RNA–Protein interactions for RNA: ENST00000454040.5

PCGEM1-201, PCGEM1, prostate-specific transcript, humanhuman

TSL 1 (best) BASIC

Gene PCGEM1, Length 1,590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGEM1-201ENST00000454040 ASTLQ6HA08 431 aaPredicted RBP12.84□□□□□ -0.35
PCGEM1-201ENST00000454040 SCUBE2Q9NQ36 999 aa12.81□□□□□ -0.36
PCGEM1-201ENST00000454040 STAG3Q9UJ98 1225 aa12.79□□□□□ -0.36
PCGEM1-201ENST00000454040 ATMINO43313 823 aaPredicted RBP12.78□□□□□ -0.36
PCGEM1-201ENST00000454040 CDAN1Q8IWY9 1227 aa12.72□□□□□ -0.37
PCGEM1-201ENST00000454040 NPM1P06748 294 aaKnown RBP eCLIP12.71□□□□□ -0.37
PCGEM1-201ENST00000454040 MS4A3Q96HJ5 214 aa12.69□□□□□ -0.38
PCGEM1-201ENST00000454040 ATN1P54259 1190 aaPredicted RBP12.58□□□□□ -0.4
PCGEM1-201ENST00000454040 MNX1P50219 401 aaPredicted RBP12.56□□□□□ -0.4
PCGEM1-201ENST00000454040 POTEFA5A3E0 1075 aa12.52□□□□□ -0.4
PCGEM1-201ENST00000454040 MMRN1Q13201 1228 aa12.48□□□□□ -0.41
PCGEM1-201ENST00000454040 BMP2KQ9NSY1 1161 aaPredicted RBP12.43□□□□□ -0.42
PCGEM1-201ENST00000454040 SPNS2Q8IVW8 549 aa12.43□□□□□ -0.42
PCGEM1-201ENST00000454040 ST18O60284 1047 aa12.4□□□□□ -0.42
PCGEM1-201ENST00000454040 SEC24BO95487 1268 aa12.39□□□□□ -0.43
PCGEM1-201ENST00000454040 TIE1P35590 1138 aa12.38□□□□□ -0.43
PCGEM1-201ENST00000454040 KIF12Q96FN5 646 aa12.38□□□□□ -0.43
PCGEM1-201ENST00000454040 TSPYL2Q9H2G4 693 aaPredicted RBP12.38□□□□□ -0.43
PCGEM1-201ENST00000454040 CCDC61Q9Y6R9 512 aa12.38□□□□□ -0.43
PCGEM1-201ENST00000454040 COLQQ9Y215 455 aaPredicted RBP12.35□□□□□ -0.43
PCGEM1-201ENST00000454040 SLAIN1Q8ND83 568 aa12.32□□□□□ -0.44
PCGEM1-201ENST00000454040 TRPC6Q9Y210 931 aa12.3□□□□□ -0.44
PCGEM1-201ENST00000454040 SPDYE4A6NLX3 237 aa12.3□□□□□ -0.44
PCGEM1-201ENST00000454040 IER5LQ5T953 404 aa12.28□□□□□ -0.44
PCGEM1-201ENST00000454040 TMEM121BQ9BXQ6 578 aaPredicted RBP12.26□□□□□ -0.45
PCGEM1-201ENST00000454040 TTLL13PA6NNM8 815 aa12.25□□□□□ -0.45
PCGEM1-201ENST00000454040 MAP3K13O43283 966 aa12.23□□□□□ -0.45
PCGEM1-201ENST00000454040 TRIM35Q9UPQ4 493 aa12.17□□□□□ -0.46
PCGEM1-201ENST00000454040 SNPHO15079 494 aa12.15□□□□□ -0.46
PCGEM1-201ENST00000454040 SGIP1Q9BQI5 828 aa12.09□□□□□ -0.47
PCGEM1-201ENST00000454040 PLCG2P16885 1265 aa12.07□□□□□ -0.48
PCGEM1-201ENST00000454040 MARVELD3Q96A59 401 aa12.07□□□□□ -0.48
PCGEM1-201ENST00000454040 RASEFQ8IZ41 740 aa12.01□□□□□ -0.49
PCGEM1-201ENST00000454040 PCDHB13Q9Y5F0 798 aa12□□□□□ -0.49
PCGEM1-201ENST00000454040 EHMT2Q96KQ7 1210 aa11.98□□□□□ -0.49
PCGEM1-201ENST00000454040 PLEKHG5O94827 1062 aa11.97□□□□□ -0.49
PCGEM1-201ENST00000454040 IRX5P78411 483 aaPredicted RBP11.97□□□□□ -0.49
PCGEM1-201ENST00000454040 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.97□□□□□ -0.49
PCGEM1-201ENST00000454040 KRTAP3-3Q9BYR6 98 aa11.96□□□□□ -0.5
PCGEM1-201ENST00000454040 KRTAP3-2Q9BYR7 98 aa11.96□□□□□ -0.5
PCGEM1-201ENST00000454040 EMP3P54852 163 aa11.95□□□□□ -0.5
PCGEM1-201ENST00000454040 SLC24A1O60721 1099 aa11.94□□□□□ -0.5
PCGEM1-201ENST00000454040 TMEM106CQ9BVX2 250 aa11.94□□□□□ -0.5
PCGEM1-201ENST00000454040 OCEL1Q9H607 264 aa11.92□□□□□ -0.5
PCGEM1-201ENST00000454040 HS3ST6Q96QI5 342 aa11.89□□□□□ -0.51
PCGEM1-201ENST00000454040 IFNL1Q8IU54 200 aa11.88□□□□□ -0.51
PCGEM1-201ENST00000454040 PROM2Q8N271 834 aa11.86□□□□□ -0.51
PCGEM1-201ENST00000454040 POTEB3A0JP26 581 aa11.85□□□□□ -0.51
PCGEM1-201ENST00000454040 POTEBQ6S5H4 581 aa11.85□□□□□ -0.51
PCGEM1-201ENST00000454040 MIER1Q8N108 512 aa11.85□□□□□ -0.51
PCGEM1-201ENST00000454040 FAM205CA6NFA0 338 aa11.84□□□□□ -0.51
PCGEM1-201ENST00000454040 C3orf67Q6ZVT6 689 aa11.74□□□□□ -0.53
PCGEM1-201ENST00000454040 RNF166Q96A37 237 aaPredicted RBP11.74□□□□□ -0.53
PCGEM1-201ENST00000454040 CSRNP3Q8WYN3 585 aa11.73□□□□□ -0.53
PCGEM1-201ENST00000454040 NUBP1P53384 320 aa11.7□□□□□ -0.54
PCGEM1-201ENST00000454040 L3MBTL3Q96JM7 780 aaPredicted RBP11.69□□□□□ -0.54
PCGEM1-201ENST00000454040 ZBTB47Q9UFB7 747 aaPredicted RBP11.68□□□□□ -0.54
PCGEM1-201ENST00000454040 FAM212AQ96EL1 285 aa11.67□□□□□ -0.54
PCGEM1-201ENST00000454040 PLCD3Q8N3E9 789 aa11.63□□□□□ -0.55
PCGEM1-201ENST00000454040 PDCD7Q8N8D1 485 aaKnown RBP11.63□□□□□ -0.55
PCGEM1-201ENST00000454040 MYT1LQ9UL68 1186 aa11.61□□□□□ -0.55
PCGEM1-201ENST00000454040 ERBB3P21860 1342 aa11.54□□□□□ -0.56
PCGEM1-201ENST00000454040 HOXB1P14653 301 aaPredicted RBP11.54□□□□□ -0.56
PCGEM1-201ENST00000454040 MKRN3Q13064 507 aaKnown RBP11.52□□□□□ -0.57
PCGEM1-201ENST00000454040 HOXB3P14651 431 aaPredicted RBP11.5□□□□□ -0.57
PCGEM1-201ENST00000454040 GOLGA2Q08379 1002 aa11.5□□□□□ -0.57
PCGEM1-201ENST00000454040 PCDHB8Q9UN66 801 aa11.5□□□□□ -0.57
PCGEM1-201ENST00000454040 PTGER2P43116 358 aa11.5□□□□□ -0.57
PCGEM1-201ENST00000454040 ZNF710Q8N1W2 664 aa11.5□□□□□ -0.57
PCGEM1-201ENST00000454040 PYGBP11216 843 aa11.48□□□□□ -0.57
PCGEM1-201ENST00000454040 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.46□□□□□ -0.57
PCGEM1-201ENST00000454040 DCAF8Q5TAQ9 597 aa11.44□□□□□ -0.58
PCGEM1-201ENST00000454040 DOK7Q18PE1 504 aa11.43□□□□□ -0.58
PCGEM1-201ENST00000454040 VARS2Q5ST30 1063 aaKnown RBP11.41□□□□□ -0.58
PCGEM1-201ENST00000454040 ZNF687Q8N1G0 1237 aa11.39□□□□□ -0.59
PCGEM1-201ENST00000454040 ILDR1Q86SU0 546 aaPredicted RBP11.37□□□□□ -0.59
PCGEM1-201ENST00000454040 G3V3G9 751 aa11.37□□□□□ -0.59
PCGEM1-201ENST00000454040 RIMBP2O15034 1052 aa11.37□□□□□ -0.59
PCGEM1-201ENST00000454040 ZNF467Q7Z7K2 595 aaPredicted RBP11.37□□□□□ -0.59
PCGEM1-201ENST00000454040 BOLA1Q9Y3E2 137 aa11.33□□□□□ -0.6
PCGEM1-201ENST00000454040 DPY19L2Q6NUT2 758 aa11.3□□□□□ -0.6
PCGEM1-201ENST00000454040 ZSWIM6Q9HCJ5 1215 aa11.28□□□□□ -0.6
PCGEM1-201ENST00000454040 PLA2G2EQ9NZK7 142 aa11.28□□□□□ -0.6
PCGEM1-201ENST00000454040 PSEN1P49768 467 aa11.26□□□□□ -0.61
PCGEM1-201ENST00000454040 ANKRD13DQ6ZTN6 518 aa11.24□□□□□ -0.61
PCGEM1-201ENST00000454040 RTN4Q9NQC3 1192 aaKnown RBP11.21□□□□□ -0.61
PCGEM1-201ENST00000454040 CHRM1P11229 460 aaPredicted RBP11.19□□□□□ -0.62
PCGEM1-201ENST00000454040 GSE1Q14687 1217 aa11.18□□□□□ -0.62
PCGEM1-201ENST00000454040 GPR153Q6NV75 609 aa11.17□□□□□ -0.62
PCGEM1-201ENST00000454040 HCSTQ9UBK5 93 aa11.16□□□□□ -0.62
PCGEM1-201ENST00000454040 LSM11P83369 360 aaKnown RBP eCLIP11.15□□□□□ -0.62
PCGEM1-201ENST00000454040 PDAP1Q13442 181 aaKnown RBP11.13□□□□□ -0.63
PCGEM1-201ENST00000454040 CABP2Q9NPB3 220 aa11.11□□□□□ -0.63
PCGEM1-201ENST00000454040 ZNF316A6NFI3 1004 aaPredicted RBP11.05□□□□□ -0.64
PCGEM1-201ENST00000454040 AMER1Q5JTC6 1135 aaPredicted RBP11.03□□□□□ -0.64
PCGEM1-201ENST00000454040 PBX2P40425 430 aa11.03□□□□□ -0.64
PCGEM1-201ENST00000454040 ARSIQ5FYB1 569 aa11.03□□□□□ -0.64
PCGEM1-201ENST00000454040 TMEM92Q6UXU6 159 aa11.02□□□□□ -0.65
PCGEM1-201ENST00000454040 RGS20O76081 388 aa10.98□□□□□ -0.65
PCGEM1-201ENST00000454040 MICALL2Q8IY33 904 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms