RNA–Protein interactions for RNA: ENST00000459752.5

PATJ-204, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 5,349 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-204ENST00000459752 P3H3Q8IVL6 736 aa11.28□□□□□ -0.6
PATJ-204ENST00000459752 BAZ1AQ9NRL2 1556 aaPredicted RBP11.27□□□□□ -0.61
PATJ-204ENST00000459752 NOP58Q9Y2X3 529 aaKnown RBP11.27□□□□□ -0.61
PATJ-204ENST00000459752 RTN4Q9NQC3 1192 aaKnown RBP11.27□□□□□ -0.61
PATJ-204ENST00000459752 PABPN1Q86U42 306 aaKnown RBP eCLIP11.26□□□□□ -0.61
PATJ-204ENST00000459752 CHGAP10645 457 aaKnown RBP11.24□□□□□ -0.61
PATJ-204ENST00000459752 FBLN2P98095 1184 aa11.24□□□□□ -0.61
PATJ-204ENST00000459752 CASC1Q6TDU7 716 aa11.24□□□□□ -0.61
PATJ-204ENST00000459752 NRDCO43847 1150 aa11.24□□□□□ -0.61
PATJ-204ENST00000459752 GOLGA6L6A8MZA4 724 aa11.23□□□□□ -0.61
PATJ-204ENST00000459752 PPP4R2Q9NY27 417 aa11.23□□□□□ -0.61
PATJ-204ENST00000459752 EIF4G2P78344 907 aaKnown RBP eCLIP11.22□□□□□ -0.61
PATJ-204ENST00000459752 STAG3Q9UJ98 1225 aa11.22□□□□□ -0.61
PATJ-204ENST00000459752 L1TD1Q5T7N2 865 aaKnown RBP11.22□□□□□ -0.61
PATJ-204ENST00000459752 ESF1Q9H501 851 aaKnown RBP11.22□□□□□ -0.61
PATJ-204ENST00000459752 CHAF1AQ13111 956 aaPredicted RBP11.22□□□□□ -0.61
PATJ-204ENST00000459752 ARID3CA6NKF2 412 aa11.21□□□□□ -0.61
PATJ-204ENST00000459752 LAS1LQ9Y4W2 734 aaKnown RBP11.21□□□□□ -0.61
PATJ-204ENST00000459752 SUPT16HQ9Y5B9 1047 aaKnown RBP11.19□□□□□ -0.62
PATJ-204ENST00000459752 DEKP35659 375 aaKnown RBP11.18□□□□□ -0.62
PATJ-204ENST00000459752 MSNP26038 577 aaKnown RBP11.17□□□□□ -0.62
PATJ-204ENST00000459752 PLCB2Q00722 1185 aa11.16□□□□□ -0.62
PATJ-204ENST00000459752 UNC13AQ9UPW8 1703 aa11.15□□□□□ -0.62
PATJ-204ENST00000459752 SMARCA2P51531 1590 aa11.14□□□□□ -0.63
PATJ-204ENST00000459752 CHMP4BQ9H444 224 aaKnown RBP11.13□□□□□ -0.63
PATJ-204ENST00000459752 HSP90AB1P08238 724 aaKnown RBP11.13□□□□□ -0.63
PATJ-204ENST00000459752 KDM2AQ9Y2K7 1162 aa11.13□□□□□ -0.63
PATJ-204ENST00000459752 FTSJ3Q8IY81 847 aaKnown RBP11.13□□□□□ -0.63
PATJ-204ENST00000459752 CFAP53Q96M91 514 aa11.12□□□□□ -0.63
PATJ-204ENST00000459752 CHIC2Q9UKJ5 165 aa11.11□□□□□ -0.63
PATJ-204ENST00000459752 TSPY4P0CV99 314 aa11.11□□□□□ -0.63
PATJ-204ENST00000459752 TSPY10P0CW01 314 aa11.11□□□□□ -0.63
PATJ-204ENST00000459752 SMARCA4P51532 1647 aa11.1□□□□□ -0.63
PATJ-204ENST00000459752 MS4A1P11836 297 aa11.1□□□□□ -0.63
PATJ-204ENST00000459752 HIRIP3Q9BW71 556 aaPredicted RBP11.1□□□□□ -0.63
PATJ-204ENST00000459752 RGS3P49796 1198 aa11.1□□□□□ -0.63
PATJ-204ENST00000459752 RSF1Q96T23 1441 aaPredicted RBP11.1□□□□□ -0.63
PATJ-204ENST00000459752 TPRNQ4KMQ1 711 aa11.09□□□□□ -0.63
PATJ-204ENST00000459752 CDCA8Q53HL2 280 aa11.09□□□□□ -0.63
PATJ-204ENST00000459752 HSCBQ8IWL3 235 aa11.09□□□□□ -0.63
PATJ-204ENST00000459752 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.08□□□□□ -0.643e-6■□□□□ 11.3
PATJ-204ENST00000459752 BICRAQ9NZM4 1560 aa11.08□□□□□ -0.64
PATJ-204ENST00000459752 GOLGA6L4A6NEF3 574 aa11.08□□□□□ -0.64
PATJ-204ENST00000459752 PTMSP20962 102 aa11.07□□□□□ -0.64
PATJ-204ENST00000459752 PNNQ9H307 717 aaKnown RBP11.07□□□□□ -0.64
PATJ-204ENST00000459752 TNNT3P45378 269 aaPredicted RBP11.06□□□□□ -0.64
PATJ-204ENST00000459752 AMER1Q5JTC6 1135 aaPredicted RBP11.06□□□□□ -0.64
PATJ-204ENST00000459752 CFAP44Q96MT7 982 aa11.05□□□□□ -0.64
PATJ-204ENST00000459752 KNSTRNQ9Y448 316 aa11.05□□□□□ -0.64
PATJ-204ENST00000459752 KIAA2012Q0VF49 1180 aa11.04□□□□□ -0.64
PATJ-204ENST00000459752 RBM19Q9Y4C8 960 aaKnown RBP11.04□□□□□ -0.64
PATJ-204ENST00000459752 BAZ1BQ9UIG0 1483 aaKnown RBP11.03□□□□□ -0.64
PATJ-204ENST00000459752 FGD1P98174 961 aa11.03□□□□□ -0.64
PATJ-204ENST00000459752 DRC7Q8IY82 874 aa11.03□□□□□ -0.64
PATJ-204ENST00000459752 MTUS2Q5JR59 1369 aa11.03□□□□□ -0.64
PATJ-204ENST00000459752 B4GALNT3Q6L9W6 998 aa11.02□□□□□ -0.65
PATJ-204ENST00000459752 TOP2AP11388 1531 aaKnown RBP11.02□□□□□ -0.65
PATJ-204ENST00000459752 GBP4Q96PP9 640 aa11.01□□□□□ -0.65
PATJ-204ENST00000459752 MAPK8IP3Q9UPT6 1336 aa11□□□□□ -0.65
PATJ-204ENST00000459752 NUDCQ9Y266 331 aa11□□□□□ -0.65
PATJ-204ENST00000459752 CECR2Q9BXF3 1484 aa11□□□□□ -0.65
PATJ-204ENST00000459752 MROH2BQ7Z745 1585 aa11□□□□□ -0.65
PATJ-204ENST00000459752 MCCP23508 829 aa11□□□□□ -0.65
PATJ-204ENST00000459752 NPM1P06748 294 aaKnown RBP eCLIP10.99□□□□□ -0.65
PATJ-204ENST00000459752 KCNJ4P48050 445 aa10.99□□□□□ -0.65
PATJ-204ENST00000459752 FRAT1Q92837 279 aaPredicted RBP10.99□□□□□ -0.65
PATJ-204ENST00000459752 ARID4BQ4LE39 1312 aaPredicted RBP10.99□□□□□ -0.65
PATJ-204ENST00000459752 EIF4G1Q04637 1599 aaKnown RBP10.96□□□□□ -0.66
PATJ-204ENST00000459752 TULP1O00294 542 aaPredicted RBP10.95□□□□□ -0.66
PATJ-204ENST00000459752 NEUROD2Q15784 382 aa10.95□□□□□ -0.66
PATJ-204ENST00000459752 SYAP1Q96A49 352 aaPredicted RBP10.95□□□□□ -0.66
PATJ-204ENST00000459752 CCER2I3L3R5 266 aa10.94□□□□□ -0.66
PATJ-204ENST00000459752 OS9Q13438 667 aaPredicted RBP10.94□□□□□ -0.66
PATJ-204ENST00000459752 CARD11Q9BXL7 1154 aa10.94□□□□□ -0.66
PATJ-204ENST00000459752 CLIP1P30622 1438 aa10.94□□□□□ -0.66
PATJ-204ENST00000459752 GOLGA6L3A6NEY3 463 aa10.94□□□□□ -0.66
PATJ-204ENST00000459752 RRP7BPQ9NSQ0 103 aa10.94□□□□□ -0.66
PATJ-204ENST00000459752 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.94□□□□□ -0.66
PATJ-204ENST00000459752 A0A0G2JS52 829 aa10.94□□□□□ -0.66
PATJ-204ENST00000459752 USP35Q9P2H5 1018 aa10.94□□□□□ -0.66
PATJ-204ENST00000459752 TCERG1O14776 1098 aaKnown RBP10.93□□□□□ -0.66
PATJ-204ENST00000459752 NAP1L2Q9ULW6 460 aaPredicted RBP10.93□□□□□ -0.66
PATJ-204ENST00000459752 GOLGA6L1Q8N7Z2 621 aa10.93□□□□□ -0.66
PATJ-204ENST00000459752 RSPH6AQ9H0K4 717 aa10.93□□□□□ -0.66
PATJ-204ENST00000459752 HMGXB3Q12766 1538 aa10.93□□□□□ -0.66
PATJ-204ENST00000459752 PEG3Q9GZU2 1588 aa10.92□□□□□ -0.66
PATJ-204ENST00000459752 SENP3-EIF4A1A0A087X0R7 540 aa10.92□□□□□ -0.66
PATJ-204ENST00000459752 HSP90AA2PQ14568 343 aaPredicted RBP10.92□□□□□ -0.66
PATJ-204ENST00000459752 ATAD2BQ9ULI0 1458 aa10.92□□□□□ -0.66
PATJ-204ENST00000459752 HTATSF1O43719 755 aaKnown RBP10.92□□□□□ -0.66
PATJ-204ENST00000459752 C14orf37Q86TY3 774 aa10.92□□□□□ -0.66
PATJ-204ENST00000459752 ZBTB7CA1YPR0 619 aa10.91□□□□□ -0.66
PATJ-204ENST00000459752 WIZO95785 1651 aa10.91□□□□□ -0.66
PATJ-204ENST00000459752 SPRYD3Q8NCJ5 442 aa10.9□□□□□ -0.66
PATJ-204ENST00000459752 PPP1R15AO75807 674 aaPredicted RBP10.9□□□□□ -0.67
PATJ-204ENST00000459752 HAP1P54257 671 aaPredicted RBP10.9□□□□□ -0.67
PATJ-204ENST00000459752 RGL3Q3MIN7 710 aa10.89□□□□□ -0.67
PATJ-204ENST00000459752 NCAPD3P42695 1498 aa10.89□□□□□ -0.67
PATJ-204ENST00000459752 PLPPR3Q6T4P5 718 aa10.89□□□□□ -0.67
PATJ-204ENST00000459752 ARID3AQ99856 593 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms