RNA–Protein interactions for RNA: ENST00000458168.1

LINC00709-201, long intergenic non-protein coding RNA 709, humanhuman

TSL 2 BASIC

Gene LINC00709, Length 494 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00709-201ENST00000458168 DCAF8Q5TAQ9 597 aa13.01□□□□□ -0.33
LINC00709-201ENST00000458168 CCDC61Q9Y6R9 512 aa13□□□□□ -0.33
LINC00709-201ENST00000458168 GSE1Q14687 1217 aa12.99□□□□□ -0.33
LINC00709-201ENST00000458168 PHF12Q96QT6 1004 aa12.96□□□□□ -0.33
LINC00709-201ENST00000458168 CIZ1Q9ULV3 898 aaPredicted RBP12.94□□□□□ -0.34
LINC00709-201ENST00000458168 CLCN6P51797 869 aa12.93□□□□□ -0.34
LINC00709-201ENST00000458168 GABBR2O75899 941 aa12.9□□□□□ -0.34
LINC00709-201ENST00000458168 KIF12Q96FN5 646 aa12.88□□□□□ -0.35
LINC00709-201ENST00000458168 PYGBP11216 843 aa12.86□□□□□ -0.35
LINC00709-201ENST00000458168 MAP3K13O43283 966 aa12.83□□□□□ -0.36
LINC00709-201ENST00000458168 TRIM41Q8WV44 630 aa12.83□□□□□ -0.36
LINC00709-201ENST00000458168 GALR2O43603 387 aaPredicted RBP12.81□□□□□ -0.36
LINC00709-201ENST00000458168 CHRM1P11229 460 aaPredicted RBP12.81□□□□□ -0.36
LINC00709-201ENST00000458168 MS4A3Q96HJ5 214 aa12.81□□□□□ -0.36
LINC00709-201ENST00000458168 SGIP1Q9BQI5 828 aa12.8□□□□□ -0.36
LINC00709-201ENST00000458168 PCDHB13Q9Y5F0 798 aa12.8□□□□□ -0.36
LINC00709-201ENST00000458168 PKD2Q13563 968 aa12.75□□□□□ -0.37
LINC00709-201ENST00000458168 IFNL1Q8IU54 200 aa12.74□□□□□ -0.37
LINC00709-201ENST00000458168 ECM2O94769 699 aaPredicted RBP12.71□□□□□ -0.37
LINC00709-201ENST00000458168 ZNF467Q7Z7K2 595 aaPredicted RBP12.71□□□□□ -0.37
LINC00709-201ENST00000458168 PCDHB8Q9UN66 801 aa12.7□□□□□ -0.38
LINC00709-201ENST00000458168 DCBLD2Q96PD2 775 aa12.69□□□□□ -0.38
LINC00709-201ENST00000458168 TRPC6Q9Y210 931 aa12.66□□□□□ -0.38
LINC00709-201ENST00000458168 TIE1P35590 1138 aa12.63□□□□□ -0.39
LINC00709-201ENST00000458168 AMER1Q5JTC6 1135 aaPredicted RBP12.63□□□□□ -0.39
LINC00709-201ENST00000458168 RNF25Q96BH1 459 aaPredicted RBP12.62□□□□□ -0.39
LINC00709-201ENST00000458168 RIOK3O14730 519 aaKnown RBP12.61□□□□□ -0.39
LINC00709-201ENST00000458168 POTEIP0CG38 1075 aa12.61□□□□□ -0.39
LINC00709-201ENST00000458168 ASTLQ6HA08 431 aaPredicted RBP12.6□□□□□ -0.39
LINC00709-201ENST00000458168 BMP2KQ9NSY1 1161 aaPredicted RBP12.6□□□□□ -0.39
LINC00709-201ENST00000458168 RGL2O15211 777 aa12.58□□□□□ -0.4
LINC00709-201ENST00000458168 ATMINO43313 823 aaPredicted RBP12.58□□□□□ -0.4
LINC00709-201ENST00000458168 PDAP1Q13442 181 aaKnown RBP12.58□□□□□ -0.4
LINC00709-201ENST00000458168 TTLL13PA6NNM8 815 aa12.57□□□□□ -0.4
LINC00709-201ENST00000458168 TMEM106CQ9BVX2 250 aa12.57□□□□□ -0.4
LINC00709-201ENST00000458168 PSEN1P49768 467 aa12.56□□□□□ -0.4
LINC00709-201ENST00000458168 RTN4Q9NQC3 1192 aaKnown RBP12.56□□□□□ -0.4
LINC00709-201ENST00000458168 VGFO15240 615 aaPredicted RBP12.54□□□□□ -0.4
LINC00709-201ENST00000458168 ATN1P54259 1190 aaPredicted RBP12.54□□□□□ -0.4
LINC00709-201ENST00000458168 TAOK2Q9UL54 1235 aa12.54□□□□□ -0.4
LINC00709-201ENST00000458168 PELP1Q8IZL8 1130 aaKnown RBP12.5□□□□□ -0.41
LINC00709-201ENST00000458168 TRIM35Q9UPQ4 493 aa12.49□□□□□ -0.41
LINC00709-201ENST00000458168 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.48□□□□□ -0.41
LINC00709-201ENST00000458168 ZFP91Q96JP5 570 aaPredicted RBP12.48□□□□□ -0.41
LINC00709-201ENST00000458168 SLC39A7Q92504 469 aa12.45□□□□□ -0.42
LINC00709-201ENST00000458168 GOLGA2Q08379 1002 aa12.43□□□□□ -0.42
LINC00709-201ENST00000458168 C7P10643 843 aa12.42□□□□□ -0.42
LINC00709-201ENST00000458168 IER5LQ5T953 404 aa12.41□□□□□ -0.42
LINC00709-201ENST00000458168 CABP2Q9NPB3 220 aa12.41□□□□□ -0.42
LINC00709-201ENST00000458168 METRNQ9UJH8 293 aa12.41□□□□□ -0.42
LINC00709-201ENST00000458168 STK25O00506 426 aa12.4□□□□□ -0.42
LINC00709-201ENST00000458168 BCL11BQ9C0K0 894 aaPredicted RBP12.4□□□□□ -0.42
LINC00709-201ENST00000458168 DCAF8L2P0C7V8 631 aa12.39□□□□□ -0.43
LINC00709-201ENST00000458168 MKRN3Q13064 507 aaKnown RBP12.38□□□□□ -0.43
LINC00709-201ENST00000458168 STK24Q9Y6E0 443 aa12.38□□□□□ -0.43
LINC00709-201ENST00000458168 SEC24BO95487 1268 aa12.33□□□□□ -0.44
LINC00709-201ENST00000458168 CHGAP10645 457 aaKnown RBP12.33□□□□□ -0.44
LINC00709-201ENST00000458168 HS6ST3Q8IZP7 471 aa12.33□□□□□ -0.44
LINC00709-201ENST00000458168 EFCAB3Q8N7B9 438 aa12.33□□□□□ -0.44
LINC00709-201ENST00000458168 IRX5P78411 483 aaPredicted RBP12.31□□□□□ -0.44
LINC00709-201ENST00000458168 COLQQ9Y215 455 aaPredicted RBP12.3□□□□□ -0.44
LINC00709-201ENST00000458168 POTEFA5A3E0 1075 aa12.29□□□□□ -0.44
LINC00709-201ENST00000458168 PLCG2P16885 1265 aa12.29□□□□□ -0.44
LINC00709-201ENST00000458168 OCEL1Q9H607 264 aa12.28□□□□□ -0.44
LINC00709-201ENST00000458168 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.28□□□□□ -0.44
LINC00709-201ENST00000458168 SOX12O15370 315 aa12.26□□□□□ -0.45
LINC00709-201ENST00000458168 ILDR1Q86SU0 546 aaPredicted RBP12.24□□□□□ -0.45
LINC00709-201ENST00000458168 LHX8Q68G74 356 aa12.23□□□□□ -0.45
LINC00709-201ENST00000458168 PDCD7Q8N8D1 485 aaKnown RBP12.23□□□□□ -0.45
LINC00709-201ENST00000458168 POTEB2H3BUK9 544 aa12.21□□□□□ -0.45
LINC00709-201ENST00000458168 DNAJC5Q9H3Z4 198 aa12.21□□□□□ -0.45
LINC00709-201ENST00000458168 PHF8Q9UPP1 1060 aa12.2□□□□□ -0.46
LINC00709-201ENST00000458168 NLRP6P59044 892 aa12.19□□□□□ -0.46
LINC00709-201ENST00000458168 MFRPQ9BY79 579 aa12.19□□□□□ -0.46
LINC00709-201ENST00000458168 FBXO22Q8NEZ5 403 aa12.15□□□□□ -0.46
LINC00709-201ENST00000458168 NKX1-1Q15270 411 aaPredicted RBP12.14□□□□□ -0.47
LINC00709-201ENST00000458168 DPY19L2Q6NUT2 758 aa12.14□□□□□ -0.47
LINC00709-201ENST00000458168 MS4A4AQ96JQ5 239 aa12.14□□□□□ -0.47
LINC00709-201ENST00000458168 POTEJP0CG39 1038 aa12.13□□□□□ -0.47
LINC00709-201ENST00000458168 L3MBTL3Q96JM7 780 aaPredicted RBP12.13□□□□□ -0.47
LINC00709-201ENST00000458168 MAMSTRQ6ZN01 415 aa12.11□□□□□ -0.47
LINC00709-201ENST00000458168 BBXQ8WY36 941 aaPredicted RBP12.09□□□□□ -0.47
LINC00709-201ENST00000458168 G3V3G9 751 aa12.08□□□□□ -0.48
LINC00709-201ENST00000458168 SCUBE2Q9NQ36 999 aa12.08□□□□□ -0.48
LINC00709-201ENST00000458168 RYDENQ9NUL5 291 aaKnown RBP12.08□□□□□ -0.48
LINC00709-201ENST00000458168 BOLA1Q9Y3E2 137 aa12.07□□□□□ -0.48
LINC00709-201ENST00000458168 OTUD5Q96G74 571 aa12.05□□□□□ -0.48
LINC00709-201ENST00000458168 C3orf67Q6ZVT6 689 aa12.03□□□□□ -0.48
LINC00709-201ENST00000458168 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.02□□□□□ -0.49
LINC00709-201ENST00000458168 GTPBP6O43824 516 aaPredicted RBP12.01□□□□□ -0.49
LINC00709-201ENST00000458168 MICALL2Q8IY33 904 aa12.01□□□□□ -0.49
LINC00709-201ENST00000458168 TMEM121BQ9BXQ6 578 aaPredicted RBP12.01□□□□□ -0.49
LINC00709-201ENST00000458168 EIF2AK3Q9NZJ5 1116 aaKnown RBP12□□□□□ -0.49
LINC00709-201ENST00000458168 PPP1R37O75864 691 aa11.99□□□□□ -0.49
LINC00709-201ENST00000458168 SLAIN1Q8ND83 568 aa11.94□□□□□ -0.5
LINC00709-201ENST00000458168 SPRYD3Q8NCJ5 442 aa11.93□□□□□ -0.5
LINC00709-201ENST00000458168 PAXIP1Q6ZW49 1069 aaPredicted RBP11.9□□□□□ -0.5
LINC00709-201ENST00000458168 CFAP44Q96MT7 982 aa11.89□□□□□ -0.51
LINC00709-201ENST00000458168 TMEM92Q6UXU6 159 aa11.85□□□□□ -0.51
LINC00709-201ENST00000458168 TMC2Q8TDI7 906 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms