RNA–Protein interactions for RNA: ENST00000452067.1

NUCKS1P1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1 pseudogene 1, humanhuman

BASIC

Gene NUCKS1P1, Length 703 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1P1-201ENST00000452067 CCDC61Q9Y6R9 512 aa16.69■□□□□ 0.26
NUCKS1P1-201ENST00000452067 DCAF8Q5TAQ9 597 aa16.64■□□□□ 0.25
NUCKS1P1-201ENST00000452067 PHF12Q96QT6 1004 aa16.64■□□□□ 0.25
NUCKS1P1-201ENST00000452067 GSE1Q14687 1217 aa16.6■□□□□ 0.25
NUCKS1P1-201ENST00000452067 GABBR2O75899 941 aa16.56■□□□□ 0.24
NUCKS1P1-201ENST00000452067 CIZ1Q9ULV3 898 aaPredicted RBP16.55■□□□□ 0.24
NUCKS1P1-201ENST00000452067 CLCN6P51797 869 aa16.54■□□□□ 0.24
NUCKS1P1-201ENST00000452067 KIF12Q96FN5 646 aa16.53■□□□□ 0.24
NUCKS1P1-201ENST00000452067 PYGBP11216 843 aa16.48■□□□□ 0.23
NUCKS1P1-201ENST00000452067 MAP3K13O43283 966 aa16.46■□□□□ 0.23
NUCKS1P1-201ENST00000452067 GALR2O43603 387 aaPredicted RBP16.45■□□□□ 0.22
NUCKS1P1-201ENST00000452067 MS4A3Q96HJ5 214 aa16.44■□□□□ 0.22
NUCKS1P1-201ENST00000452067 CHRM1P11229 460 aaPredicted RBP16.43■□□□□ 0.22
NUCKS1P1-201ENST00000452067 SGIP1Q9BQI5 828 aa16.4■□□□□ 0.22
NUCKS1P1-201ENST00000452067 TRIM41Q8WV44 630 aa16.39■□□□□ 0.21
NUCKS1P1-201ENST00000452067 PCDHB13Q9Y5F0 798 aa16.38■□□□□ 0.21
NUCKS1P1-201ENST00000452067 PKD2Q13563 968 aa16.36■□□□□ 0.21
NUCKS1P1-201ENST00000452067 IFNL1Q8IU54 200 aa16.34■□□□□ 0.21
NUCKS1P1-201ENST00000452067 PCDHB8Q9UN66 801 aa16.28■□□□□ 0.2
NUCKS1P1-201ENST00000452067 TRPC6Q9Y210 931 aa16.28■□□□□ 0.2
NUCKS1P1-201ENST00000452067 ECM2O94769 699 aaPredicted RBP16.26■□□□□ 0.19
NUCKS1P1-201ENST00000452067 ZNF467Q7Z7K2 595 aaPredicted RBP16.26■□□□□ 0.19
NUCKS1P1-201ENST00000452067 NISCHQ9Y2I1 1504 aa16.25■□□□□ 0.19
NUCKS1P1-201ENST00000452067 POTEIP0CG38 1075 aa16.24■□□□□ 0.19
NUCKS1P1-201ENST00000452067 DCBLD2Q96PD2 775 aa16.24■□□□□ 0.19
NUCKS1P1-201ENST00000452067 RNF25Q96BH1 459 aaPredicted RBP16.22■□□□□ 0.19
NUCKS1P1-201ENST00000452067 TIE1P35590 1138 aa16.19■□□□□ 0.18
NUCKS1P1-201ENST00000452067 BMP2KQ9NSY1 1161 aaPredicted RBP16.19■□□□□ 0.18
NUCKS1P1-201ENST00000452067 ASTLQ6HA08 431 aaPredicted RBP16.17■□□□□ 0.18
NUCKS1P1-201ENST00000452067 RIOK3O14730 519 aaKnown RBP16.15■□□□□ 0.18
NUCKS1P1-201ENST00000452067 ATMINO43313 823 aaPredicted RBP16.15■□□□□ 0.18
NUCKS1P1-201ENST00000452067 TTLL13PA6NNM8 815 aa16.13■□□□□ 0.17
NUCKS1P1-201ENST00000452067 RGL2O15211 777 aa16.13■□□□□ 0.17
NUCKS1P1-201ENST00000452067 AMER1Q5JTC6 1135 aaPredicted RBP16.12■□□□□ 0.17
NUCKS1P1-201ENST00000452067 TMEM106CQ9BVX2 250 aa16.11■□□□□ 0.17
NUCKS1P1-201ENST00000452067 PSEN1P49768 467 aa16.1■□□□□ 0.17
NUCKS1P1-201ENST00000452067 PDAP1Q13442 181 aaKnown RBP16.1■□□□□ 0.17
NUCKS1P1-201ENST00000452067 ATN1P54259 1190 aaPredicted RBP16.09■□□□□ 0.17
NUCKS1P1-201ENST00000452067 RTN4Q9NQC3 1192 aaKnown RBP16.09■□□□□ 0.17
NUCKS1P1-201ENST00000452067 PELP1Q8IZL8 1130 aaKnown RBP16.08■□□□□ 0.16
NUCKS1P1-201ENST00000452067 VGFO15240 615 aaPredicted RBP16.05■□□□□ 0.16
NUCKS1P1-201ENST00000452067 TRIM35Q9UPQ4 493 aa16.01■□□□□ 0.15
NUCKS1P1-201ENST00000452067 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.99■□□□□ 0.15
NUCKS1P1-201ENST00000452067 ZFP91Q96JP5 570 aaPredicted RBP15.99■□□□□ 0.15
NUCKS1P1-201ENST00000452067 TAOK2Q9UL54 1235 aa15.98■□□□□ 0.15
NUCKS1P1-201ENST00000452067 SLC39A7Q92504 469 aa15.95■□□□□ 0.14
NUCKS1P1-201ENST00000452067 C7P10643 843 aa15.92■□□□□ 0.14
NUCKS1P1-201ENST00000452067 METRNQ9UJH8 293 aa15.91■□□□□ 0.14
NUCKS1P1-201ENST00000452067 IER5LQ5T953 404 aa15.9■□□□□ 0.14
NUCKS1P1-201ENST00000452067 CABP2Q9NPB3 220 aa15.89■□□□□ 0.13
NUCKS1P1-201ENST00000452067 BCL11BQ9C0K0 894 aaPredicted RBP15.88■□□□□ 0.13
NUCKS1P1-201ENST00000452067 STK25O00506 426 aa15.86■□□□□ 0.13
NUCKS1P1-201ENST00000452067 GOLGA2Q08379 1002 aa15.85■□□□□ 0.13
NUCKS1P1-201ENST00000452067 STK24Q9Y6E0 443 aa15.83■□□□□ 0.12
NUCKS1P1-201ENST00000452067 POTEFA5A3E0 1075 aa15.82■□□□□ 0.12
NUCKS1P1-201ENST00000452067 MKRN3Q13064 507 aaKnown RBP15.82■□□□□ 0.12
NUCKS1P1-201ENST00000452067 IRX5P78411 483 aaPredicted RBP15.81■□□□□ 0.12
NUCKS1P1-201ENST00000452067 COLQQ9Y215 455 aaPredicted RBP15.81■□□□□ 0.12
NUCKS1P1-201ENST00000452067 HS6ST3Q8IZP7 471 aa15.8■□□□□ 0.12
NUCKS1P1-201ENST00000452067 EFCAB3Q8N7B9 438 aa15.8■□□□□ 0.12
NUCKS1P1-201ENST00000452067 DCAF8L2P0C7V8 631 aa15.77■□□□□ 0.12
NUCKS1P1-201ENST00000452067 CHGAP10645 457 aaKnown RBP15.77■□□□□ 0.12
NUCKS1P1-201ENST00000452067 SEC24BO95487 1268 aa15.76■□□□□ 0.11
NUCKS1P1-201ENST00000452067 ILDR1Q86SU0 546 aaPredicted RBP15.74■□□□□ 0.11
NUCKS1P1-201ENST00000452067 POTEB2H3BUK9 544 aa15.73■□□□□ 0.11
NUCKS1P1-201ENST00000452067 PLCG2P16885 1265 aa15.73■□□□□ 0.11
NUCKS1P1-201ENST00000452067 OCEL1Q9H607 264 aa15.73■□□□□ 0.11
NUCKS1P1-201ENST00000452067 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.72■□□□□ 0.11
NUCKS1P1-201ENST00000452067 PDCD7Q8N8D1 485 aaKnown RBP15.71■□□□□ 0.11
NUCKS1P1-201ENST00000452067 SOX12O15370 315 aa15.7■□□□□ 0.1
NUCKS1P1-201ENST00000452067 LHX8Q68G74 356 aa15.69■□□□□ 0.1
NUCKS1P1-201ENST00000452067 DNAJC5Q9H3Z4 198 aa15.67■□□□□ 0.1
NUCKS1P1-201ENST00000452067 PHF8Q9UPP1 1060 aa15.65■□□□□ 0.1
NUCKS1P1-201ENST00000452067 POTEJP0CG39 1038 aa15.64■□□□□ 0.09
NUCKS1P1-201ENST00000452067 MFRPQ9BY79 579 aa15.64■□□□□ 0.09
NUCKS1P1-201ENST00000452067 FBXO22Q8NEZ5 403 aa15.61■□□□□ 0.09
NUCKS1P1-201ENST00000452067 MS4A4AQ96JQ5 239 aa15.6■□□□□ 0.09
NUCKS1P1-201ENST00000452067 NLRP6P59044 892 aa15.59■□□□□ 0.09
NUCKS1P1-201ENST00000452067 NKX1-1Q15270 411 aaPredicted RBP15.59■□□□□ 0.09
NUCKS1P1-201ENST00000452067 DPY19L2Q6NUT2 758 aa15.59■□□□□ 0.09
NUCKS1P1-201ENST00000452067 L3MBTL3Q96JM7 780 aaPredicted RBP15.51■□□□□ 0.07
NUCKS1P1-201ENST00000452067 OTUD5Q96G74 571 aa15.5■□□□□ 0.07
NUCKS1P1-201ENST00000452067 MAMSTRQ6ZN01 415 aa15.49■□□□□ 0.07
NUCKS1P1-201ENST00000452067 BOLA1Q9Y3E2 137 aa15.47■□□□□ 0.07
NUCKS1P1-201ENST00000452067 BBXQ8WY36 941 aaPredicted RBP15.46■□□□□ 0.07
NUCKS1P1-201ENST00000452067 SCUBE2Q9NQ36 999 aa15.45■□□□□ 0.06
NUCKS1P1-201ENST00000452067 TMEM121BQ9BXQ6 578 aaPredicted RBP15.43■□□□□ 0.06
NUCKS1P1-201ENST00000452067 GTPBP6O43824 516 aaPredicted RBP15.41■□□□□ 0.06
NUCKS1P1-201ENST00000452067 PPP1R37O75864 691 aa15.41■□□□□ 0.06
NUCKS1P1-201ENST00000452067 MICALL2Q8IY33 904 aa15.41■□□□□ 0.06
NUCKS1P1-201ENST00000452067 RYDENQ9NUL5 291 aaKnown RBP15.41■□□□□ 0.06
NUCKS1P1-201ENST00000452067 G3V3G9 751 aa15.39■□□□□ 0.05
NUCKS1P1-201ENST00000452067 C3orf67Q6ZVT6 689 aa15.37■□□□□ 0.05
NUCKS1P1-201ENST00000452067 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.35■□□□□ 0.05
NUCKS1P1-201ENST00000452067 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.31■□□□□ 0.04
NUCKS1P1-201ENST00000452067 SLAIN1Q8ND83 568 aa15.29■□□□□ 0.04
NUCKS1P1-201ENST00000452067 TMEM92Q6UXU6 159 aa15.24■□□□□ 0.03
NUCKS1P1-201ENST00000452067 SPRYD3Q8NCJ5 442 aa15.24■□□□□ 0.03
NUCKS1P1-201ENST00000452067 PAXIP1Q6ZW49 1069 aaPredicted RBP15.21■□□□□ 0.03
NUCKS1P1-201ENST00000452067 CFAP44Q96MT7 982 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms