RNA–Protein interactions for RNA: ENST00000458420.7

CLSTN2-201, Transcript of calsyntenin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLSTN2, Length 14,202 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN2-201ENST00000458420 CHMP7Q8WUX9 453 aaPredicted RBP9.54□□□□□ -0.88
CLSTN2-201ENST00000458420 EIF5BO60841 1220 aaKnown RBP9.54□□□□□ -0.88
CLSTN2-201ENST00000458420 SENP3-EIF4A1A0A087X0R7 540 aa9.53□□□□□ -0.88
CLSTN2-201ENST00000458420 TMC1Q8TDI8 760 aa9.53□□□□□ -0.88
CLSTN2-201ENST00000458420 GOLGA2Q08379 1002 aa9.53□□□□□ -0.88
CLSTN2-201ENST00000458420 ANO8Q9HCE9 1232 aaPredicted RBP9.52□□□□□ -0.89
CLSTN2-201ENST00000458420 ZNF330Q9Y3S2 320 aaPredicted RBP9.49□□□□□ -0.89
CLSTN2-201ENST00000458420 LAS1LQ9Y4W2 734 aaKnown RBP9.49□□□□□ -0.89
CLSTN2-201ENST00000458420 FAM9BQ8IZU0 186 aa9.48□□□□□ -0.89
CLSTN2-201ENST00000458420 NAP1L2Q9ULW6 460 aaPredicted RBP9.47□□□□□ -0.89
CLSTN2-201ENST00000458420 WDR43Q15061 677 aaKnown RBP eCLIP9.45□□□□□ -0.9
CLSTN2-201ENST00000458420 NBR1Q14596 966 aa9.44□□□□□ -0.9
CLSTN2-201ENST00000458420 RGL3Q3MIN7 710 aa9.44□□□□□ -0.9
CLSTN2-201ENST00000458420 UPF2Q9HAU5 1272 aaKnown RBP9.44□□□□□ -0.9
CLSTN2-201ENST00000458420 ANP32AP39687 249 aaKnown RBP9.44□□□□□ -0.9
CLSTN2-201ENST00000458420 MYH16Q9H6N6 1097 aa9.44□□□□□ -0.9
CLSTN2-201ENST00000458420 MSH5O43196 834 aa9.43□□□□□ -0.9
CLSTN2-201ENST00000458420 PDE4CQ08493 712 aa9.42□□□□□ -0.9
CLSTN2-201ENST00000458420 G3V3G9 751 aa9.41□□□□□ -0.9
CLSTN2-201ENST00000458420 DCAF8Q5TAQ9 597 aa9.41□□□□□ -0.9
CLSTN2-201ENST00000458420 FBXO3Q9UK99 471 aa9.41□□□□□ -0.9
CLSTN2-201ENST00000458420 TMX4Q9H1E5 349 aaPredicted RBP9.41□□□□□ -0.9
CLSTN2-201ENST00000458420 PAK3O75914 559 aaPredicted RBP9.41□□□□□ -0.9
CLSTN2-201ENST00000458420 MEX3CQ5U5Q3 659 aaKnown RBP9.4□□□□□ -0.9
CLSTN2-201ENST00000458420 TNNT2P45379 298 aaPredicted RBP9.4□□□□□ -0.9
CLSTN2-201ENST00000458420 DCAF8L1A6NGE4 600 aa9.39□□□□□ -0.91
CLSTN2-201ENST00000458420 TSPY4P0CV99 314 aa9.39□□□□□ -0.91
CLSTN2-201ENST00000458420 TSPY10P0CW01 314 aa9.39□□□□□ -0.91
CLSTN2-201ENST00000458420 OS9Q13438 667 aaPredicted RBP9.37□□□□□ -0.91
CLSTN2-201ENST00000458420 HIRIP3Q9BW71 556 aaPredicted RBP9.37□□□□□ -0.91
CLSTN2-201ENST00000458420 NEUROD2Q15784 382 aa9.36□□□□□ -0.91
CLSTN2-201ENST00000458420 NCLP19338 710 aaKnown RBP9.36□□□□□ -0.91
CLSTN2-201ENST00000458420 CSB-PGBD3P0DP91 1061 aa9.35□□□□□ -0.91
CLSTN2-201ENST00000458420 SAFB2Q14151 953 aaKnown RBP eCLIP9.35□□□□□ -0.91
CLSTN2-201ENST00000458420 POGKQ9P215 609 aa9.35□□□□□ -0.91
CLSTN2-201ENST00000458420 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.34□□□□□ -0.91
CLSTN2-201ENST00000458420 ZRSR1Q15695 479 aaKnown RBP9.34□□□□□ -0.91
CLSTN2-201ENST00000458420 WWC1Q8IX03 1113 aa9.33□□□□□ -0.92
CLSTN2-201ENST00000458420 PLCB2Q00722 1185 aa9.33□□□□□ -0.92
CLSTN2-201ENST00000458420 FGD1P98174 961 aa9.32□□□□□ -0.92
CLSTN2-201ENST00000458420 IRX6P78412 446 aaPredicted RBP9.32□□□□□ -0.92
CLSTN2-201ENST00000458420 HNRNPUQ00839 825 aaKnown RBP eCLIP9.31□□□□□ -0.92
CLSTN2-201ENST00000458420 GTF3C3Q9Y5Q9 886 aa9.31□□□□□ -0.92
CLSTN2-201ENST00000458420 PPP1R1BQ9UD71 204 aaPredicted RBP9.31□□□□□ -0.92
CLSTN2-201ENST00000458420 CNKSR2Q8WXI2 1034 aa9.29□□□□□ -0.92
CLSTN2-201ENST00000458420 RRP7BPQ9NSQ0 103 aa9.29□□□□□ -0.92
CLSTN2-201ENST00000458420 DDX10Q13206 875 aaKnown RBP9.27□□□□□ -0.93
CLSTN2-201ENST00000458420 STK26Q9P289 416 aa9.27□□□□□ -0.93
CLSTN2-201ENST00000458420 FKBP8Q14318 412 aa9.27□□□□□ -0.93
CLSTN2-201ENST00000458420 TONSLQ96HA7 1378 aa9.27□□□□□ -0.93
CLSTN2-201ENST00000458420 KCNJ4P48050 445 aa9.26□□□□□ -0.93
CLSTN2-201ENST00000458420 VPS53Q5VIR6 699 aa9.26□□□□□ -0.93
CLSTN2-201ENST00000458420 ERICH6BQ5W0A0 696 aa9.25□□□□□ -0.93
CLSTN2-201ENST00000458420 ERCC6Q03468 1493 aa9.25□□□□□ -0.93
CLSTN2-201ENST00000458420 CCDC136Q96JN2 1154 aa9.25□□□□□ -0.93
CLSTN2-201ENST00000458420 U2SURPO15042 1029 aaKnown RBP9.25□□□□□ -0.93
CLSTN2-201ENST00000458420 CHMP3Q9Y3E7 222 aa9.24□□□□□ -0.93
CLSTN2-201ENST00000458420 NUTM2FA1L443 756 aa9.24□□□□□ -0.93
CLSTN2-201ENST00000458420 RAD21O60216 631 aa9.24□□□□□ -0.93
CLSTN2-201ENST00000458420 CWC22Q9HCG8 908 aaKnown RBP9.23□□□□□ -0.93
CLSTN2-201ENST00000458420 DNTTIP2Q5QJE6 756 aaKnown RBP9.23□□□□□ -0.93
CLSTN2-201ENST00000458420 PTMAP06454 111 aaKnown RBP9.23□□□□□ -0.93
CLSTN2-201ENST00000458420 FBXW7Q969H0 707 aa9.22□□□□□ -0.93
CLSTN2-201ENST00000458420 FRAT2O75474 233 aaPredicted RBP9.21□□□□□ -0.93
CLSTN2-201ENST00000458420 GGT6Q6P531 493 aa9.21□□□□□ -0.93
CLSTN2-201ENST00000458420 GTF2E1P29083 439 aaPredicted RBP9.21□□□□□ -0.93
CLSTN2-201ENST00000458420 SAMD1Q6SPF0 538 aaPredicted RBP9.21□□□□□ -0.94
CLSTN2-201ENST00000458420 FTSJ3Q8IY81 847 aaKnown RBP9.21□□□□□ -0.94
CLSTN2-201ENST00000458420 NUTM2DQ5VT03 806 aaPredicted RBP9.21□□□□□ -0.94
CLSTN2-201ENST00000458420 PLEKHD1A6NEE1 506 aa9.2□□□□□ -0.94
CLSTN2-201ENST00000458420 TRIM44Q96DX7 344 aaPredicted RBP9.19□□□□□ -0.94
CLSTN2-201ENST00000458420 EVA1CP58658 441 aa9.19□□□□□ -0.94
CLSTN2-201ENST00000458420 CASC1Q6TDU7 716 aa9.19□□□□□ -0.94
CLSTN2-201ENST00000458420 MAPK8IP3Q9UPT6 1336 aa9.19□□□□□ -0.94
CLSTN2-201ENST00000458420 APBB1O00213 710 aa9.19□□□□□ -0.94
CLSTN2-201ENST00000458420 SRPK2P78362 688 aaKnown RBP9.19□□□□□ -0.94
CLSTN2-201ENST00000458420 EIF4G2P78344 907 aaKnown RBP eCLIP9.18□□□□□ -0.94
CLSTN2-201ENST00000458420 SYTL4Q96C24 671 aaPredicted RBP9.18□□□□□ -0.94
CLSTN2-201ENST00000458420 TAF7LQ5H9L4 462 aa9.18□□□□□ -0.94
CLSTN2-201ENST00000458420 FRAT1Q92837 279 aaPredicted RBP9.18□□□□□ -0.94
CLSTN2-201ENST00000458420 LTV1Q96GA3 475 aaPredicted RBP9.17□□□□□ -0.94
CLSTN2-201ENST00000458420 MRS2Q9HD23 443 aa9.17□□□□□ -0.94
CLSTN2-201ENST00000458420 CFAP53Q96M91 514 aa9.17□□□□□ -0.94
CLSTN2-201ENST00000458420 CREBRFQ8IUR6 639 aa9.17□□□□□ -0.94
CLSTN2-201ENST00000458420 GNL2Q13823 731 aaKnown RBP9.16□□□□□ -0.94
CLSTN2-201ENST00000458420 CC2D1BQ5T0F9 858 aaKnown RBP9.15□□□□□ -0.94
CLSTN2-201ENST00000458420 RTF1Q92541 710 aaKnown RBP9.14□□□□□ -0.95
CLSTN2-201ENST00000458420 MTUS2Q5JR59 1369 aa9.13□□□□□ -0.95
CLSTN2-201ENST00000458420 SPRYD3Q8NCJ5 442 aa9.13□□□□□ -0.95
CLSTN2-201ENST00000458420 CFAP44Q96MT7 982 aa9.12□□□□□ -0.95
CLSTN2-201ENST00000458420 NOC3LQ8WTT2 800 aaKnown RBP9.12□□□□□ -0.95
CLSTN2-201ENST00000458420 CTDP1Q9Y5B0 961 aaPredicted RBP9.12□□□□□ -0.95
CLSTN2-201ENST00000458420 CSRNP3Q8WYN3 585 aa9.12□□□□□ -0.95
CLSTN2-201ENST00000458420 KNSTRNQ9Y448 316 aa9.12□□□□□ -0.95
CLSTN2-201ENST00000458420 HDGFP51858 240 aaKnown RBP9.11□□□□□ -0.95
CLSTN2-201ENST00000458420 GOLGA6L22H0YM25 854 aa9.11□□□□□ -0.95
CLSTN2-201ENST00000458420 GORABQ5T7V8 394 aa9.11□□□□□ -0.95
CLSTN2-201ENST00000458420 NGEFQ8N5V2 710 aa9.1□□□□□ -0.95
CLSTN2-201ENST00000458420 WDR70Q9NW82 654 aa9.1□□□□□ -0.95
CLSTN2-201ENST00000458420 NUDCQ9Y266 331 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms