RNA–Protein interactions for RNA: ENST00000455840.1

RPL39P39-201, Transcript of ribosomal protein L39 pseudogene 39, humanhuman

BASIC

Gene RPL39P39, Length 151 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P39-201ENST00000455840 PAK3O75914 559 aaPredicted RBP6.34□□□□□ -1.39
RPL39P39-201ENST00000455840 MKRN4PQ13434 485 aaPredicted RBP6.33□□□□□ -1.4
RPL39P39-201ENST00000455840 POTEFA5A3E0 1075 aa6.32□□□□□ -1.4
RPL39P39-201ENST00000455840 TMEM121BQ9BXQ6 578 aaPredicted RBP6.29□□□□□ -1.4
RPL39P39-201ENST00000455840 MS4A3Q96HJ5 214 aa6.28□□□□□ -1.4
RPL39P39-201ENST00000455840 ATN1P54259 1190 aaPredicted RBP6.27□□□□□ -1.41
RPL39P39-201ENST00000455840 CREBZFQ9NS37 354 aa6.26□□□□□ -1.41
RPL39P39-201ENST00000455840 SLAIN1Q8ND83 568 aa6.22□□□□□ -1.41
RPL39P39-201ENST00000455840 FOXD4L1Q9NU39 408 aa6.22□□□□□ -1.41
RPL39P39-201ENST00000455840 KRTAP3-3Q9BYR6 98 aa6.18□□□□□ -1.42
RPL39P39-201ENST00000455840 KRTAP3-2Q9BYR7 98 aa6.18□□□□□ -1.42
RPL39P39-201ENST00000455840 COLQQ9Y215 455 aaPredicted RBP6.18□□□□□ -1.42
RPL39P39-201ENST00000455840 MARVELD3Q96A59 401 aa6.17□□□□□ -1.42
RPL39P39-201ENST00000455840 SEC24BO95487 1268 aa6.16□□□□□ -1.42
RPL39P39-201ENST00000455840 ATXN8OSP0DMR3 200 aa6.16□□□□□ -1.42
RPL39P39-201ENST00000455840 BMP2KQ9NSY1 1161 aaPredicted RBP6.14□□□□□ -1.43
RPL39P39-201ENST00000455840 SNPHO15079 494 aa6.13□□□□□ -1.43
RPL39P39-201ENST00000455840 NPM1P06748 294 aaKnown RBP eCLIP6.13□□□□□ -1.43
RPL39P39-201ENST00000455840 POTEB3A0JP26 581 aa6.07□□□□□ -1.44
RPL39P39-201ENST00000455840 TIE1P35590 1138 aa6.07□□□□□ -1.44
RPL39P39-201ENST00000455840 IER5LQ5T953 404 aa6.07□□□□□ -1.44
RPL39P39-201ENST00000455840 POTEBQ6S5H4 581 aa6.07□□□□□ -1.44
RPL39P39-201ENST00000455840 EMP3P54852 163 aa6.06□□□□□ -1.44
RPL39P39-201ENST00000455840 RNF166Q96A37 237 aaPredicted RBP6.06□□□□□ -1.44
RPL39P39-201ENST00000455840 STAG3Q9UJ98 1225 aa6.06□□□□□ -1.44
RPL39P39-201ENST00000455840 MNX1P50219 401 aaPredicted RBP6.05□□□□□ -1.44
RPL39P39-201ENST00000455840 HS3ST6Q96QI5 342 aa6.05□□□□□ -1.44
RPL39P39-201ENST00000455840 TRPC6Q9Y210 931 aa6.04□□□□□ -1.44
RPL39P39-201ENST00000455840 KIF12Q96FN5 646 aa6.03□□□□□ -1.44
RPL39P39-201ENST00000455840 TTLL13PA6NNM8 815 aa6.01□□□□□ -1.45
RPL39P39-201ENST00000455840 FAM205CA6NFA0 338 aa6□□□□□ -1.45
RPL39P39-201ENST00000455840 CCDC61Q9Y6R9 512 aa6□□□□□ -1.45
RPL39P39-201ENST00000455840 MYT1LQ9UL68 1186 aa5.96□□□□□ -1.46
RPL39P39-201ENST00000455840 TRIM35Q9UPQ4 493 aa5.96□□□□□ -1.46
RPL39P39-201ENST00000455840 TSPYL2Q9H2G4 693 aaPredicted RBP5.95□□□□□ -1.46
RPL39P39-201ENST00000455840 PLCG2P16885 1265 aa5.93□□□□□ -1.46
RPL39P39-201ENST00000455840 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.93□□□□□ -1.46
RPL39P39-201ENST00000455840 MAP3K13O43283 966 aa5.92□□□□□ -1.46
RPL39P39-201ENST00000455840 IRX5P78411 483 aaPredicted RBP5.87□□□□□ -1.47
RPL39P39-201ENST00000455840 PTGER2P43116 358 aa5.84□□□□□ -1.47
RPL39P39-201ENST00000455840 SLC4A1APQ9BWU0 796 aaKnown RBP5.84□□□□□ -1.47
RPL39P39-201ENST00000455840 OCEL1Q9H607 264 aa5.84□□□□□ -1.47
RPL39P39-201ENST00000455840 ZBTB22O15209 634 aa5.83□□□□□ -1.48
RPL39P39-201ENST00000455840 PLA2G2EQ9NZK7 142 aa5.83□□□□□ -1.48
RPL39P39-201ENST00000455840 SGIP1Q9BQI5 828 aa5.82□□□□□ -1.48
RPL39P39-201ENST00000455840 TMEM106CQ9BVX2 250 aa5.77□□□□□ -1.49
RPL39P39-201ENST00000455840 ERBB3P21860 1342 aa5.76□□□□□ -1.49
RPL39P39-201ENST00000455840 HOXB1P14653 301 aaPredicted RBP5.74□□□□□ -1.49
RPL39P39-201ENST00000455840 C3orf67Q6ZVT6 689 aa5.74□□□□□ -1.49
RPL39P39-201ENST00000455840 PCDHB13Q9Y5F0 798 aa5.74□□□□□ -1.49
RPL39P39-201ENST00000455840 IRX2Q9BZI1 471 aaPredicted RBP5.72□□□□□ -1.49
RPL39P39-201ENST00000455840 HOXB3P14651 431 aaPredicted RBP5.7□□□□□ -1.5
RPL39P39-201ENST00000455840 ZNF687Q8N1G0 1237 aa5.7□□□□□ -1.5
RPL39P39-201ENST00000455840 RGS20O76081 388 aa5.69□□□□□ -1.5
RPL39P39-201ENST00000455840 IFNL1Q8IU54 200 aa5.69□□□□□ -1.5
RPL39P39-201ENST00000455840 VARS2Q5ST30 1063 aaKnown RBP5.68□□□□□ -1.5
RPL39P39-201ENST00000455840 RASEFQ8IZ41 740 aa5.68□□□□□ -1.5
RPL39P39-201ENST00000455840 L3MBTL3Q96JM7 780 aaPredicted RBP5.68□□□□□ -1.5
RPL39P39-201ENST00000455840 HCSTQ9UBK5 93 aa5.68□□□□□ -1.5
RPL39P39-201ENST00000455840 ZNF710Q8N1W2 664 aa5.65□□□□□ -1.5
RPL39P39-201ENST00000455840 ANKRD13DQ6ZTN6 518 aa5.64□□□□□ -1.51
RPL39P39-201ENST00000455840 PDCD7Q8N8D1 485 aaKnown RBP5.63□□□□□ -1.51
RPL39P39-201ENST00000455840 DOK7Q18PE1 504 aa5.6□□□□□ -1.51
RPL39P39-201ENST00000455840 SPDYE4A6NLX3 237 aa5.58□□□□□ -1.52
RPL39P39-201ENST00000455840 LSM11P83369 360 aaKnown RBP eCLIP5.56□□□□□ -1.52
RPL39P39-201ENST00000455840 RIMBP2O15034 1052 aa5.55□□□□□ -1.52
RPL39P39-201ENST00000455840 Q6ZNB5 142 aa5.53□□□□□ -1.52
RPL39P39-201ENST00000455840 ZSWIM6Q9HCJ5 1215 aa5.52□□□□□ -1.53
RPL39P39-201ENST00000455840 PLEKHG5O94827 1062 aa5.5□□□□□ -1.53
RPL39P39-201ENST00000455840 LOC100996750A0A140TA64 210 aa5.49□□□□□ -1.53
RPL39P39-201ENST00000455840 IFFO2Q5TF58 517 aa5.49□□□□□ -1.53
RPL39P39-201ENST00000455840 KRTAP4-6Q9BYQ5 205 aa5.49□□□□□ -1.53
RPL39P39-201ENST00000455840 MKRN3Q13064 507 aaKnown RBP5.47□□□□□ -1.53
RPL39P39-201ENST00000455840 GPR153Q6NV75 609 aa5.47□□□□□ -1.53
RPL39P39-201ENST00000455840 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.47□□□□□ -1.53
RPL39P39-201ENST00000455840 ILDR1Q86SU0 546 aaPredicted RBP5.45□□□□□ -1.54
RPL39P39-201ENST00000455840 MIER1Q8N108 512 aa5.44□□□□□ -1.54
RPL39P39-201ENST00000455840 A0A0G2JS52 829 aa5.43□□□□□ -1.54
RPL39P39-201ENST00000455840 PBX2P40425 430 aa5.43□□□□□ -1.54
RPL39P39-201ENST00000455840 NUBP1P53384 320 aa5.43□□□□□ -1.54
RPL39P39-201ENST00000455840 BOLA1Q9Y3E2 137 aa5.43□□□□□ -1.54
RPL39P39-201ENST00000455840 GOLGA2Q08379 1002 aa5.42□□□□□ -1.54
RPL39P39-201ENST00000455840 G3V3G9 751 aa5.41□□□□□ -1.54
RPL39P39-201ENST00000455840 DCAF8Q5TAQ9 597 aa5.41□□□□□ -1.54
RPL39P39-201ENST00000455840 DPY19L2Q6NUT2 758 aa5.41□□□□□ -1.54
RPL39P39-201ENST00000455840 ZNF316A6NFI3 1004 aaPredicted RBP5.4□□□□□ -1.54
RPL39P39-201ENST00000455840 LCE2BO14633 110 aa5.4□□□□□ -1.54
RPL39P39-201ENST00000455840 TRAF7Q6Q0C0 670 aa5.39□□□□□ -1.55
RPL39P39-201ENST00000455840 FAM212AQ96EL1 285 aa5.39□□□□□ -1.55
RPL39P39-201ENST00000455840 PCDHB8Q9UN66 801 aa5.39□□□□□ -1.55
RPL39P39-201ENST00000455840 LAPTM4AQ15012 233 aa5.37□□□□□ -1.55
RPL39P39-201ENST00000455840 POTEEQ6S8J3 1075 aa5.37□□□□□ -1.55
RPL39P39-201ENST00000455840 ARSIQ5FYB1 569 aa5.35□□□□□ -1.55
RPL39P39-201ENST00000455840 ADGRD1Q6QNK2 874 aa5.35□□□□□ -1.55
RPL39P39-201ENST00000455840 PROM2Q8N271 834 aa5.35□□□□□ -1.55
RPL39P39-201ENST00000455840 ZNF775Q96BV0 537 aaPredicted RBP5.34□□□□□ -1.55
RPL39P39-201ENST00000455840 KCTD12Q96CX2 325 aaKnown RBP5.33□□□□□ -1.56
RPL39P39-201ENST00000455840 AXIN2Q9Y2T1 843 aa5.33□□□□□ -1.56
RPL39P39-201ENST00000455840 PYGBP11216 843 aa5.32□□□□□ -1.56
RPL39P39-201ENST00000455840 ZBTB47Q9UFB7 747 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms