RNA–Protein interactions for RNA: ENST00000457526.1

ZNF440-204, Transcript of zinc finger protein 440, humanhuman

TSL 4

Gene ZNF440, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-204ENST00000457526 PAXIP1Q6ZW49 1069 aaPredicted RBP9.8□□□□□ -0.84
ZNF440-204ENST00000457526 BBXQ8WY36 941 aaPredicted RBP9.79□□□□□ -0.84
ZNF440-204ENST00000457526 NBR1Q14596 966 aa9.77□□□□□ -0.85
ZNF440-204ENST00000457526 CFAP44Q96MT7 982 aa9.77□□□□□ -0.85
ZNF440-204ENST00000457526 CREBZFQ9NS37 354 aa9.74□□□□□ -0.85
ZNF440-204ENST00000457526 PODXL2Q9NZ53 605 aa9.74□□□□□ -0.85
ZNF440-204ENST00000457526 C19orf67A6NJJ6 358 aa9.72□□□□□ -0.85
ZNF440-204ENST00000457526 PKD2Q13563 968 aa9.71□□□□□ -0.86
ZNF440-204ENST00000457526 FARP1Q9Y4F1 1045 aaPredicted RBP9.71□□□□□ -0.86
ZNF440-204ENST00000457526 PROM2Q8N271 834 aa9.7□□□□□ -0.86
ZNF440-204ENST00000457526 VASPP50552 380 aaPredicted RBP9.69□□□□□ -0.86
ZNF440-204ENST00000457526 STAG3Q9UJ98 1225 aa9.67□□□□□ -0.86
ZNF440-204ENST00000457526 TSHZ2Q9NRE2 1034 aa9.66□□□□□ -0.86
ZNF440-204ENST00000457526 IFNLR1Q8IU57 520 aaPredicted RBP9.62□□□□□ -0.87
ZNF440-204ENST00000457526 SPRYD3Q8NCJ5 442 aa9.62□□□□□ -0.87
ZNF440-204ENST00000457526 NPM1P06748 294 aaKnown RBP eCLIP9.61□□□□□ -0.87
ZNF440-204ENST00000457526 CD44P16070 742 aaKnown RBP9.61□□□□□ -0.87
ZNF440-204ENST00000457526 MNX1P50219 401 aaPredicted RBP9.61□□□□□ -0.87
ZNF440-204ENST00000457526 GABBR2O75899 941 aa9.59□□□□□ -0.87
ZNF440-204ENST00000457526 SUPT5HO00267 1087 aaKnown RBP9.52□□□□□ -0.89
ZNF440-204ENST00000457526 ZRANB1Q9UGI0 708 aa9.52□□□□□ -0.89
ZNF440-204ENST00000457526 ECM2O94769 699 aaPredicted RBP9.51□□□□□ -0.89
ZNF440-204ENST00000457526 DNAJC5Q9H3Z4 198 aa9.51□□□□□ -0.89
ZNF440-204ENST00000457526 MIER1Q8N108 512 aa9.5□□□□□ -0.89
ZNF440-204ENST00000457526 NPM2Q86SE8 214 aaKnown RBP9.48□□□□□ -0.89
ZNF440-204ENST00000457526 PHF12Q96QT6 1004 aa9.47□□□□□ -0.89
ZNF440-204ENST00000457526 POTEIP0CG38 1075 aa9.46□□□□□ -0.9
ZNF440-204ENST00000457526 LHX8Q68G74 356 aa9.46□□□□□ -0.9
ZNF440-204ENST00000457526 KLHL34Q8N239 644 aa9.44□□□□□ -0.9
ZNF440-204ENST00000457526 TSPYL2Q9H2G4 693 aaPredicted RBP9.43□□□□□ -0.9
ZNF440-204ENST00000457526 GALR2O43603 387 aaPredicted RBP9.42□□□□□ -0.9
ZNF440-204ENST00000457526 ZNF579Q8NAF0 562 aaKnown RBP9.42□□□□□ -0.9
ZNF440-204ENST00000457526 PLCD3Q8N3E9 789 aa9.41□□□□□ -0.9
ZNF440-204ENST00000457526 TRIM26Q12899 539 aaPredicted RBP9.38□□□□□ -0.91
ZNF440-204ENST00000457526 RASEFQ8IZ41 740 aa9.38□□□□□ -0.91
ZNF440-204ENST00000457526 RGL2O15211 777 aa9.36□□□□□ -0.91
ZNF440-204ENST00000457526 SPOCK2Q92563 424 aa9.35□□□□□ -0.91
ZNF440-204ENST00000457526 UBTFP17480 764 aaKnown RBP9.34□□□□□ -0.91
ZNF440-204ENST00000457526 PAK3O75914 559 aaPredicted RBP9.33□□□□□ -0.92
ZNF440-204ENST00000457526 CHGAP10645 457 aaKnown RBP9.32□□□□□ -0.92
ZNF440-204ENST00000457526 CCDC61Q9Y6R9 512 aa9.32□□□□□ -0.92
ZNF440-204ENST00000457526 MS4A3Q96HJ5 214 aa9.31□□□□□ -0.92
ZNF440-204ENST00000457526 NUBP1P53384 320 aa9.3□□□□□ -0.92
ZNF440-204ENST00000457526 PLEKHG5O94827 1062 aa9.29□□□□□ -0.92
ZNF440-204ENST00000457526 DCBLD2Q96PD2 775 aa9.29□□□□□ -0.92
ZNF440-204ENST00000457526 TRPC6Q9Y210 931 aa9.29□□□□□ -0.92
ZNF440-204ENST00000457526 PELP1Q8IZL8 1130 aaKnown RBP9.28□□□□□ -0.92
ZNF440-204ENST00000457526 CLCN6P51797 869 aa9.26□□□□□ -0.93
ZNF440-204ENST00000457526 MAP3K13O43283 966 aa9.25□□□□□ -0.93
ZNF440-204ENST00000457526 KIF12Q96FN5 646 aa9.25□□□□□ -0.93
ZNF440-204ENST00000457526 HRCP23327 699 aa9.24□□□□□ -0.93
ZNF440-204ENST00000457526 PLSCR2Q9NRY7 297 aa9.23□□□□□ -0.93
ZNF440-204ENST00000457526 BRPF1P55201 1214 aaPredicted RBP9.22□□□□□ -0.93
ZNF440-204ENST00000457526 POTEB2H3BUK9 544 aa9.19□□□□□ -0.94
ZNF440-204ENST00000457526 DCAF8Q5TAQ9 597 aa9.18□□□□□ -0.94
ZNF440-204ENST00000457526 ATMINO43313 823 aaPredicted RBP9.17□□□□□ -0.94
ZNF440-204ENST00000457526 ATN1P54259 1190 aaPredicted RBP9.16□□□□□ -0.94
ZNF440-204ENST00000457526 ZBTB47Q9UFB7 747 aaPredicted RBP9.16□□□□□ -0.94
ZNF440-204ENST00000457526 PYGBP11216 843 aa9.15□□□□□ -0.94
ZNF440-204ENST00000457526 ASTLQ6HA08 431 aaPredicted RBP9.14□□□□□ -0.95
ZNF440-204ENST00000457526 HS6ST3Q8IZP7 471 aa9.14□□□□□ -0.95
ZNF440-204ENST00000457526 IFNL1Q8IU54 200 aa9.13□□□□□ -0.95
ZNF440-204ENST00000457526 BMP2KQ9NSY1 1161 aaPredicted RBP9.13□□□□□ -0.95
ZNF440-204ENST00000457526 PCDHB13Q9Y5F0 798 aa9.13□□□□□ -0.95
ZNF440-204ENST00000457526 NEUROD2Q15784 382 aa9.12□□□□□ -0.95
ZNF440-204ENST00000457526 FAM212AQ96EL1 285 aa9.12□□□□□ -0.95
ZNF440-204ENST00000457526 LMOD2Q6P5Q4 547 aa9.11□□□□□ -0.95
ZNF440-204ENST00000457526 PCDHB8Q9UN66 801 aa9.09□□□□□ -0.95
ZNF440-204ENST00000457526 CCDC9Q9Y3X0 531 aaKnown RBP9.09□□□□□ -0.95
ZNF440-204ENST00000457526 TTBK1Q5TCY1 1321 aaPredicted RBP9.08□□□□□ -0.96
ZNF440-204ENST00000457526 POTEFA5A3E0 1075 aa9.08□□□□□ -0.96
ZNF440-204ENST00000457526 POTEJP0CG39 1038 aa9.08□□□□□ -0.96
ZNF440-204ENST00000457526 MYT1Q01538 1121 aa9.08□□□□□ -0.96
ZNF440-204ENST00000457526 RSPH6AQ9H0K4 717 aa9.08□□□□□ -0.96
ZNF440-204ENST00000457526 TTLL13PA6NNM8 815 aa9.06□□□□□ -0.96
ZNF440-204ENST00000457526 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.06□□□□□ -0.96
ZNF440-204ENST00000457526 P3H3Q8IVL6 736 aa9.06□□□□□ -0.96
ZNF440-204ENST00000457526 ZMYND15Q9H091 742 aa9.06□□□□□ -0.96
ZNF440-204ENST00000457526 METRNQ9UJH8 293 aa9.06□□□□□ -0.96
ZNF440-204ENST00000457526 CIZ1Q9ULV3 898 aaPredicted RBP9.05□□□□□ -0.96
ZNF440-204ENST00000457526 ZBTB7CA1YPR0 619 aa9.04□□□□□ -0.96
ZNF440-204ENST00000457526 OTUD5Q96G74 571 aa9.04□□□□□ -0.96
ZNF440-204ENST00000457526 ARID3AQ99856 593 aa9.04□□□□□ -0.96
ZNF440-204ENST00000457526 TIE1P35590 1138 aa9.03□□□□□ -0.96
ZNF440-204ENST00000457526 COLQQ9Y215 455 aaPredicted RBP9.02□□□□□ -0.97
ZNF440-204ENST00000457526 TRIM35Q9UPQ4 493 aa9.01□□□□□ -0.97
ZNF440-204ENST00000457526 GTPBP6O43824 516 aaPredicted RBP9□□□□□ -0.97
ZNF440-204ENST00000457526 SLC39A7Q92504 469 aa9□□□□□ -0.97
ZNF440-204ENST00000457526 SGIP1Q9BQI5 828 aa9□□□□□ -0.97
ZNF440-204ENST00000457526 TMEM106CQ9BVX2 250 aa9□□□□□ -0.97
ZNF440-204ENST00000457526 C7P10643 843 aa8.99□□□□□ -0.97
ZNF440-204ENST00000457526 NKX1-1Q15270 411 aaPredicted RBP8.98□□□□□ -0.97
ZNF440-204ENST00000457526 GSE1Q14687 1217 aa8.97□□□□□ -0.97
ZNF440-204ENST00000457526 TRIM41Q8WV44 630 aa8.97□□□□□ -0.97
ZNF440-204ENST00000457526 PDIA4P13667 645 aaKnown RBP8.95□□□□□ -0.98
ZNF440-204ENST00000457526 POTEMA6NI47 508 aa8.93□□□□□ -0.98
ZNF440-204ENST00000457526 ZC3H15Q8WU90 426 aaKnown RBP8.93□□□□□ -0.98
ZNF440-204ENST00000457526 SLC24A3Q9HC58 644 aa8.93□□□□□ -0.98
ZNF440-204ENST00000457526 CHRM1P11229 460 aaPredicted RBP8.91□□□□□ -0.98
ZNF440-204ENST00000457526 SEC24BO95487 1268 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms