RNA–Protein interactions for RNA: ENST00000455595.1

DHFRP3-201, Transcript of dihydrofolate reductase pseudogene 3, humanhuman

BASIC

Gene DHFRP3, Length 559 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP3-201ENST00000455595 SPDYE4A6NLX3 237 aa11.2□□□□□ -0.62
DHFRP3-201ENST00000455595 MS4A3Q96HJ5 214 aa11.2□□□□□ -0.62
DHFRP3-201ENST00000455595 ATMINO43313 823 aaPredicted RBP11.19□□□□□ -0.62
DHFRP3-201ENST00000455595 MAMSTRQ6ZN01 415 aa11.19□□□□□ -0.62
DHFRP3-201ENST00000455595 POTEJP0CG39 1038 aa11.18□□□□□ -0.62
DHFRP3-201ENST00000455595 LCE2DQ5TA82 110 aaPredicted RBP11.12□□□□□ -0.63
DHFRP3-201ENST00000455595 CSRNP3Q8WYN3 585 aa11.1□□□□□ -0.63
DHFRP3-201ENST00000455595 SCUBE2Q9NQ36 999 aa11.09□□□□□ -0.63
DHFRP3-201ENST00000455595 FAM163AQ96GL9 167 aaPredicted RBP11.07□□□□□ -0.64
DHFRP3-201ENST00000455595 ATN1P54259 1190 aaPredicted RBP11.06□□□□□ -0.64
DHFRP3-201ENST00000455595 TSPYL2Q9H2G4 693 aaPredicted RBP11.02□□□□□ -0.65
DHFRP3-201ENST00000455595 CCDC61Q9Y6R9 512 aa11.02□□□□□ -0.65
DHFRP3-201ENST00000455595 POTEFA5A3E0 1075 aa10.98□□□□□ -0.65
DHFRP3-201ENST00000455595 KIF12Q96FN5 646 aa10.98□□□□□ -0.65
DHFRP3-201ENST00000455595 BMP2KQ9NSY1 1161 aaPredicted RBP10.97□□□□□ -0.65
DHFRP3-201ENST00000455595 TIE1P35590 1138 aa10.92□□□□□ -0.66
DHFRP3-201ENST00000455595 TRPC6Q9Y210 931 aa10.91□□□□□ -0.66
DHFRP3-201ENST00000455595 MAP3K13O43283 966 aa10.88□□□□□ -0.67
DHFRP3-201ENST00000455595 CDAN1Q8IWY9 1227 aa10.88□□□□□ -0.67
DHFRP3-201ENST00000455595 PROM2Q8N271 834 aa10.86□□□□□ -0.67
DHFRP3-201ENST00000455595 COLQQ9Y215 455 aaPredicted RBP10.86□□□□□ -0.67
DHFRP3-201ENST00000455595 SEC24BO95487 1268 aa10.85□□□□□ -0.67
DHFRP3-201ENST00000455595 TTLL13PA6NNM8 815 aa10.83□□□□□ -0.68
DHFRP3-201ENST00000455595 IER5LQ5T953 404 aa10.81□□□□□ -0.68
DHFRP3-201ENST00000455595 PLEKHG5O94827 1062 aa10.79□□□□□ -0.68
DHFRP3-201ENST00000455595 RASEFQ8IZ41 740 aa10.79□□□□□ -0.68
DHFRP3-201ENST00000455595 SGIP1Q9BQI5 828 aa10.76□□□□□ -0.69
DHFRP3-201ENST00000455595 TRIM35Q9UPQ4 493 aa10.76□□□□□ -0.69
DHFRP3-201ENST00000455595 NISCHQ9Y2I1 1504 aa10.75□□□□□ -0.69
DHFRP3-201ENST00000455595 ST18O60284 1047 aa10.75□□□□□ -0.69
DHFRP3-201ENST00000455595 SLAIN1Q8ND83 568 aa10.74□□□□□ -0.69
DHFRP3-201ENST00000455595 MIER1Q8N108 512 aa10.72□□□□□ -0.69
DHFRP3-201ENST00000455595 PCDHB13Q9Y5F0 798 aa10.71□□□□□ -0.69
DHFRP3-201ENST00000455595 EHMT2Q96KQ7 1210 aa10.68□□□□□ -0.7
DHFRP3-201ENST00000455595 MMRN1Q13201 1228 aa10.65□□□□□ -0.7
DHFRP3-201ENST00000455595 PLCG2P16885 1265 aa10.64□□□□□ -0.71
DHFRP3-201ENST00000455595 IFNL1Q8IU54 200 aa10.63□□□□□ -0.71
DHFRP3-201ENST00000455595 SPNS2Q8IVW8 549 aa10.63□□□□□ -0.71
DHFRP3-201ENST00000455595 TMEM121BQ9BXQ6 578 aaPredicted RBP10.63□□□□□ -0.71
DHFRP3-201ENST00000455595 TMEM106CQ9BVX2 250 aa10.62□□□□□ -0.71
DHFRP3-201ENST00000455595 IRX5P78411 483 aaPredicted RBP10.6□□□□□ -0.71
DHFRP3-201ENST00000455595 PLCD3Q8N3E9 789 aa10.59□□□□□ -0.71
DHFRP3-201ENST00000455595 NUBP1P53384 320 aa10.58□□□□□ -0.72
DHFRP3-201ENST00000455595 ZBTB47Q9UFB7 747 aaPredicted RBP10.58□□□□□ -0.72
DHFRP3-201ENST00000455595 SNPHO15079 494 aa10.57□□□□□ -0.72
DHFRP3-201ENST00000455595 FAM212AQ96EL1 285 aa10.53□□□□□ -0.72
DHFRP3-201ENST00000455595 OCEL1Q9H607 264 aa10.53□□□□□ -0.72
DHFRP3-201ENST00000455595 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.52□□□□□ -0.73
DHFRP3-201ENST00000455595 MARVELD3Q96A59 401 aa10.5□□□□□ -0.73
DHFRP3-201ENST00000455595 EMP3P54852 163 aa10.41□□□□□ -0.74
DHFRP3-201ENST00000455595 PYGBP11216 843 aa10.38□□□□□ -0.75
DHFRP3-201ENST00000455595 C3orf67Q6ZVT6 689 aa10.37□□□□□ -0.75
DHFRP3-201ENST00000455595 KRTAP3-3Q9BYR6 98 aa10.37□□□□□ -0.75
DHFRP3-201ENST00000455595 KRTAP3-2Q9BYR7 98 aa10.37□□□□□ -0.75
DHFRP3-201ENST00000455595 PDCD7Q8N8D1 485 aaKnown RBP10.36□□□□□ -0.75
DHFRP3-201ENST00000455595 DCAF8Q5TAQ9 597 aa10.35□□□□□ -0.75
DHFRP3-201ENST00000455595 HS3ST6Q96QI5 342 aa10.35□□□□□ -0.75
DHFRP3-201ENST00000455595 PCDHB8Q9UN66 801 aa10.35□□□□□ -0.75
DHFRP3-201ENST00000455595 POTEB3A0JP26 581 aa10.33□□□□□ -0.76
DHFRP3-201ENST00000455595 POTEBQ6S5H4 581 aa10.33□□□□□ -0.76
DHFRP3-201ENST00000455595 L3MBTL3Q96JM7 780 aaPredicted RBP10.33□□□□□ -0.76
DHFRP3-201ENST00000455595 FAM205CA6NFA0 338 aa10.31□□□□□ -0.76
DHFRP3-201ENST00000455595 GOLGA2Q08379 1002 aa10.28□□□□□ -0.76
DHFRP3-201ENST00000455595 MKRN3Q13064 507 aaKnown RBP10.28□□□□□ -0.76
DHFRP3-201ENST00000455595 ZNF467Q7Z7K2 595 aaPredicted RBP10.25□□□□□ -0.77
DHFRP3-201ENST00000455595 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.24□□□□□ -0.77
DHFRP3-201ENST00000455595 ILDR1Q86SU0 546 aaPredicted RBP10.18□□□□□ -0.78
DHFRP3-201ENST00000455595 GSE1Q14687 1217 aa10.17□□□□□ -0.78
DHFRP3-201ENST00000455595 HOXB3P14651 431 aaPredicted RBP10.16□□□□□ -0.78
DHFRP3-201ENST00000455595 PSEN1P49768 467 aa10.16□□□□□ -0.78
DHFRP3-201ENST00000455595 CHRM1P11229 460 aaPredicted RBP10.15□□□□□ -0.78
DHFRP3-201ENST00000455595 HOXB1P14653 301 aaPredicted RBP10.14□□□□□ -0.79
DHFRP3-201ENST00000455595 RNF166Q96A37 237 aaPredicted RBP10.13□□□□□ -0.79
DHFRP3-201ENST00000455595 DPY19L2Q6NUT2 758 aa10.12□□□□□ -0.79
DHFRP3-201ENST00000455595 G3V3G9 751 aa10.11□□□□□ -0.79
DHFRP3-201ENST00000455595 FKBP8Q14318 412 aa10.11□□□□□ -0.79
DHFRP3-201ENST00000455595 ZNF710Q8N1W2 664 aa10.11□□□□□ -0.79
DHFRP3-201ENST00000455595 BOLA1Q9Y3E2 137 aa10.11□□□□□ -0.79
DHFRP3-201ENST00000455595 ERBB3P21860 1342 aa10.1□□□□□ -0.79
DHFRP3-201ENST00000455595 DOK7Q18PE1 504 aa10.09□□□□□ -0.79
DHFRP3-201ENST00000455595 FBXO3Q9UK99 471 aa10.09□□□□□ -0.79
DHFRP3-201ENST00000455595 PDAP1Q13442 181 aaKnown RBP10.07□□□□□ -0.8
DHFRP3-201ENST00000455595 KLHL34Q8N239 644 aa10.05□□□□□ -0.8
DHFRP3-201ENST00000455595 MYT1LQ9UL68 1186 aa10.05□□□□□ -0.8
DHFRP3-201ENST00000455595 CABP2Q9NPB3 220 aa10.03□□□□□ -0.8
DHFRP3-201ENST00000455595 RIMBP2O15034 1052 aa10.02□□□□□ -0.81
DHFRP3-201ENST00000455595 VARS2Q5ST30 1063 aaKnown RBP10.02□□□□□ -0.81
DHFRP3-201ENST00000455595 ZNF687Q8N1G0 1237 aa9.98□□□□□ -0.81
DHFRP3-201ENST00000455595 PTGER2P43116 358 aa9.97□□□□□ -0.81
DHFRP3-201ENST00000455595 VASPP50552 380 aaPredicted RBP9.97□□□□□ -0.81
DHFRP3-201ENST00000455595 ZSWIM6Q9HCJ5 1215 aa9.97□□□□□ -0.81
DHFRP3-201ENST00000455595 GPR153Q6NV75 609 aa9.89□□□□□ -0.83
DHFRP3-201ENST00000455595 TMEM92Q6UXU6 159 aa9.88□□□□□ -0.83
DHFRP3-201ENST00000455595 MICALL2Q8IY33 904 aa9.86□□□□□ -0.83
DHFRP3-201ENST00000455595 EFCAB3Q8N7B9 438 aa9.85□□□□□ -0.83
DHFRP3-201ENST00000455595 CIZ1Q9ULV3 898 aaPredicted RBP9.85□□□□□ -0.83
DHFRP3-201ENST00000455595 ANKRD13DQ6ZTN6 518 aa9.83□□□□□ -0.84
DHFRP3-201ENST00000455595 SPOCK2Q92563 424 aa9.82□□□□□ -0.84
DHFRP3-201ENST00000455595 LSM11P83369 360 aaKnown RBP eCLIP9.79□□□□□ -0.84
DHFRP3-201ENST00000455595 ARSIQ5FYB1 569 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms