RNA–Protein interactions for RNA: ENST00000454043.1

LINC00299-204, long intergenic non-protein coding RNA 299, humanhuman

TSL 4

Gene LINC00299, Length 591 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-204ENST00000454043 NUBP1P53384 320 aa14.21□□□□□ -0.13
LINC00299-204ENST00000454043 TSPYL2Q9H2G4 693 aaPredicted RBP14.21□□□□□ -0.13
LINC00299-204ENST00000454043 RASEFQ8IZ41 740 aa14.2□□□□□ -0.14
LINC00299-204ENST00000454043 ABCC9O60706 1549 aa14.18□□□□□ -0.14
LINC00299-204ENST00000454043 PHF12Q96QT6 1004 aa14.15□□□□□ -0.14
LINC00299-204ENST00000454043 CCDC61Q9Y6R9 512 aa14.14□□□□□ -0.15
LINC00299-204ENST00000454043 KLHL34Q8N239 644 aa14.13□□□□□ -0.15
LINC00299-204ENST00000454043 IFNLR1Q8IU57 520 aaPredicted RBP14.12□□□□□ -0.15
LINC00299-204ENST00000454043 MYO15BQ96JP2 1530 aa14.1□□□□□ -0.15
LINC00299-204ENST00000454043 GALR2O43603 387 aaPredicted RBP14.07□□□□□ -0.16
LINC00299-204ENST00000454043 KIF12Q96FN5 646 aa14.04□□□□□ -0.16
LINC00299-204ENST00000454043 FAM212AQ96EL1 285 aa14.03□□□□□ -0.16
LINC00299-204ENST00000454043 DCAF8Q5TAQ9 597 aa14.02□□□□□ -0.17
LINC00299-204ENST00000454043 NACADO15069 1562 aa14.01□□□□□ -0.17
LINC00299-204ENST00000454043 POTEIP0CG38 1075 aa14.01□□□□□ -0.17
LINC00299-204ENST00000454043 SPOCK2Q92563 424 aa13.98□□□□□ -0.17
LINC00299-204ENST00000454043 MS4A3Q96HJ5 214 aa13.98□□□□□ -0.17
LINC00299-204ENST00000454043 MAP3K13O43283 966 aa13.97□□□□□ -0.17
LINC00299-204ENST00000454043 DCBLD2Q96PD2 775 aa13.96□□□□□ -0.17
LINC00299-204ENST00000454043 GSE1Q14687 1217 aa13.92□□□□□ -0.18
LINC00299-204ENST00000454043 SGIP1Q9BQI5 828 aa13.91□□□□□ -0.18
LINC00299-204ENST00000454043 RB1CC1Q8TDY2 1594 aa13.89□□□□□ -0.19
LINC00299-204ENST00000454043 SHROOM4Q9ULL8 1493 aa13.88□□□□□ -0.19
LINC00299-204ENST00000454043 PYGBP11216 843 aa13.86□□□□□ -0.19
LINC00299-204ENST00000454043 PCDHB13Q9Y5F0 798 aa13.86□□□□□ -0.19
LINC00299-204ENST00000454043 TRPC6Q9Y210 931 aa13.84□□□□□ -0.19
LINC00299-204ENST00000454043 CHRM1P11229 460 aaPredicted RBP13.82□□□□□ -0.2
LINC00299-204ENST00000454043 ASTLQ6HA08 431 aaPredicted RBP13.82□□□□□ -0.2
LINC00299-204ENST00000454043 IFNL1Q8IU54 200 aa13.81□□□□□ -0.2
LINC00299-204ENST00000454043 CIZ1Q9ULV3 898 aaPredicted RBP13.81□□□□□ -0.2
LINC00299-204ENST00000454043 ATMINO43313 823 aaPredicted RBP13.8□□□□□ -0.2
LINC00299-204ENST00000454043 PELP1Q8IZL8 1130 aaKnown RBP13.79□□□□□ -0.2
LINC00299-204ENST00000454043 TIE1P35590 1138 aa13.78□□□□□ -0.2
LINC00299-204ENST00000454043 BMP2KQ9NSY1 1161 aaPredicted RBP13.76□□□□□ -0.21
LINC00299-204ENST00000454043 ATN1P54259 1190 aaPredicted RBP13.74□□□□□ -0.21
LINC00299-204ENST00000454043 PCDHB8Q9UN66 801 aa13.72□□□□□ -0.21
LINC00299-204ENST00000454043 TTLL13PA6NNM8 815 aa13.7□□□□□ -0.22
LINC00299-204ENST00000454043 SCRIBQ14160 1630 aa13.69□□□□□ -0.22
LINC00299-204ENST00000454043 LHX8Q68G74 356 aa13.67□□□□□ -0.22
LINC00299-204ENST00000454043 ZNF467Q7Z7K2 595 aaPredicted RBP13.67□□□□□ -0.22
LINC00299-204ENST00000454043 TRIM41Q8WV44 630 aa13.66□□□□□ -0.22
LINC00299-204ENST00000454043 SLC39A7Q92504 469 aa13.65□□□□□ -0.22
LINC00299-204ENST00000454043 C7P10643 843 aa13.64□□□□□ -0.23
LINC00299-204ENST00000454043 TMEM106CQ9BVX2 250 aa13.64□□□□□ -0.23
LINC00299-204ENST00000454043 METRNQ9UJH8 293 aa13.6□□□□□ -0.23
LINC00299-204ENST00000454043 TRIM35Q9UPQ4 493 aa13.6□□□□□ -0.23
LINC00299-204ENST00000454043 POTEB2H3BUK9 544 aa13.57□□□□□ -0.24
LINC00299-204ENST00000454043 PSEN1P49768 467 aa13.55□□□□□ -0.24
LINC00299-204ENST00000454043 POTEFA5A3E0 1075 aa13.54□□□□□ -0.24
LINC00299-204ENST00000454043 PDAP1Q13442 181 aaKnown RBP13.52□□□□□ -0.25
LINC00299-204ENST00000454043 IER5LQ5T953 404 aa13.52□□□□□ -0.25
LINC00299-204ENST00000454043 PKD2Q13563 968 aa13.51□□□□□ -0.25
LINC00299-204ENST00000454043 RNF25Q96BH1 459 aaPredicted RBP13.48□□□□□ -0.25
LINC00299-204ENST00000454043 COLQQ9Y215 455 aaPredicted RBP13.48□□□□□ -0.25
LINC00299-204ENST00000454043 RIOK3O14730 519 aaKnown RBP13.45□□□□□ -0.26
LINC00299-204ENST00000454043 ECM2O94769 699 aaPredicted RBP13.45□□□□□ -0.26
LINC00299-204ENST00000454043 SEC24BO95487 1268 aa13.45□□□□□ -0.26
LINC00299-204ENST00000454043 POTEJP0CG39 1038 aa13.44□□□□□ -0.26
LINC00299-204ENST00000454043 IRX5P78411 483 aaPredicted RBP13.44□□□□□ -0.26
LINC00299-204ENST00000454043 UNC13AQ9UPW8 1703 aa13.42□□□□□ -0.26
LINC00299-204ENST00000454043 SUPT5HO00267 1087 aaKnown RBP13.41□□□□□ -0.26
LINC00299-204ENST00000454043 OTUD5Q96G74 571 aa13.41□□□□□ -0.26
LINC00299-204ENST00000454043 VGFO15240 615 aaPredicted RBP13.39□□□□□ -0.27
LINC00299-204ENST00000454043 OCEL1Q9H607 264 aa13.39□□□□□ -0.27
LINC00299-204ENST00000454043 MKRN3Q13064 507 aaKnown RBP13.38□□□□□ -0.27
LINC00299-204ENST00000454043 GOLGA2Q08379 1002 aa13.37□□□□□ -0.27
LINC00299-204ENST00000454043 PLCG2P16885 1265 aa13.36□□□□□ -0.27
LINC00299-204ENST00000454043 CABP2Q9NPB3 220 aa13.36□□□□□ -0.27
LINC00299-204ENST00000454043 BICRAQ9NZM4 1560 aa13.36□□□□□ -0.27
LINC00299-204ENST00000454043 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.35□□□□□ -0.27
LINC00299-204ENST00000454043 ZFP91Q96JP5 570 aaPredicted RBP13.35□□□□□ -0.27
LINC00299-204ENST00000454043 RGL2O15211 777 aa13.34□□□□□ -0.27
LINC00299-204ENST00000454043 MAMSTRQ6ZN01 415 aa13.32□□□□□ -0.28
LINC00299-204ENST00000454043 TAOK2Q9UL54 1235 aa13.32□□□□□ -0.28
LINC00299-204ENST00000454043 ILDR1Q86SU0 546 aaPredicted RBP13.31□□□□□ -0.28
LINC00299-204ENST00000454043 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.3□□□□□ -0.28
LINC00299-204ENST00000454043 PDCD7Q8N8D1 485 aaKnown RBP13.29□□□□□ -0.28
LINC00299-204ENST00000454043 EFCAB3Q8N7B9 438 aa13.28□□□□□ -0.28
LINC00299-204ENST00000454043 RSF1Q96T23 1441 aaPredicted RBP13.27□□□□□ -0.29
LINC00299-204ENST00000454043 BAZ1AQ9NRL2 1556 aaPredicted RBP13.27□□□□□ -0.29
LINC00299-204ENST00000454043 SCUBE2Q9NQ36 999 aa13.26□□□□□ -0.29
LINC00299-204ENST00000454043 CECR2Q9BXF3 1484 aa13.25□□□□□ -0.29
LINC00299-204ENST00000454043 BCL11BQ9C0K0 894 aaPredicted RBP13.23□□□□□ -0.29
LINC00299-204ENST00000454043 SOX12O15370 315 aa13.21□□□□□ -0.29
LINC00299-204ENST00000454043 DPY19L2Q6NUT2 758 aa13.2□□□□□ -0.3
LINC00299-204ENST00000454043 STK24Q9Y6E0 443 aa13.2□□□□□ -0.3
LINC00299-204ENST00000454043 STK25O00506 426 aa13.19□□□□□ -0.3
LINC00299-204ENST00000454043 L3MBTL3Q96JM7 780 aaPredicted RBP13.19□□□□□ -0.3
LINC00299-204ENST00000454043 MROH2BQ7Z745 1585 aa13.18□□□□□ -0.3
LINC00299-204ENST00000454043 SMARCA4P51532 1647 aa13.15□□□□□ -0.3
LINC00299-204ENST00000454043 PHF8Q9UPP1 1060 aa13.13□□□□□ -0.31
LINC00299-204ENST00000454043 MS4A4AQ96JQ5 239 aa13.1□□□□□ -0.31
LINC00299-204ENST00000454043 SLAIN1Q8ND83 568 aa13.09□□□□□ -0.31
LINC00299-204ENST00000454043 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.09□□□□□ -0.31
LINC00299-204ENST00000454043 BOLA1Q9Y3E2 137 aa13.08□□□□□ -0.32
LINC00299-204ENST00000454043 NLRP6P59044 892 aa13.07□□□□□ -0.32
LINC00299-204ENST00000454043 FBXO22Q8NEZ5 403 aa13.07□□□□□ -0.32
LINC00299-204ENST00000454043 MFRPQ9BY79 579 aa13.06□□□□□ -0.32
LINC00299-204ENST00000454043 HS6ST3Q8IZP7 471 aa13.05□□□□□ -0.32
LINC00299-204ENST00000454043 TMEM121BQ9BXQ6 578 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms