RNA–Protein interactions for RNA: ENST00000452825.7

KDM5C-208, Transcript of lysine demethylase 5C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KDM5C, Length 6,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-208ENST00000452825 C14orf37Q86TY3 774 aa17.99■□□□□ 0.47
KDM5C-208ENST00000452825 CDK11BP21127 795 aaKnown RBP17.95■□□□□ 0.46
KDM5C-208ENST00000452825 SENP3-EIF4A1A0A087X0R7 540 aa17.95■□□□□ 0.46
KDM5C-208ENST00000452825 RSF1Q96T23 1441 aaPredicted RBP17.91■□□□□ 0.46
KDM5C-208ENST00000452825 RB1CC1Q8TDY2 1594 aa17.91■□□□□ 0.46
KDM5C-208ENST00000452825 TSPY4P0CV99 314 aa17.91■□□□□ 0.46
KDM5C-208ENST00000452825 TSPY10P0CW01 314 aa17.91■□□□□ 0.46
KDM5C-208ENST00000452825 MYO15BQ96JP2 1530 aa17.9■□□□□ 0.46
KDM5C-208ENST00000452825 TPRNQ4KMQ1 711 aa17.9■□□□□ 0.46
KDM5C-208ENST00000452825 MIER1Q8N108 512 aa17.9■□□□□ 0.46
KDM5C-208ENST00000452825 TRIM44Q96DX7 344 aaPredicted RBP17.88■□□□□ 0.45
KDM5C-208ENST00000452825 RRP7BPQ9NSQ0 103 aa17.88■□□□□ 0.45
KDM5C-208ENST00000452825 MTUS2Q5JR59 1369 aa17.87■□□□□ 0.45
KDM5C-208ENST00000452825 PPP1R15AO75807 674 aaPredicted RBP17.85■□□□□ 0.45
KDM5C-208ENST00000452825 NCLP19338 710 aaKnown RBP17.84■□□□□ 0.45
KDM5C-208ENST00000452825 TULP1O00294 542 aaPredicted RBP17.81■□□□□ 0.44
KDM5C-208ENST00000452825 BECN1Q14457 450 aa17.81■□□□□ 0.44
KDM5C-208ENST00000452825 ANP32EQ9BTT0 268 aa17.81■□□□□ 0.44
KDM5C-208ENST00000452825 KCNH8Q96L42 1107 aa17.81■□□□□ 0.44
KDM5C-208ENST00000452825 EIF4G2P78344 907 aaKnown RBP eCLIP17.8■□□□□ 0.44
KDM5C-208ENST00000452825 CHMP7Q8WUX9 453 aaPredicted RBP17.8■□□□□ 0.44
KDM5C-208ENST00000452825 DDRGK1Q96HY6 314 aa17.8■□□□□ 0.44
KDM5C-208ENST00000452825 NACADO15069 1562 aa17.79■□□□□ 0.44
KDM5C-208ENST00000452825 CLIP1P30622 1438 aa17.79■□□□□ 0.44
KDM5C-208ENST00000452825 RGL3Q3MIN7 710 aa17.79■□□□□ 0.44
KDM5C-208ENST00000452825 PPM1GO15355 546 aaPredicted RBP17.77■□□□□ 0.44
KDM5C-208ENST00000452825 ERICH6BQ5W0A0 696 aa17.76■□□□□ 0.43
KDM5C-208ENST00000452825 HAP1P54257 671 aaPredicted RBP17.75■□□□□ 0.43
KDM5C-208ENST00000452825 TAOK2Q9UL54 1235 aa17.75■□□□□ 0.43
KDM5C-208ENST00000452825 EEA1Q15075 1411 aa17.74■□□□□ 0.43
KDM5C-208ENST00000452825 LAS1LQ9Y4W2 734 aaKnown RBP17.74■□□□□ 0.43
KDM5C-208ENST00000452825 GOLGA6L22H0YM25 854 aa17.72■□□□□ 0.43
KDM5C-208ENST00000452825 GOLGA3Q08378 1498 aa17.72■□□□□ 0.43
KDM5C-208ENST00000452825 PTMAP06454 111 aaKnown RBP17.72■□□□□ 0.43
KDM5C-208ENST00000452825 CEP162Q5TB80 1403 aa17.7■□□□□ 0.42
KDM5C-208ENST00000452825 NAP1L5Q96NT1 182 aaPredicted RBP17.7■□□□□ 0.42
KDM5C-208ENST00000452825 NEUROD2Q15784 382 aa17.69■□□□□ 0.42
KDM5C-208ENST00000452825 FTSJ3Q8IY81 847 aaKnown RBP17.69■□□□□ 0.42
KDM5C-208ENST00000452825 CASC1Q6TDU7 716 aa17.69■□□□□ 0.42
KDM5C-208ENST00000452825 ZRSR1Q15695 479 aaKnown RBP17.69■□□□□ 0.42
KDM5C-208ENST00000452825 ARID4BQ4LE39 1312 aaPredicted RBP17.68■□□□□ 0.42
KDM5C-208ENST00000452825 CFAP53Q96M91 514 aa17.68■□□□□ 0.42
KDM5C-208ENST00000452825 WRNQ14191 1432 aaPredicted RBP eCLIP17.66■□□□□ 0.42
KDM5C-208ENST00000452825 DNTTIP2Q5QJE6 756 aaKnown RBP17.65■□□□□ 0.42
KDM5C-208ENST00000452825 KNSTRNQ9Y448 316 aa17.65■□□□□ 0.42
KDM5C-208ENST00000452825 SUPT16HQ9Y5B9 1047 aaKnown RBP17.64■□□□□ 0.42
KDM5C-208ENST00000452825 BAZ1BQ9UIG0 1483 aaKnown RBP17.63■□□□□ 0.41
KDM5C-208ENST00000452825 LMOD2Q6P5Q4 547 aa17.6■□□□□ 0.41
KDM5C-208ENST00000452825 CARD11Q9BXL7 1154 aa17.6■□□□□ 0.41
KDM5C-208ENST00000452825 MAPK8IP3Q9UPT6 1336 aa17.59■□□□□ 0.41
KDM5C-208ENST00000452825 PLEKHD1A6NEE1 506 aa17.59■□□□□ 0.41
KDM5C-208ENST00000452825 RGS3P49796 1198 aa17.59■□□□□ 0.41
KDM5C-208ENST00000452825 PLCB2Q00722 1185 aa17.59■□□□□ 0.41
KDM5C-208ENST00000452825 FRAT1Q92837 279 aaPredicted RBP17.59■□□□□ 0.41
KDM5C-208ENST00000452825 TNIKQ9UKE5 1360 aa17.58■□□□□ 0.4
KDM5C-208ENST00000452825 RTN4Q9NQC3 1192 aaKnown RBP17.58■□□□□ 0.4
KDM5C-208ENST00000452825 CC2D1BQ5T0F9 858 aaKnown RBP17.57■□□□□ 0.4
KDM5C-208ENST00000452825 NPHP1O15259 732 aa17.56■□□□□ 0.4
KDM5C-208ENST00000452825 BAZ1AQ9NRL2 1556 aaPredicted RBP17.56■□□□□ 0.4
KDM5C-208ENST00000452825 CEP164Q9UPV0 1460 aa17.54■□□□□ 0.4
KDM5C-208ENST00000452825 OS9Q13438 667 aaPredicted RBP17.54■□□□□ 0.4
KDM5C-208ENST00000452825 CDCA8Q53HL2 280 aa17.54■□□□□ 0.4
KDM5C-208ENST00000452825 NAP1L2Q9ULW6 460 aaPredicted RBP17.53■□□□□ 0.4
KDM5C-208ENST00000452825 POGKQ9P215 609 aa17.52■□□□□ 0.4
KDM5C-208ENST00000452825 CECR2Q9BXF3 1484 aa17.52■□□□□ 0.39
KDM5C-208ENST00000452825 HSP90AB1P08238 724 aaKnown RBP17.51■□□□□ 0.39
KDM5C-208ENST00000452825 KIF27Q86VH2 1401 aa17.51■□□□□ 0.39
KDM5C-208ENST00000452825 CFDP1Q9UEE9 299 aaPredicted RBP17.51■□□□□ 0.39
KDM5C-208ENST00000452825 U2SURPO15042 1029 aaKnown RBP17.49■□□□□ 0.39
KDM5C-208ENST00000452825 NUDCQ9Y266 331 aa17.48■□□□□ 0.39
KDM5C-208ENST00000452825 FGD1P98174 961 aa17.48■□□□□ 0.39
KDM5C-208ENST00000452825 AMER1Q5JTC6 1135 aaPredicted RBP17.47■□□□□ 0.39
KDM5C-208ENST00000452825 SIN3AQ96ST3 1273 aa17.46■□□□□ 0.39
KDM5C-208ENST00000452825 KCNJ4P48050 445 aa17.45■□□□□ 0.38
KDM5C-208ENST00000452825 SOX12O15370 315 aa17.44■□□□□ 0.38
KDM5C-208ENST00000452825 SPRYD3Q8NCJ5 442 aa17.43■□□□□ 0.38
KDM5C-208ENST00000452825 PPP4R2Q9NY27 417 aa17.43■□□□□ 0.38
KDM5C-208ENST00000452825 NOP58Q9Y2X3 529 aaKnown RBP17.43■□□□□ 0.38
KDM5C-208ENST00000452825 GOLGA6L6A8MZA4 724 aa17.42■□□□□ 0.38
KDM5C-208ENST00000452825 GOLGA2Q08379 1002 aa17.41■□□□□ 0.38
KDM5C-208ENST00000452825 B4GALNT3Q6L9W6 998 aa17.41■□□□□ 0.38
KDM5C-208ENST00000452825 NCBP3Q53F19 620 aaKnown RBP17.38■□□□□ 0.37
KDM5C-208ENST00000452825 CLSTN1O94985 981 aa17.38■□□□□ 0.37
KDM5C-208ENST00000452825 CHAF1AQ13111 956 aaPredicted RBP17.35■□□□□ 0.37
KDM5C-208ENST00000452825 HSCBQ8IWL3 235 aa17.35■□□□□ 0.37
KDM5C-208ENST00000452825 SAFB2Q14151 953 aaKnown RBP eCLIP17.34■□□□□ 0.37
KDM5C-208ENST00000452825 SOGA1O94964 1423 aa17.34■□□□□ 0.37
KDM5C-208ENST00000452825 GOLGA6L4A6NEF3 574 aa17.33■□□□□ 0.37
KDM5C-208ENST00000452825 MROH2BQ7Z745 1585 aa17.33■□□□□ 0.36
KDM5C-208ENST00000452825 CHMP4BQ9H444 224 aaKnown RBP17.33■□□□□ 0.36
KDM5C-208ENST00000452825 MLECQ14165 292 aa17.32■□□□□ 0.36
KDM5C-208ENST00000452825 DCAF11Q8TEB1 546 aa17.32■□□□□ 0.36
KDM5C-208ENST00000452825 NRDCO43847 1150 aa17.32■□□□□ 0.36
KDM5C-208ENST00000452825 ISY1Q9ULR0 285 aaKnown RBP17.31■□□□□ 0.36
KDM5C-208ENST00000452825 MS4A1P11836 297 aa17.31■□□□□ 0.36
KDM5C-208ENST00000452825 PNNQ9H307 717 aaKnown RBP17.31■□□□□ 0.36
KDM5C-208ENST00000452825 SRPK2P78362 688 aaKnown RBP17.31■□□□□ 0.36
KDM5C-208ENST00000452825 TMF1P82094 1093 aa17.3■□□□□ 0.36
KDM5C-208ENST00000452825 APBB1O00213 710 aa17.3■□□□□ 0.36
KDM5C-208ENST00000452825 DRC7Q8IY82 874 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms