□□□□□ -1.22
HPS3-203ENST00000460822 TTLL13PA6NNM8 815 aa7.45□□□□□ -1.22
HPS3-203ENST00000460822 IER5LQ5T953 404 aa7.45□□□□□ -1.22
HPS3-203ENST00000460822 SEC24BO95487 1268 aa7.44□□□□□ -1.22
HPS3-203ENST00000460822 SGIP1Q9BQI5 828 aa7.44□□□□□ -1.22
HPS3-203ENST00000460822 FAM212AQ96EL1 285 aa7.43□□□□□ -1.22
HPS3-203ENST00000460822 RASEFQ8IZ41 740 aa7.42□□□□□ -1.22
HPS3-203ENST00000460822 NUBP1P53384 320 aa7.41□□□□□ -1.22
HPS3-203ENST00000460822 DCAF8Q5TAQ9 597 aa7.41□□□□□ -1.22
HPS3-203ENST00000460822 TRIM35Q9UPQ4 493 aa7.39□□□□□ -1.23
HPS3-203ENST00000460822 ST18O60284 1047 aa7.38□□□□□ -1.23
HPS3-203ENST00000460822 SPOCK2Q92563 424 aa7.38□□□□□ -1.23
HPS3-203ENST00000460822 SLAIN1Q8ND83 568 aa7.37□□□□□ -1.23
HPS3-203ENST00000460822 IFNLR1Q8IU57 520 aaPredicted RBP7.37□□□□□ -1.23
HPS3-203ENST00000460822 GSE1Q14687 1217 aa7.36□□□□□ -1.23
HPS3-203ENST00000460822 PCDHB13Q9Y5F0 798 aa7.35□□□□□ -1.23
HPS3-203ENST00000460822 CIZ1Q9ULV3 898 aaPredicted RBP7.32□□□□□ -1.24
HPS3-203ENST00000460822 MMRN1Q13201 1228 aa7.31□□□□□ -1.24
HPS3-203ENST00000460822 TMEM121BQ9BXQ6 578 aaPredicted RBP7.31□□□□□ -1.24
HPS3-203ENST00000460822 PLCG2P16885 1265 aa7.31□□□□□ -1.24
HPS3-203ENST00000460822 SPNS2Q8IVW8 549 aa7.31□□□□□ -1.24
HPS3-203ENST00000460822 IRX5P78411 483 aaPredicted RBP7.3□□□□□ -1.24
HPS3-203ENST00000460822 IFNL1Q8IU54 200 aa7.3□□□□□ -1.24
HPS3-203ENST00000460822 TMEM106CQ9BVX2 250 aa7.29□□□□□ -1.24
HPS3-203ENST00000460822 SNPHO15079 494 aa7.29□□□□□ -1.24
HPS3-203ENST00000460822 PYGBP11216 843 aa7.29□□□□□ -1.24
HPS3-203ENST00000460822 RTN4Q9NQC3 1192 aaKnown RBP7.29□□□□□ -1.24
HPS3-203ENST00000460822 OCEL1Q9H607 264 aa7.26□□□□□ -1.25
HPS3-203ENST00000460822 SLC24A1O60721 1099 aa7.24□□□□□ -1.25
HPS3-203ENST00000460822 AMER1Q5JTC6 1135 aaPredicted RBP7.24□□□□□ -1.25
HPS3-203ENST00000460822 TRIM41Q8WV44 630 aa7.23□□□□□ -1.25
HPS3-203ENST00000460822 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.23□□□□□ -1.25
HPS3-203ENST00000460822 ZNF467Q7Z7K2 595 aaPredicted RBP7.22□□□□□ -1.25
HPS3-203ENST00000460822 CHRM1P11229 460 aaPredicted RBP7.22□□□□□ -1.25
HPS3-203ENST00000460822 PCDHB8Q9UN66 801 aa7.2□□□□□ -1.26
HPS3-203ENST00000460822 MARVELD3Q96A59 401 aa7.17□□□□□ -1.26
HPS3-203ENST00000460822 GOLGA2Q08379 1002 aa7.15□□□□□ -1.27
HPS3-203ENST00000460822 L3MBTL3Q96JM7 780 aaPredicted RBP7.14□□□□□ -1.27
HPS3-203ENST00000460822 PSEN1P49768 467 aa7.13□□□□□ -1.27
HPS3-203ENST00000460822 PDAP1Q13442 181 aaKnown RBP7.13□□□□□ -1.27
HPS3-203ENST00000460822 EMP3P54852 163 aa7.12□□□□□ -1.27
HPS3-203ENST00000460822 ECM2O94769 699 aaPredicted RBP7.11□□□□□ -1.27
HPS3-203ENST00000460822 PDCD7Q8N8D1 485 aaKnown RBP7.11□□□□□ -1.27
HPS3-203ENST00000460822 KRTAP3-3Q9BYR6 98 aa7.11□□□□□ -1.27
HPS3-203ENST00000460822 KRTAP3-2Q9BYR7 98 aa7.11□□□□□ -1.27
HPS3-203ENST00000460822 POTEB3A0JP26 581 aa7.11□□□□□ -1.27
HPS3-203ENST00000460822 POTEBQ6S5H4 581 aa7.11□□□□□ -1.27
HPS3-203ENST00000460822 TAOK2Q9UL54 1235 aa7.11□□□□□ -1.27
HPS3-203ENST00000460822 HS3ST6Q96QI5 342 aa7.1□□□□□ -1.27
HPS3-203ENST00000460822 MKRN3Q13064 507 aaKnown RBP7.09□□□□□ -1.27
HPS3-203ENST00000460822 C3orf67Q6ZVT6 689 aa7.09□□□□□ -1.27
HPS3-203ENST00000460822 RIOK3O14730 519 aaKnown RBP7.09□□□□□ -1.27
HPS3-203ENST00000460822 FAM205CA6NFA0 338 aa7.07□□□□□ -1.28
HPS3-203ENST00000460822 VGFO15240 615 aaPredicted RBP7.06□□□□□ -1.28
HPS3-203ENST00000460822 ILDR1Q86SU0 546 aaPredicted RBP7.04□□□□□ -1.28
HPS3-203ENST00000460822 CABP2Q9NPB3 220 aa7.04□□□□□ -1.28
HPS3-203ENST00000460822 PKD2Q13563 968 aa7.04□□□□□ -1.28
HPS3-203ENST00000460822 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.04□□□□□ -1.282e-6■■■□□ 16.9
HPS3-203ENST00000460822 RNF25Q96BH1 459 aaPredicted RBP7.02□□□□□ -1.29
HPS3-203ENST00000460822 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.01□□□□□ -1.29
HPS3-203ENST00000460822 ZFP91Q96JP5 570 aaPredicted RBP7.01□□□□□ -1.29
HPS3-203ENST00000460822 HOXB3P14651 431 aaPredicted RBP6.99□□□□□ -1.29
HPS3-203ENST00000460822 HOXB1P14653 301 aaPredicted RBP6.99□□□□□ -1.29
HPS3-203ENST00000460822 RGL2O15211 777 aa6.99□□□□□ -1.29
HPS3-203ENST00000460822 G3V3G9 751 aa6.98□□□□□ -1.29
HPS3-203ENST00000460822 STK24Q9Y6E0 443 aa6.98□□□□□ -1.29
HPS3-203ENST00000460822 STK25O00506 426 aa6.97□□□□□ -1.29
HPS3-203ENST00000460822 EFCAB3Q8N7B9 438 aa6.97□□□□□ -1.29
HPS3-203ENST00000460822 BCL11BQ9C0K0 894 aaPredicted RBP6.97□□□□□ -1.29
HPS3-203ENST00000460822 DPY19L2Q6NUT2 758 aa6.95□□□□□ -1.3
HPS3-203ENST00000460822 SOX12O15370 315 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms