RNA–Protein interactions for RNA: ENST00000456517.2

HIPK3-203, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HIPK3, Length 7,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-203ENST00000456517 MTUS2Q5JR59 1369 aa19.27■□□□□ 0.68
HIPK3-203ENST00000456517 MRS2Q9HD23 443 aa19.27■□□□□ 0.67
HIPK3-203ENST00000456517 TULP1O00294 542 aaPredicted RBP19.19■□□□□ 0.66
HIPK3-203ENST00000456517 NBR1Q14596 966 aa19.18■□□□□ 0.66
HIPK3-203ENST00000456517 NPHP1O15259 732 aa19.18■□□□□ 0.66
HIPK3-203ENST00000456517 NCLP19338 710 aaKnown RBP19.17■□□□□ 0.66
HIPK3-203ENST00000456517 PPM1GO15355 546 aaPredicted RBP19.16■□□□□ 0.66
HIPK3-203ENST00000456517 LMOD2Q6P5Q4 547 aa19.15■□□□□ 0.66
HIPK3-203ENST00000456517 RGL3Q3MIN7 710 aa19.13■□□□□ 0.65
HIPK3-203ENST00000456517 RRP7BPQ9NSQ0 103 aa19.12■□□□□ 0.65
HIPK3-203ENST00000456517 PLEKHD1A6NEE1 506 aa19.12■□□□□ 0.65
HIPK3-203ENST00000456517 GLIPR1L2Q4G1C9 344 aa19.12■□□□□ 0.65
HIPK3-203ENST00000456517 CFAP53Q96M91 514 aa19.12■□□□□ 0.65
HIPK3-203ENST00000456517 ZRSR1Q15695 479 aaKnown RBP19.1■□□□□ 0.65
HIPK3-203ENST00000456517 EIF4G2P78344 907 aaKnown RBP eCLIP19.1■□□□□ 0.65
HIPK3-203ENST00000456517 HIRIP3Q9BW71 556 aaPredicted RBP19.09■□□□□ 0.65
HIPK3-203ENST00000456517 IRX6P78412 446 aaPredicted RBP19.07■□□□□ 0.64
HIPK3-203ENST00000456517 BECN1Q14457 450 aa19.06■□□□□ 0.64
HIPK3-203ENST00000456517 CASC1Q6TDU7 716 aa19.04■□□□□ 0.64
HIPK3-203ENST00000456517 GOLGA6L22H0YM25 854 aa19.03■□□□□ 0.64
HIPK3-203ENST00000456517 LAS1LQ9Y4W2 734 aaKnown RBP19.02■□□□□ 0.64
HIPK3-203ENST00000456517 CDCA8Q53HL2 280 aa19.02■□□□□ 0.64
HIPK3-203ENST00000456517 KNSTRNQ9Y448 316 aa19.02■□□□□ 0.63
HIPK3-203ENST00000456517 FTSJ3Q8IY81 847 aaKnown RBP19■□□□□ 0.63
HIPK3-203ENST00000456517 TPRNQ4KMQ1 711 aa19■□□□□ 0.63
HIPK3-203ENST00000456517 POGKQ9P215 609 aa18.99■□□□□ 0.63
HIPK3-203ENST00000456517 TRIM44Q96DX7 344 aaPredicted RBP18.99■□□□□ 0.63
HIPK3-203ENST00000456517 TAOK2Q9UL54 1235 aa18.99■□□□□ 0.63
HIPK3-203ENST00000456517 MAPK8IP3Q9UPT6 1336 aa18.96■□□□□ 0.63
HIPK3-203ENST00000456517 RSF1Q96T23 1441 aaPredicted RBP18.95■□□□□ 0.62
HIPK3-203ENST00000456517 NEUROD2Q15784 382 aa18.95■□□□□ 0.62
HIPK3-203ENST00000456517 DDRGK1Q96HY6 314 aa18.95■□□□□ 0.62
HIPK3-203ENST00000456517 TRHP20396 242 aaPredicted RBP18.94■□□□□ 0.62
HIPK3-203ENST00000456517 GOLGA2Q08379 1002 aa18.94■□□□□ 0.62
HIPK3-203ENST00000456517 CFDP1Q9UEE9 299 aaPredicted RBP18.94■□□□□ 0.62
HIPK3-203ENST00000456517 NUDCQ9Y266 331 aa18.92■□□□□ 0.62
HIPK3-203ENST00000456517 PTMAP06454 111 aaKnown RBP18.92■□□□□ 0.62
HIPK3-203ENST00000456517 ANP32EQ9BTT0 268 aa18.91■□□□□ 0.62
HIPK3-203ENST00000456517 SENP3-EIF4A1A0A087X0R7 540 aa18.91■□□□□ 0.62
HIPK3-203ENST00000456517 OS9Q13438 667 aaPredicted RBP18.91■□□□□ 0.62
HIPK3-203ENST00000456517 FGD1P98174 961 aa18.89■□□□□ 0.61
HIPK3-203ENST00000456517 CARD11Q9BXL7 1154 aa18.88■□□□□ 0.61
HIPK3-203ENST00000456517 CLIP1P30622 1438 aa18.88■□□□□ 0.61
HIPK3-203ENST00000456517 TNNT2P45379 298 aaPredicted RBP18.86■□□□□ 0.61
HIPK3-203ENST00000456517 NAP1L2Q9ULW6 460 aaPredicted RBP18.85■□□□□ 0.61
HIPK3-203ENST00000456517 DNTTIP2Q5QJE6 756 aaKnown RBP18.84■□□□□ 0.61
HIPK3-203ENST00000456517 KCNJ4P48050 445 aa18.83■□□□□ 0.61
HIPK3-203ENST00000456517 NCBP3Q53F19 620 aaKnown RBP18.82■□□□□ 0.6
HIPK3-203ENST00000456517 ZCCHC6Q5VYS8 1495 aaKnown RBP18.82■□□□□ 0.6
HIPK3-203ENST00000456517 U2SURPO15042 1029 aaKnown RBP18.82■□□□□ 0.6
HIPK3-203ENST00000456517 MLECQ14165 292 aa18.81■□□□□ 0.6
HIPK3-203ENST00000456517 FRAT1Q92837 279 aaPredicted RBP18.8■□□□□ 0.6
HIPK3-203ENST00000456517 ERCC6Q03468 1493 aa18.79■□□□□ 0.6
HIPK3-203ENST00000456517 SOX12O15370 315 aa18.79■□□□□ 0.6
HIPK3-203ENST00000456517 MIER1Q8N108 512 aa18.79■□□□□ 0.6
HIPK3-203ENST00000456517 CHMP4BQ9H444 224 aaKnown RBP18.78■□□□□ 0.6
HIPK3-203ENST00000456517 PLCB2Q00722 1185 aa18.78■□□□□ 0.6
HIPK3-203ENST00000456517 CLSTN1O94985 981 aa18.78■□□□□ 0.6
HIPK3-203ENST00000456517 HDGFP51858 240 aaKnown RBP18.77■□□□□ 0.6
HIPK3-203ENST00000456517 PNNQ9H307 717 aaKnown RBP18.77■□□□□ 0.6
HIPK3-203ENST00000456517 ISY1Q9ULR0 285 aaKnown RBP18.76■□□□□ 0.59
HIPK3-203ENST00000456517 GOLGA6L6A8MZA4 724 aa18.72■□□□□ 0.59
HIPK3-203ENST00000456517 DCAF1Q9Y4B6 1507 aa18.72■□□□□ 0.59
HIPK3-203ENST00000456517 CC2D1BQ5T0F9 858 aaKnown RBP18.72■□□□□ 0.59
HIPK3-203ENST00000456517 RGS3P49796 1198 aa18.71■□□□□ 0.59
HIPK3-203ENST00000456517 MS4A1P11836 297 aa18.7■□□□□ 0.58
HIPK3-203ENST00000456517 SRPK2P78362 688 aaKnown RBP18.7■□□□□ 0.58
HIPK3-203ENST00000456517 HSP90AB1P08238 724 aaKnown RBP18.69■□□□□ 0.58
HIPK3-203ENST00000456517 KANK1Q14678 1352 aa18.68■□□□□ 0.58
HIPK3-203ENST00000456517 GOLGA6L4A6NEF3 574 aa18.66■□□□□ 0.58
HIPK3-203ENST00000456517 NRDCO43847 1150 aa18.66■□□□□ 0.58
HIPK3-203ENST00000456517 SUPT16HQ9Y5B9 1047 aaKnown RBP18.65■□□□□ 0.58
HIPK3-203ENST00000456517 SAFB2Q14151 953 aaKnown RBP eCLIP18.64■□□□□ 0.58
HIPK3-203ENST00000456517 RTF1Q92541 710 aaKnown RBP18.64■□□□□ 0.57
HIPK3-203ENST00000456517 GOLGA3Q08378 1498 aa18.64■□□□□ 0.57
HIPK3-203ENST00000456517 TMF1P82094 1093 aa18.62■□□□□ 0.57
HIPK3-203ENST00000456517 PAK3O75914 559 aaPredicted RBP18.61■□□□□ 0.57
HIPK3-203ENST00000456517 KIF27Q86VH2 1401 aa18.6■□□□□ 0.57
HIPK3-203ENST00000456517 TMX4Q9H1E5 349 aaPredicted RBP18.6■□□□□ 0.57
HIPK3-203ENST00000456517 RB1CC1Q8TDY2 1594 aa18.6■□□□□ 0.57
HIPK3-203ENST00000456517 DCAF11Q8TEB1 546 aa18.6■□□□□ 0.57
HIPK3-203ENST00000456517 ZNF330Q9Y3S2 320 aaPredicted RBP18.6■□□□□ 0.57
HIPK3-203ENST00000456517 CSB-PGBD3P0DP91 1061 aa18.59■□□□□ 0.57
HIPK3-203ENST00000456517 CCNB3Q8WWL7 1395 aa18.58■□□□□ 0.57
HIPK3-203ENST00000456517 MCCP23508 829 aa18.58■□□□□ 0.56
HIPK3-203ENST00000456517 GNL2Q13823 731 aaKnown RBP18.57■□□□□ 0.56
HIPK3-203ENST00000456517 STK26Q9P289 416 aa18.57■□□□□ 0.56
HIPK3-203ENST00000456517 MORC1Q86VD1 984 aa18.57■□□□□ 0.56
HIPK3-203ENST00000456517 GGT6Q6P531 493 aa18.56■□□□□ 0.56
HIPK3-203ENST00000456517 BAZ1BQ9UIG0 1483 aaKnown RBP18.56■□□□□ 0.56
HIPK3-203ENST00000456517 CCDC9Q9Y3X0 531 aaKnown RBP18.56■□□□□ 0.56
HIPK3-203ENST00000456517 EEA1Q15075 1411 aa18.55■□□□□ 0.56
HIPK3-203ENST00000456517 CEP162Q5TB80 1403 aa18.55■□□□□ 0.56
HIPK3-203ENST00000456517 ERICH6BQ5W0A0 696 aa18.52■□□□□ 0.55
HIPK3-203ENST00000456517 HSCBQ8IWL3 235 aa18.52■□□□□ 0.55
HIPK3-203ENST00000456517 HDGFL2Q7Z4V5 671 aaPredicted RBP18.51■□□□□ 0.55
HIPK3-203ENST00000456517 WRNQ14191 1432 aaPredicted RBP eCLIP18.51■□□□□ 0.55
HIPK3-203ENST00000456517 SIN3AQ96ST3 1273 aa18.5■□□□□ 0.55
HIPK3-203ENST00000456517 EIF4G1Q04637 1599 aaKnown RBP18.5■□□□□ 0.55
HIPK3-203ENST00000456517 AMER1Q5JTC6 1135 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms