RNA–Protein interactions for RNA: ENST00000454642.3

CDH19-202, Transcript of cadherin 19, humanhuman

TSL 5

Gene CDH19, Length 1,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-202ENST00000454642 PRR29P0C7W0 189 aa11.9□□□□□ -0.5
CDH19-202ENST00000454642 PLEKHG5O94827 1062 aa11.89□□□□□ -0.51
CDH19-202ENST00000454642 KDM2AQ9Y2K7 1162 aa11.88□□□□□ -0.51
CDH19-202ENST00000454642 C19orf67A6NJJ6 358 aa11.86□□□□□ -0.51
CDH19-202ENST00000454642 CHADLQ6NUI6 762 aa11.85□□□□□ -0.51
CDH19-202ENST00000454642 CHGAP10645 457 aaKnown RBP11.84□□□□□ -0.51
CDH19-202ENST00000454642 ZBTB47Q9UFB7 747 aaPredicted RBP11.84□□□□□ -0.51
CDH19-202ENST00000454642 PRKCSHP14314 528 aaPredicted RBP11.84□□□□□ -0.51
CDH19-202ENST00000454642 SPRYD3Q8NCJ5 442 aa11.81□□□□□ -0.52
CDH19-202ENST00000454642 TSHZ2Q9NRE2 1034 aa11.78□□□□□ -0.52
CDH19-202ENST00000454642 TAOK2Q9UL54 1235 aa11.77□□□□□ -0.53
CDH19-202ENST00000454642 FARP1Q9Y4F1 1045 aaPredicted RBP11.72□□□□□ -0.53
CDH19-202ENST00000454642 TRIM41Q8WV44 630 aa11.68□□□□□ -0.54
CDH19-202ENST00000454642 RNF25Q96BH1 459 aaPredicted RBP11.68□□□□□ -0.54
CDH19-202ENST00000454642 GSE1Q14687 1217 aa11.65□□□□□ -0.54
CDH19-202ENST00000454642 TPRNQ4KMQ1 711 aa11.65□□□□□ -0.54
CDH19-202ENST00000454642 GABBR2O75899 941 aa11.65□□□□□ -0.55
CDH19-202ENST00000454642 DCAF8Q5TAQ9 597 aa11.65□□□□□ -0.55
CDH19-202ENST00000454642 HS6ST3Q8IZP7 471 aa11.65□□□□□ -0.55
CDH19-202ENST00000454642 CREBZFQ9NS37 354 aa11.65□□□□□ -0.55
CDH19-202ENST00000454642 NUBP1P53384 320 aa11.63□□□□□ -0.55
CDH19-202ENST00000454642 CD44P16070 742 aaKnown RBP11.62□□□□□ -0.55
CDH19-202ENST00000454642 RIOK3O14730 519 aaKnown RBP11.56□□□□□ -0.56
CDH19-202ENST00000454642 NKX1-1Q15270 411 aaPredicted RBP11.54□□□□□ -0.56
CDH19-202ENST00000454642 CLCN6P51797 869 aa11.53□□□□□ -0.56
CDH19-202ENST00000454642 FAM212AQ96EL1 285 aa11.53□□□□□ -0.56
CDH19-202ENST00000454642 STK25O00506 426 aa11.52□□□□□ -0.57
CDH19-202ENST00000454642 MNX1P50219 401 aaPredicted RBP11.5□□□□□ -0.57
CDH19-202ENST00000454642 ZNF579Q8NAF0 562 aaKnown RBP11.49□□□□□ -0.57
CDH19-202ENST00000454642 DNAJC5Q9H3Z4 198 aa11.49□□□□□ -0.57
CDH19-202ENST00000454642 NBR1Q14596 966 aa11.48□□□□□ -0.57
CDH19-202ENST00000454642 RASEFQ8IZ41 740 aa11.48□□□□□ -0.57
CDH19-202ENST00000454642 GTPBP6O43824 516 aaPredicted RBP11.46□□□□□ -0.57
CDH19-202ENST00000454642 VGFO15240 615 aaPredicted RBP11.45□□□□□ -0.58
CDH19-202ENST00000454642 ZRANB1Q9UGI0 708 aa11.45□□□□□ -0.58
CDH19-202ENST00000454642 PYGBP11216 843 aa11.43□□□□□ -0.58
CDH19-202ENST00000454642 POTEIP0CG38 1075 aa11.43□□□□□ -0.58
CDH19-202ENST00000454642 STK24Q9Y6E0 443 aa11.42□□□□□ -0.58
CDH19-202ENST00000454642 BCL11BQ9C0K0 894 aaPredicted RBP11.41□□□□□ -0.58
CDH19-202ENST00000454642 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.4□□□□□ -0.58
CDH19-202ENST00000454642 ZFP91Q96JP5 570 aaPredicted RBP11.4□□□□□ -0.58
CDH19-202ENST00000454642 CHRM1P11229 460 aaPredicted RBP11.39□□□□□ -0.59
CDH19-202ENST00000454642 PAK3O75914 559 aaPredicted RBP11.36□□□□□ -0.59
CDH19-202ENST00000454642 LHX8Q68G74 356 aa11.33□□□□□ -0.6
CDH19-202ENST00000454642 GALR2O43603 387 aaPredicted RBP11.31□□□□□ -0.6
CDH19-202ENST00000454642 DCBLD2Q96PD2 775 aa11.3□□□□□ -0.6
CDH19-202ENST00000454642 SGIP1Q9BQI5 828 aa11.3□□□□□ -0.6
CDH19-202ENST00000454642 PHF12Q96QT6 1004 aa11.3□□□□□ -0.6
CDH19-202ENST00000454642 TSPYL2Q9H2G4 693 aaPredicted RBP11.28□□□□□ -0.6
CDH19-202ENST00000454642 RYDENQ9NUL5 291 aaKnown RBP11.27□□□□□ -0.61
CDH19-202ENST00000454642 CCDC61Q9Y6R9 512 aa11.2□□□□□ -0.62
CDH19-202ENST00000454642 PCDHB8Q9UN66 801 aa11.19□□□□□ -0.62
CDH19-202ENST00000454642 PCDHB13Q9Y5F0 798 aa11.19□□□□□ -0.62
CDH19-202ENST00000454642 ZNF467Q7Z7K2 595 aaPredicted RBP11.18□□□□□ -0.62
CDH19-202ENST00000454642 MS4A3Q96HJ5 214 aa11.17□□□□□ -0.62
CDH19-202ENST00000454642 CADPS2Q86UW7 1296 aa11.15□□□□□ -0.62
CDH19-202ENST00000454642 PDAP1Q13442 181 aaKnown RBP11.14□□□□□ -0.63
CDH19-202ENST00000454642 ASTLQ6HA08 431 aaPredicted RBP11.12□□□□□ -0.63
CDH19-202ENST00000454642 P3H3Q8IVL6 736 aa11.12□□□□□ -0.63
CDH19-202ENST00000454642 WDR70Q9NW82 654 aa11.12□□□□□ -0.63
CDH19-202ENST00000454642 PELP1Q8IZL8 1130 aaKnown RBP11.11□□□□□ -0.63
CDH19-202ENST00000454642 KIF12Q96FN5 646 aa11.11□□□□□ -0.63
CDH19-202ENST00000454642 PSEN1P49768 467 aa11.09□□□□□ -0.63
CDH19-202ENST00000454642 KCNV2Q8TDN2 545 aa11.09□□□□□ -0.63
CDH19-202ENST00000454642 ATMINO43313 823 aaPredicted RBP11.08□□□□□ -0.64
CDH19-202ENST00000454642 MFRPQ9BY79 579 aa11.08□□□□□ -0.64
CDH19-202ENST00000454642 POTEB2H3BUK9 544 aa11.04□□□□□ -0.64
CDH19-202ENST00000454642 MAP3K13O43283 966 aa11.03□□□□□ -0.64
CDH19-202ENST00000454642 IFNL1Q8IU54 200 aa11.01□□□□□ -0.65
CDH19-202ENST00000454642 PPP1R37O75864 691 aa11.01□□□□□ -0.65
CDH19-202ENST00000454642 SLC39A7Q92504 469 aa11.01□□□□□ -0.65
CDH19-202ENST00000454642 C7P10643 843 aa11□□□□□ -0.65
CDH19-202ENST00000454642 METRNQ9UJH8 293 aa11□□□□□ -0.65
CDH19-202ENST00000454642 EFCAB3Q8N7B9 438 aa10.99□□□□□ -0.65
CDH19-202ENST00000454642 OTUD5Q96G74 571 aa10.99□□□□□ -0.65
CDH19-202ENST00000454642 CABP2Q9NPB3 220 aa10.99□□□□□ -0.65
CDH19-202ENST00000454642 ATN1P54259 1190 aaPredicted RBP10.98□□□□□ -0.65
CDH19-202ENST00000454642 TRPC6Q9Y210 931 aa10.98□□□□□ -0.65
CDH19-202ENST00000454642 LMOD2Q6P5Q4 547 aa10.98□□□□□ -0.65
CDH19-202ENST00000454642 BMP2KQ9NSY1 1161 aaPredicted RBP10.98□□□□□ -0.65
CDH19-202ENST00000454642 TIE1P35590 1138 aa10.97□□□□□ -0.65
CDH19-202ENST00000454642 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.96□□□□□ -0.65
CDH19-202ENST00000454642 PHF8Q9UPP1 1060 aa10.96□□□□□ -0.65
CDH19-202ENST00000454642 NLRP6P59044 892 aa10.94□□□□□ -0.66
CDH19-202ENST00000454642 FBXO22Q8NEZ5 403 aa10.94□□□□□ -0.66
CDH19-202ENST00000454642 TULP1O00294 542 aaPredicted RBP10.93□□□□□ -0.66
CDH19-202ENST00000454642 TIMELESSQ9UNS1 1208 aa10.92□□□□□ -0.66
CDH19-202ENST00000454642 GTF3C3Q9Y5Q9 886 aa10.92□□□□□ -0.66
CDH19-202ENST00000454642 SOX12O15370 315 aa10.9□□□□□ -0.66
CDH19-202ENST00000454642 POTEJP0CG39 1038 aa10.9□□□□□ -0.66
CDH19-202ENST00000454642 TTLL13PA6NNM8 815 aa10.89□□□□□ -0.67
CDH19-202ENST00000454642 E2F4Q16254 413 aa10.89□□□□□ -0.67
CDH19-202ENST00000454642 ARHGEF1Q92888 912 aaKnown RBP10.89□□□□□ -0.67
CDH19-202ENST00000454642 POTEFA5A3E0 1075 aa10.87□□□□□ -0.67
CDH19-202ENST00000454642 SEMA3EO15041 775 aa10.86□□□□□ -0.67
CDH19-202ENST00000454642 TMEM132AQ24JP5 1023 aa10.84□□□□□ -0.67
CDH19-202ENST00000454642 NCKAP5LQ9HCH0 1330 aa10.83□□□□□ -0.68
CDH19-202ENST00000454642 MAMSTRQ6ZN01 415 aa10.83□□□□□ -0.68
CDH19-202ENST00000454642 LARP6Q9BRS8 491 aaKnown RBP10.83□□□□□ -0.68
CDH19-202ENST00000454642 IER5LQ5T953 404 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms