RNA–Protein interactions for RNA: ENST00000458893.1

SNORD42B-201, Transcript of small nucleolar RNA, C/D box 42B, humanhuman

BASIC

Gene SNORD42B, Length 67 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42B-201ENST00000458893 KCNA4P22459 653 aa3.07□□□□□ -1.92
SNORD42B-201ENST00000458893 SEC24BO95487 1268 aa3.06□□□□□ -1.92
SNORD42B-201ENST00000458893 NPM1P06748 294 aaKnown RBP eCLIP3.04□□□□□ -1.92
SNORD42B-201ENST00000458893 SLAIN1Q8ND83 568 aa3.04□□□□□ -1.92
SNORD42B-201ENST00000458893 TMEM121BQ9BXQ6 578 aaPredicted RBP3.04□□□□□ -1.92
SNORD42B-201ENST00000458893 FOXD4L1Q9NU39 408 aa3.04□□□□□ -1.92
SNORD42B-201ENST00000458893 SNPHO15079 494 aa3.03□□□□□ -1.92
SNORD42B-201ENST00000458893 MS4A3Q96HJ5 214 aa3.03□□□□□ -1.92
SNORD42B-201ENST00000458893 ATN1P54259 1190 aaPredicted RBP3.02□□□□□ -1.93
SNORD42B-201ENST00000458893 CREBZFQ9NS37 354 aa3□□□□□ -1.93
SNORD42B-201ENST00000458893 STAG3Q9UJ98 1225 aa3□□□□□ -1.93
SNORD42B-201ENST00000458893 ATXN8OSP0DMR3 200 aa2.99□□□□□ -1.93
SNORD42B-201ENST00000458893 MKRN4PQ13434 485 aaPredicted RBP2.99□□□□□ -1.93
SNORD42B-201ENST00000458893 MARVELD3Q96A59 401 aa2.99□□□□□ -1.93
SNORD42B-201ENST00000458893 EMP3P54852 163 aa2.98□□□□□ -1.93
SNORD42B-201ENST00000458893 RNF166Q96A37 237 aaPredicted RBP2.97□□□□□ -1.93
SNORD42B-201ENST00000458893 POTEFA5A3E0 1075 aa2.96□□□□□ -1.94
SNORD42B-201ENST00000458893 BMP2KQ9NSY1 1161 aaPredicted RBP2.95□□□□□ -1.94
SNORD42B-201ENST00000458893 FAM205CA6NFA0 338 aa2.94□□□□□ -1.94
SNORD42B-201ENST00000458893 TIE1P35590 1138 aa2.94□□□□□ -1.94
SNORD42B-201ENST00000458893 COLQQ9Y215 455 aaPredicted RBP2.94□□□□□ -1.94
SNORD42B-201ENST00000458893 PLCG2P16885 1265 aa2.93□□□□□ -1.94
SNORD42B-201ENST00000458893 IER5LQ5T953 404 aa2.93□□□□□ -1.94
SNORD42B-201ENST00000458893 HS3ST6Q96QI5 342 aa2.93□□□□□ -1.94
SNORD42B-201ENST00000458893 TSPYL2Q9H2G4 693 aaPredicted RBP2.93□□□□□ -1.94
SNORD42B-201ENST00000458893 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.93□□□□□ -1.94
SNORD42B-201ENST00000458893 KRTAP3-3Q9BYR6 98 aa2.92□□□□□ -1.94
SNORD42B-201ENST00000458893 KRTAP3-2Q9BYR7 98 aa2.92□□□□□ -1.94
SNORD42B-201ENST00000458893 MYT1LQ9UL68 1186 aa2.91□□□□□ -1.94
SNORD42B-201ENST00000458893 TTLL13PA6NNM8 815 aa2.9□□□□□ -1.95
SNORD42B-201ENST00000458893 TRIM35Q9UPQ4 493 aa2.9□□□□□ -1.95
SNORD42B-201ENST00000458893 KIF12Q96FN5 646 aa2.89□□□□□ -1.95
SNORD42B-201ENST00000458893 SLC4A1APQ9BWU0 796 aaKnown RBP2.89□□□□□ -1.95
SNORD42B-201ENST00000458893 MAP3K13O43283 966 aa2.87□□□□□ -1.95
SNORD42B-201ENST00000458893 PTGER2P43116 358 aa2.87□□□□□ -1.95
SNORD42B-201ENST00000458893 TRPC6Q9Y210 931 aa2.87□□□□□ -1.95
SNORD42B-201ENST00000458893 CCDC61Q9Y6R9 512 aa2.87□□□□□ -1.95
SNORD42B-201ENST00000458893 C3orf67Q6ZVT6 689 aa2.86□□□□□ -1.95
SNORD42B-201ENST00000458893 PLA2G2EQ9NZK7 142 aa2.86□□□□□ -1.95
SNORD42B-201ENST00000458893 POTEB3A0JP26 581 aa2.85□□□□□ -1.95
SNORD42B-201ENST00000458893 MNX1P50219 401 aaPredicted RBP2.85□□□□□ -1.95
SNORD42B-201ENST00000458893 POTEBQ6S5H4 581 aa2.85□□□□□ -1.95
SNORD42B-201ENST00000458893 ERBB3P21860 1342 aa2.85□□□□□ -1.95
SNORD42B-201ENST00000458893 ZNF710Q8N1W2 664 aa2.84□□□□□ -1.95
SNORD42B-201ENST00000458893 OCEL1Q9H607 264 aa2.84□□□□□ -1.95
SNORD42B-201ENST00000458893 PLEKHG5O94827 1062 aa2.83□□□□□ -1.96
SNORD42B-201ENST00000458893 IRX2Q9BZI1 471 aaPredicted RBP2.83□□□□□ -1.96
SNORD42B-201ENST00000458893 PCDHB13Q9Y5F0 798 aa2.83□□□□□ -1.96
SNORD42B-201ENST00000458893 SGIP1Q9BQI5 828 aa2.82□□□□□ -1.96
SNORD42B-201ENST00000458893 TMEM106CQ9BVX2 250 aa2.82□□□□□ -1.96
SNORD42B-201ENST00000458893 IRX5P78411 483 aaPredicted RBP2.81□□□□□ -1.96
SNORD42B-201ENST00000458893 L3MBTL3Q96JM7 780 aaPredicted RBP2.81□□□□□ -1.96
SNORD42B-201ENST00000458893 ANKRD13DQ6ZTN6 518 aa2.8□□□□□ -1.96
SNORD42B-201ENST00000458893 HCSTQ9UBK5 93 aa2.79□□□□□ -1.96
SNORD42B-201ENST00000458893 G3V3G9 751 aa2.78□□□□□ -1.96
SNORD42B-201ENST00000458893 RIMBP2O15034 1052 aa2.78□□□□□ -1.96
SNORD42B-201ENST00000458893 HOXB1P14653 301 aaPredicted RBP2.78□□□□□ -1.96
SNORD42B-201ENST00000458893 VARS2Q5ST30 1063 aaKnown RBP2.78□□□□□ -1.96
SNORD42B-201ENST00000458893 DCAF8Q5TAQ9 597 aa2.78□□□□□ -1.96
SNORD42B-201ENST00000458893 DOK7Q18PE1 504 aa2.77□□□□□ -1.97
SNORD42B-201ENST00000458893 ZBTB22O15209 634 aa2.76□□□□□ -1.97
SNORD42B-201ENST00000458893 RGS20O76081 388 aa2.76□□□□□ -1.97
SNORD42B-201ENST00000458893 GOLGA2Q08379 1002 aa2.76□□□□□ -1.97
SNORD42B-201ENST00000458893 Q6ZNB5 142 aa2.76□□□□□ -1.97
SNORD42B-201ENST00000458893 ZNF687Q8N1G0 1237 aa2.76□□□□□ -1.97
SNORD42B-201ENST00000458893 SPDYE4A6NLX3 237 aa2.75□□□□□ -1.97
SNORD42B-201ENST00000458893 IFNL1Q8IU54 200 aa2.75□□□□□ -1.97
SNORD42B-201ENST00000458893 MKRN3Q13064 507 aaKnown RBP2.74□□□□□ -1.97
SNORD42B-201ENST00000458893 RASEFQ8IZ41 740 aa2.73□□□□□ -1.97
SNORD42B-201ENST00000458893 MIER1Q8N108 512 aa2.72□□□□□ -1.97
SNORD42B-201ENST00000458893 HOXB3P14651 431 aaPredicted RBP2.7□□□□□ -1.98
SNORD42B-201ENST00000458893 LSM11P83369 360 aaKnown RBP eCLIP2.7□□□□□ -1.98
SNORD42B-201ENST00000458893 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.7□□□□□ -1.98
SNORD42B-201ENST00000458893 PDCD7Q8N8D1 485 aaKnown RBP2.69□□□□□ -1.98
SNORD42B-201ENST00000458893 FAM212AQ96EL1 285 aa2.69□□□□□ -1.98
SNORD42B-201ENST00000458893 STAC3Q96MF2 364 aa2.69□□□□□ -1.98
SNORD42B-201ENST00000458893 ZSWIM6Q9HCJ5 1215 aa2.69□□□□□ -1.98
SNORD42B-201ENST00000458893 ZBTB47Q9UFB7 747 aaPredicted RBP2.69□□□□□ -1.98
SNORD42B-201ENST00000458893 LAPTM4AQ15012 233 aa2.66□□□□□ -1.98
SNORD42B-201ENST00000458893 PLCD3Q8N3E9 789 aa2.66□□□□□ -1.98
SNORD42B-201ENST00000458893 BOLA1Q9Y3E2 137 aa2.66□□□□□ -1.98
SNORD42B-201ENST00000458893 PBX2P40425 430 aa2.65□□□□□ -1.99
SNORD42B-201ENST00000458893 TRAF7Q6Q0C0 670 aa2.65□□□□□ -1.99
SNORD42B-201ENST00000458893 ZNF316A6NFI3 1004 aaPredicted RBP2.64□□□□□ -1.99
SNORD42B-201ENST00000458893 A0A0G2JS52 829 aa2.63□□□□□ -1.99
SNORD42B-201ENST00000458893 IFFO2Q5TF58 517 aa2.63□□□□□ -1.99
SNORD42B-201ENST00000458893 ZNF787Q6DD87 383 aa2.63□□□□□ -1.99
SNORD42B-201ENST00000458893 KCTD12Q96CX2 325 aaKnown RBP2.63□□□□□ -1.99
SNORD42B-201ENST00000458893 PCDHB8Q9UN66 801 aa2.63□□□□□ -1.99
SNORD42B-201ENST00000458893 PYGBP11216 843 aa2.62□□□□□ -1.99
SNORD42B-201ENST00000458893 PTPN5P54829 565 aa2.62□□□□□ -1.99
SNORD42B-201ENST00000458893 GPR153Q6NV75 609 aa2.62□□□□□ -1.99
SNORD42B-201ENST00000458893 ADGRD1Q6QNK2 874 aa2.62□□□□□ -1.99
SNORD42B-201ENST00000458893 ARSIQ5FYB1 569 aa2.61□□□□□ -1.99
SNORD42B-201ENST00000458893 ZNF467Q7Z7K2 595 aaPredicted RBP2.61□□□□□ -1.99
SNORD42B-201ENST00000458893 NUBP1P53384 320 aa2.6□□□□□ -1.99
SNORD42B-201ENST00000458893 DPY19L2Q6NUT2 758 aa2.6□□□□□ -1.99
SNORD42B-201ENST00000458893 AXIN2Q9Y2T1 843 aa2.6□□□□□ -1.99
SNORD42B-201ENST00000458893 GFRA3O60609 400 aa2.59□□□□□ -1.99
SNORD42B-201ENST00000458893 ZNF775Q96BV0 537 aaPredicted RBP2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms