RNA–Protein interactions for RNA: ENST00000458220.1

GAS5-229, Transcript of growth arrest specific 5, humanhuman

TSL 2

Gene GAS5, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAS5-229ENST00000458220 SLC39A7Q92504 469 aa14.49□□□□□ -0.09
GAS5-229ENST00000458220 MNX1P50219 401 aaPredicted RBP14.48□□□□□ -0.09
GAS5-229ENST00000458220 ATMINO43313 823 aaPredicted RBP14.47□□□□□ -0.09
GAS5-229ENST00000458220 LCE2DQ5TA82 110 aaPredicted RBP14.47□□□□□ -0.09
GAS5-229ENST00000458220 MS4A3Q96HJ5 214 aa14.43□□□□□ -0.1
GAS5-229ENST00000458220 FAM163AQ96GL9 167 aaPredicted RBP14.38□□□□□ -0.11
GAS5-229ENST00000458220 SCUBE2Q9NQ36 999 aa14.33□□□□□ -0.12
GAS5-229ENST00000458220 SPDYE4A6NLX3 237 aa14.32□□□□□ -0.12
GAS5-229ENST00000458220 ATN1P54259 1190 aaPredicted RBP14.28□□□□□ -0.12
GAS5-229ENST00000458220 POTEFA5A3E0 1075 aa14.24□□□□□ -0.13
GAS5-229ENST00000458220 CCDC61Q9Y6R9 512 aa14.2□□□□□ -0.14
GAS5-229ENST00000458220 TSPYL2Q9H2G4 693 aaPredicted RBP14.17□□□□□ -0.14
GAS5-229ENST00000458220 KIF12Q96FN5 646 aa14.16□□□□□ -0.14
GAS5-229ENST00000458220 BMP2KQ9NSY1 1161 aaPredicted RBP14.15□□□□□ -0.14
GAS5-229ENST00000458220 CDAN1Q8IWY9 1227 aa14.14□□□□□ -0.15
GAS5-229ENST00000458220 CSRNP3Q8WYN3 585 aa14.14□□□□□ -0.15
GAS5-229ENST00000458220 TRPC6Q9Y210 931 aa14.09□□□□□ -0.15
GAS5-229ENST00000458220 TIE1P35590 1138 aa14.08□□□□□ -0.16
GAS5-229ENST00000458220 COLQQ9Y215 455 aaPredicted RBP14.05□□□□□ -0.16
GAS5-229ENST00000458220 MAP3K13O43283 966 aa14.02□□□□□ -0.17
GAS5-229ENST00000458220 SEC24BO95487 1268 aa13.99□□□□□ -0.17
GAS5-229ENST00000458220 TTLL13PA6NNM8 815 aa13.97□□□□□ -0.17
GAS5-229ENST00000458220 ST18O60284 1047 aa13.93□□□□□ -0.18
GAS5-229ENST00000458220 IER5LQ5T953 404 aa13.93□□□□□ -0.18
GAS5-229ENST00000458220 PROM2Q8N271 834 aa13.93□□□□□ -0.18
GAS5-229ENST00000458220 RASEFQ8IZ41 740 aa13.87□□□□□ -0.19
GAS5-229ENST00000458220 SLAIN1Q8ND83 568 aa13.87□□□□□ -0.19
GAS5-229ENST00000458220 TRIM35Q9UPQ4 493 aa13.87□□□□□ -0.19
GAS5-229ENST00000458220 MMRN1Q13201 1228 aa13.85□□□□□ -0.19
GAS5-229ENST00000458220 SGIP1Q9BQI5 828 aa13.84□□□□□ -0.19
GAS5-229ENST00000458220 SPNS2Q8IVW8 549 aa13.82□□□□□ -0.2
GAS5-229ENST00000458220 PLEKHG5O94827 1062 aa13.77□□□□□ -0.21
GAS5-229ENST00000458220 MIER1Q8N108 512 aa13.76□□□□□ -0.21
GAS5-229ENST00000458220 TMEM121BQ9BXQ6 578 aaPredicted RBP13.75□□□□□ -0.21
GAS5-229ENST00000458220 PCDHB13Q9Y5F0 798 aa13.75□□□□□ -0.21
GAS5-229ENST00000458220 PLCG2P16885 1265 aa13.69□□□□□ -0.22
GAS5-229ENST00000458220 IRX5P78411 483 aaPredicted RBP13.68□□□□□ -0.22
GAS5-229ENST00000458220 IFNL1Q8IU54 200 aa13.68□□□□□ -0.22
GAS5-229ENST00000458220 TMEM106CQ9BVX2 250 aa13.66□□□□□ -0.22
GAS5-229ENST00000458220 SNPHO15079 494 aa13.65□□□□□ -0.22
GAS5-229ENST00000458220 NUBP1P53384 320 aa13.6□□□□□ -0.23
GAS5-229ENST00000458220 MARVELD3Q96A59 401 aa13.59□□□□□ -0.23
GAS5-229ENST00000458220 OCEL1Q9H607 264 aa13.58□□□□□ -0.24
GAS5-229ENST00000458220 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.55□□□□□ -0.24
GAS5-229ENST00000458220 PLCD3Q8N3E9 789 aa13.52□□□□□ -0.25
GAS5-229ENST00000458220 ZBTB47Q9UFB7 747 aaPredicted RBP13.51□□□□□ -0.25
GAS5-229ENST00000458220 FAM212AQ96EL1 285 aa13.47□□□□□ -0.25
GAS5-229ENST00000458220 EHMT2Q96KQ7 1210 aa13.47□□□□□ -0.25
GAS5-229ENST00000458220 KRTAP3-3Q9BYR6 98 aa13.44□□□□□ -0.26
GAS5-229ENST00000458220 KRTAP3-2Q9BYR7 98 aa13.44□□□□□ -0.26
GAS5-229ENST00000458220 EMP3P54852 163 aa13.42□□□□□ -0.26
GAS5-229ENST00000458220 POTEB3A0JP26 581 aa13.41□□□□□ -0.26
GAS5-229ENST00000458220 POTEBQ6S5H4 581 aa13.41□□□□□ -0.26
GAS5-229ENST00000458220 HS3ST6Q96QI5 342 aa13.38□□□□□ -0.27
GAS5-229ENST00000458220 PDCD7Q8N8D1 485 aaKnown RBP13.34□□□□□ -0.27
GAS5-229ENST00000458220 FAM205CA6NFA0 338 aa13.33□□□□□ -0.28
GAS5-229ENST00000458220 C3orf67Q6ZVT6 689 aa13.31□□□□□ -0.28
GAS5-229ENST00000458220 PCDHB8Q9UN66 801 aa13.31□□□□□ -0.28
GAS5-229ENST00000458220 PYGBP11216 843 aa13.3□□□□□ -0.28
GAS5-229ENST00000458220 L3MBTL3Q96JM7 780 aaPredicted RBP13.3□□□□□ -0.28
GAS5-229ENST00000458220 DCAF8Q5TAQ9 597 aa13.26□□□□□ -0.29
GAS5-229ENST00000458220 MKRN3Q13064 507 aaKnown RBP13.19□□□□□ -0.3
GAS5-229ENST00000458220 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.16□□□□□ -0.3
GAS5-229ENST00000458220 GOLGA2Q08379 1002 aa13.15□□□□□ -0.3
GAS5-229ENST00000458220 ILDR1Q86SU0 546 aaPredicted RBP13.14□□□□□ -0.31
GAS5-229ENST00000458220 HOXB3P14651 431 aaPredicted RBP13.12□□□□□ -0.31
GAS5-229ENST00000458220 ZNF467Q7Z7K2 595 aaPredicted RBP13.12□□□□□ -0.31
GAS5-229ENST00000458220 HOXB1P14653 301 aaPredicted RBP13.09□□□□□ -0.31
GAS5-229ENST00000458220 RNF166Q96A37 237 aaPredicted RBP13.09□□□□□ -0.31
GAS5-229ENST00000458220 CHRM1P11229 460 aaPredicted RBP13.04□□□□□ -0.32
GAS5-229ENST00000458220 DPY19L2Q6NUT2 758 aa13.04□□□□□ -0.32
GAS5-229ENST00000458220 ERBB3P21860 1342 aa13.03□□□□□ -0.32
GAS5-229ENST00000458220 PSEN1P49768 467 aa13.02□□□□□ -0.33
GAS5-229ENST00000458220 ZNF710Q8N1W2 664 aa13.01□□□□□ -0.33
GAS5-229ENST00000458220 GSE1Q14687 1217 aa13□□□□□ -0.33
GAS5-229ENST00000458220 MYT1LQ9UL68 1186 aa13□□□□□ -0.33
GAS5-229ENST00000458220 BOLA1Q9Y3E2 137 aa12.99□□□□□ -0.33
GAS5-229ENST00000458220 DOK7Q18PE1 504 aa12.97□□□□□ -0.33
GAS5-229ENST00000458220 G3V3G9 751 aa12.93□□□□□ -0.34
GAS5-229ENST00000458220 VARS2Q5ST30 1063 aaKnown RBP12.92□□□□□ -0.34
GAS5-229ENST00000458220 PDAP1Q13442 181 aaKnown RBP12.89□□□□□ -0.35
GAS5-229ENST00000458220 ZNF687Q8N1G0 1237 aa12.89□□□□□ -0.35
GAS5-229ENST00000458220 RIMBP2O15034 1052 aa12.87□□□□□ -0.35
GAS5-229ENST00000458220 PTGER2P43116 358 aa12.86□□□□□ -0.35
GAS5-229ENST00000458220 CABP2Q9NPB3 220 aa12.85□□□□□ -0.35
GAS5-229ENST00000458220 ZSWIM6Q9HCJ5 1215 aa12.84□□□□□ -0.35
GAS5-229ENST00000458220 FBXO3Q9UK99 471 aa12.84□□□□□ -0.35
GAS5-229ENST00000458220 FKBP8Q14318 412 aa12.83□□□□□ -0.36
GAS5-229ENST00000458220 KLHL34Q8N239 644 aa12.8□□□□□ -0.36
GAS5-229ENST00000458220 GPR153Q6NV75 609 aa12.78□□□□□ -0.36
GAS5-229ENST00000458220 TMEM92Q6UXU6 159 aa12.72□□□□□ -0.37
GAS5-229ENST00000458220 ANKRD13DQ6ZTN6 518 aa12.7□□□□□ -0.38
GAS5-229ENST00000458220 VASPP50552 380 aaPredicted RBP12.68□□□□□ -0.38
GAS5-229ENST00000458220 MICALL2Q8IY33 904 aa12.65□□□□□ -0.38
GAS5-229ENST00000458220 EFCAB3Q8N7B9 438 aa12.63□□□□□ -0.39
GAS5-229ENST00000458220 LSM11P83369 360 aaKnown RBP eCLIP12.62□□□□□ -0.394e-11■□□□□ 9.8
GAS5-229ENST00000458220 ARSIQ5FYB1 569 aa12.62□□□□□ -0.39
GAS5-229ENST00000458220 ZNF316A6NFI3 1004 aaPredicted RBP12.6□□□□□ -0.39
GAS5-229ENST00000458220 PLA2G2EQ9NZK7 142 aa12.6□□□□□ -0.39
GAS5-229ENST00000458220 CIZ1Q9ULV3 898 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms