RNA–Protein interactions for RNA: ENST00000460520.1

PLOD2-203, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 2, humanhuman

TSL 3

Gene PLOD2, Length 530 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD2-203ENST00000460520 MS4A3Q96HJ5 214 aa16.79■□□□□ 0.28
PLOD2-203ENST00000460520 ATMINO43313 823 aaPredicted RBP16.77■□□□□ 0.28
PLOD2-203ENST00000460520 SLC39A7Q92504 469 aa16.73■□□□□ 0.27
PLOD2-203ENST00000460520 C7P10643 843 aa16.72■□□□□ 0.27
PLOD2-203ENST00000460520 PCDH10Q9P2E7 1040 aa16.71■□□□□ 0.27
PLOD2-203ENST00000460520 LCE2DQ5TA82 110 aaPredicted RBP16.69■□□□□ 0.26
PLOD2-203ENST00000460520 MAMSTRQ6ZN01 415 aa16.63■□□□□ 0.25
PLOD2-203ENST00000460520 ATN1P54259 1190 aaPredicted RBP16.58■□□□□ 0.24
PLOD2-203ENST00000460520 CCDC61Q9Y6R9 512 aa16.54■□□□□ 0.24
PLOD2-203ENST00000460520 TSPYL2Q9H2G4 693 aaPredicted RBP16.53■□□□□ 0.24
PLOD2-203ENST00000460520 POTEFA5A3E0 1075 aa16.52■□□□□ 0.24
PLOD2-203ENST00000460520 FAM163AQ96GL9 167 aaPredicted RBP16.52■□□□□ 0.24
PLOD2-203ENST00000460520 SCUBE2Q9NQ36 999 aa16.51■□□□□ 0.23
PLOD2-203ENST00000460520 KIF12Q96FN5 646 aa16.48■□□□□ 0.23
PLOD2-203ENST00000460520 BMP2KQ9NSY1 1161 aaPredicted RBP16.46■□□□□ 0.23
PLOD2-203ENST00000460520 TRPC6Q9Y210 931 aa16.46■□□□□ 0.23
PLOD2-203ENST00000460520 PROM2Q8N271 834 aa16.41■□□□□ 0.22
PLOD2-203ENST00000460520 TIE1P35590 1138 aa16.34■□□□□ 0.21
PLOD2-203ENST00000460520 MAP3K13O43283 966 aa16.33■□□□□ 0.2
PLOD2-203ENST00000460520 COLQQ9Y215 455 aaPredicted RBP16.32■□□□□ 0.2
PLOD2-203ENST00000460520 RASEFQ8IZ41 740 aa16.26■□□□□ 0.19
PLOD2-203ENST00000460520 TTLL13PA6NNM8 815 aa16.25■□□□□ 0.19
PLOD2-203ENST00000460520 EHMT2Q96KQ7 1210 aa16.23■□□□□ 0.19
PLOD2-203ENST00000460520 CDAN1Q8IWY9 1227 aa16.21■□□□□ 0.19
PLOD2-203ENST00000460520 SEC24BO95487 1268 aa16.19■□□□□ 0.18
PLOD2-203ENST00000460520 IER5LQ5T953 404 aa16.14■□□□□ 0.17
PLOD2-203ENST00000460520 TRIM35Q9UPQ4 493 aa16.14■□□□□ 0.17
PLOD2-203ENST00000460520 MIER1Q8N108 512 aa16.1■□□□□ 0.17
PLOD2-203ENST00000460520 ST18O60284 1047 aa16.07■□□□□ 0.16
PLOD2-203ENST00000460520 SGIP1Q9BQI5 828 aa16.07■□□□□ 0.16
PLOD2-203ENST00000460520 PLEKHG5O94827 1062 aa16.06■□□□□ 0.16
PLOD2-203ENST00000460520 SLAIN1Q8ND83 568 aa16.04■□□□□ 0.16
PLOD2-203ENST00000460520 PCDHB13Q9Y5F0 798 aa16.04■□□□□ 0.16
PLOD2-203ENST00000460520 IFNL1Q8IU54 200 aa15.98■□□□□ 0.15
PLOD2-203ENST00000460520 NUBP1P53384 320 aa15.95■□□□□ 0.14
PLOD2-203ENST00000460520 TMEM106CQ9BVX2 250 aa15.92■□□□□ 0.14
PLOD2-203ENST00000460520 IRX5P78411 483 aaPredicted RBP15.91■□□□□ 0.14
PLOD2-203ENST00000460520 PLCG2P16885 1265 aa15.9■□□□□ 0.14
PLOD2-203ENST00000460520 MMRN1Q13201 1228 aa15.88■□□□□ 0.13
PLOD2-203ENST00000460520 PLCD3Q8N3E9 789 aa15.88■□□□□ 0.13
PLOD2-203ENST00000460520 SPNS2Q8IVW8 549 aa15.86■□□□□ 0.13
PLOD2-203ENST00000460520 TMEM121BQ9BXQ6 578 aaPredicted RBP15.81■□□□□ 0.12
PLOD2-203ENST00000460520 ZBTB47Q9UFB7 747 aaPredicted RBP15.78■□□□□ 0.12
PLOD2-203ENST00000460520 FAM212AQ96EL1 285 aa15.77■□□□□ 0.12
PLOD2-203ENST00000460520 OCEL1Q9H607 264 aa15.76■□□□□ 0.11
PLOD2-203ENST00000460520 MARVELD3Q96A59 401 aa15.73■□□□□ 0.11
PLOD2-203ENST00000460520 SNPHO15079 494 aa15.7■□□□□ 0.1
PLOD2-203ENST00000460520 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.69■□□□□ 0.1
PLOD2-203ENST00000460520 PYGBP11216 843 aa15.6■□□□□ 0.09
PLOD2-203ENST00000460520 PCDHB8Q9UN66 801 aa15.6■□□□□ 0.09
PLOD2-203ENST00000460520 PDCD7Q8N8D1 485 aaKnown RBP15.58■□□□□ 0.08
PLOD2-203ENST00000460520 POTEB3A0JP26 581 aa15.54■□□□□ 0.08
PLOD2-203ENST00000460520 POTEBQ6S5H4 581 aa15.54■□□□□ 0.08
PLOD2-203ENST00000460520 KRTAP3-3Q9BYR6 98 aa15.54■□□□□ 0.08
PLOD2-203ENST00000460520 KRTAP3-2Q9BYR7 98 aa15.54■□□□□ 0.08
PLOD2-203ENST00000460520 DCAF8Q5TAQ9 597 aa15.53■□□□□ 0.08
PLOD2-203ENST00000460520 EMP3P54852 163 aa15.52■□□□□ 0.08
PLOD2-203ENST00000460520 C3orf67Q6ZVT6 689 aa15.47■□□□□ 0.07
PLOD2-203ENST00000460520 HS3ST6Q96QI5 342 aa15.47■□□□□ 0.07
PLOD2-203ENST00000460520 FAM205CA6NFA0 338 aa15.42■□□□□ 0.06
PLOD2-203ENST00000460520 L3MBTL3Q96JM7 780 aaPredicted RBP15.42■□□□□ 0.06
PLOD2-203ENST00000460520 MKRN3Q13064 507 aaKnown RBP15.37■□□□□ 0.05
PLOD2-203ENST00000460520 ZNF467Q7Z7K2 595 aaPredicted RBP15.34■□□□□ 0.05
PLOD2-203ENST00000460520 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.34■□□□□ 0.052e-12■■□□□ 13.2
PLOD2-203ENST00000460520 GOLGA2Q08379 1002 aa15.32■□□□□ 0.04
PLOD2-203ENST00000460520 ILDR1Q86SU0 546 aaPredicted RBP15.32■□□□□ 0.04
PLOD2-203ENST00000460520 FKBP8Q14318 412 aa15.3■□□□□ 0.04
PLOD2-203ENST00000460520 HOXB3P14651 431 aaPredicted RBP15.27■□□□□ 0.04
PLOD2-203ENST00000460520 CHRM1P11229 460 aaPredicted RBP15.25■□□□□ 0.03
PLOD2-203ENST00000460520 PSEN1P49768 467 aa15.25■□□□□ 0.03
PLOD2-203ENST00000460520 DPY19L2Q6NUT2 758 aa15.25■□□□□ 0.03
PLOD2-203ENST00000460520 GSE1Q14687 1217 aa15.23■□□□□ 0.03
PLOD2-203ENST00000460520 HOXB1P14653 301 aaPredicted RBP15.17■□□□□ 0.02
PLOD2-203ENST00000460520 FBXO3Q9UK99 471 aa15.14■□□□□ 0.01
PLOD2-203ENST00000460520 BOLA1Q9Y3E2 137 aa15.14■□□□□ 0.01
PLOD2-203ENST00000460520 PDAP1Q13442 181 aaKnown RBP15.11■□□□□ 0.01
PLOD2-203ENST00000460520 KLHL34Q8N239 644 aa15.1■□□□□ 0.01
PLOD2-203ENST00000460520 RNF166Q96A37 237 aaPredicted RBP15.09■□□□□ 0.01
PLOD2-203ENST00000460520 ERBB3P21860 1342 aa15.08■□□□□ 0
PLOD2-203ENST00000460520 ZNF710Q8N1W2 664 aa15.07■□□□□ 0
PLOD2-203ENST00000460520 CABP2Q9NPB3 220 aa15.07■□□□□ 0
PLOD2-203ENST00000460520 VASPP50552 380 aaPredicted RBP15.06■□□□□ 0
PLOD2-203ENST00000460520 DOK7Q18PE1 504 aa15.04■□□□□ -0
PLOD2-203ENST00000460520 G3V3G9 751 aa15.03■□□□□ -0
PLOD2-203ENST00000460520 VARS2Q5ST30 1063 aaKnown RBP14.99□□□□□ -0.01
PLOD2-203ENST00000460520 MYT1LQ9UL68 1186 aa14.98□□□□□ -0.01
PLOD2-203ENST00000460520 RIMBP2O15034 1052 aa14.9□□□□□ -0.02
PLOD2-203ENST00000460520 ZNF687Q8N1G0 1237 aa14.9□□□□□ -0.02
PLOD2-203ENST00000460520 TMEM92Q6UXU6 159 aa14.89□□□□□ -0.03
PLOD2-203ENST00000460520 ZSWIM6Q9HCJ5 1215 aa14.86□□□□□ -0.03
PLOD2-203ENST00000460520 GPR153Q6NV75 609 aa14.85□□□□□ -0.03
PLOD2-203ENST00000460520 EFCAB3Q8N7B9 438 aa14.83□□□□□ -0.04
PLOD2-203ENST00000460520 MICALL2Q8IY33 904 aa14.82□□□□□ -0.04
PLOD2-203ENST00000460520 CIZ1Q9ULV3 898 aaPredicted RBP14.81□□□□□ -0.04
PLOD2-203ENST00000460520 PTGER2P43116 358 aa14.8□□□□□ -0.04
PLOD2-203ENST00000460520 SPOCK2Q92563 424 aa14.79□□□□□ -0.04
PLOD2-203ENST00000460520 IFNLR1Q8IU57 520 aaPredicted RBP14.75□□□□□ -0.05
PLOD2-203ENST00000460520 ANKRD13DQ6ZTN6 518 aa14.7□□□□□ -0.06
PLOD2-203ENST00000460520 ARSIQ5FYB1 569 aa14.69□□□□□ -0.06
PLOD2-203ENST00000460520 MS4A4AQ96JQ5 239 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms