RNA–Protein interactions for RNA: ENST00000451349.1

SSXP4-201, Transcript of SSX family pseudogene 4, humanhuman

BASIC

Gene SSXP4, Length 245 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP4-201ENST00000451349 NPM1P06748 294 aaKnown RBP eCLIP8.28□□□□□ -1.08
SSXP4-201ENST00000451349 PHF12Q96QT6 1004 aa8.28□□□□□ -1.08
SSXP4-201ENST00000451349 PELP1Q8IZL8 1130 aaKnown RBP8.27□□□□□ -1.09
SSXP4-201ENST00000451349 FAM163AQ96GL9 167 aaPredicted RBP8.24□□□□□ -1.09
SSXP4-201ENST00000451349 ATMINO43313 823 aaPredicted RBP8.23□□□□□ -1.09
SSXP4-201ENST00000451349 LCE2DQ5TA82 110 aaPredicted RBP8.23□□□□□ -1.09
SSXP4-201ENST00000451349 POTEJP0CG39 1038 aa8.2□□□□□ -1.1
SSXP4-201ENST00000451349 MS4A3Q96HJ5 214 aa8.18□□□□□ -1.1
SSXP4-201ENST00000451349 CDAN1Q8IWY9 1227 aa8.14□□□□□ -1.11
SSXP4-201ENST00000451349 MNX1P50219 401 aaPredicted RBP8.1□□□□□ -1.11
SSXP4-201ENST00000451349 ATN1P54259 1190 aaPredicted RBP8.08□□□□□ -1.12
SSXP4-201ENST00000451349 TIE1P35590 1138 aa8.03□□□□□ -1.12
SSXP4-201ENST00000451349 SPDYE4A6NLX3 237 aa8.02□□□□□ -1.13
SSXP4-201ENST00000451349 BMP2KQ9NSY1 1161 aaPredicted RBP8.02□□□□□ -1.13
SSXP4-201ENST00000451349 POTEFA5A3E0 1075 aa8.01□□□□□ -1.13
SSXP4-201ENST00000451349 SEC24BO95487 1268 aa8.01□□□□□ -1.13
SSXP4-201ENST00000451349 CCDC61Q9Y6R9 512 aa8.01□□□□□ -1.13
SSXP4-201ENST00000451349 MMRN1Q13201 1228 aa7.99□□□□□ -1.13
SSXP4-201ENST00000451349 IER5LQ5T953 404 aa7.99□□□□□ -1.13
SSXP4-201ENST00000451349 KIF12Q96FN5 646 aa7.99□□□□□ -1.13
SSXP4-201ENST00000451349 TSPYL2Q9H2G4 693 aaPredicted RBP7.99□□□□□ -1.13
SSXP4-201ENST00000451349 TMEM121BQ9BXQ6 578 aaPredicted RBP7.96□□□□□ -1.14
SSXP4-201ENST00000451349 ST18O60284 1047 aa7.95□□□□□ -1.14
SSXP4-201ENST00000451349 SPNS2Q8IVW8 549 aa7.95□□□□□ -1.14
SSXP4-201ENST00000451349 SLAIN1Q8ND83 568 aa7.94□□□□□ -1.14
SSXP4-201ENST00000451349 COLQQ9Y215 455 aaPredicted RBP7.92□□□□□ -1.14
SSXP4-201ENST00000451349 TTLL13PA6NNM8 815 aa7.91□□□□□ -1.14
SSXP4-201ENST00000451349 SNPHO15079 494 aa7.9□□□□□ -1.14
SSXP4-201ENST00000451349 MAP3K13O43283 966 aa7.89□□□□□ -1.15
SSXP4-201ENST00000451349 PLEKHG5O94827 1062 aa7.89□□□□□ -1.15
SSXP4-201ENST00000451349 SGIP1Q9BQI5 828 aa7.89□□□□□ -1.15
SSXP4-201ENST00000451349 TRPC6Q9Y210 931 aa7.88□□□□□ -1.15
SSXP4-201ENST00000451349 TRIM35Q9UPQ4 493 aa7.87□□□□□ -1.15
SSXP4-201ENST00000451349 PLCG2P16885 1265 aa7.84□□□□□ -1.15
SSXP4-201ENST00000451349 PCDHB13Q9Y5F0 798 aa7.79□□□□□ -1.16
SSXP4-201ENST00000451349 RASEFQ8IZ41 740 aa7.76□□□□□ -1.17
SSXP4-201ENST00000451349 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.76□□□□□ -1.17
SSXP4-201ENST00000451349 PROM2Q8N271 834 aa7.75□□□□□ -1.17
SSXP4-201ENST00000451349 IRX5P78411 483 aaPredicted RBP7.74□□□□□ -1.17
SSXP4-201ENST00000451349 TMEM106CQ9BVX2 250 aa7.74□□□□□ -1.17
SSXP4-201ENST00000451349 MARVELD3Q96A59 401 aa7.73□□□□□ -1.17
SSXP4-201ENST00000451349 OCEL1Q9H607 264 aa7.73□□□□□ -1.17
SSXP4-201ENST00000451349 EMP3P54852 163 aa7.72□□□□□ -1.17
SSXP4-201ENST00000451349 MIER1Q8N108 512 aa7.71□□□□□ -1.18
SSXP4-201ENST00000451349 ZBTB47Q9UFB7 747 aaPredicted RBP7.7□□□□□ -1.18
SSXP4-201ENST00000451349 IFNL1Q8IU54 200 aa7.69□□□□□ -1.18
SSXP4-201ENST00000451349 HS3ST6Q96QI5 342 aa7.66□□□□□ -1.18
SSXP4-201ENST00000451349 KRTAP3-3Q9BYR6 98 aa7.66□□□□□ -1.18
SSXP4-201ENST00000451349 KRTAP3-2Q9BYR7 98 aa7.66□□□□□ -1.18
SSXP4-201ENST00000451349 C3orf67Q6ZVT6 689 aa7.64□□□□□ -1.19
SSXP4-201ENST00000451349 FAM212AQ96EL1 285 aa7.64□□□□□ -1.19
SSXP4-201ENST00000451349 FAM205CA6NFA0 338 aa7.61□□□□□ -1.19
SSXP4-201ENST00000451349 PLCD3Q8N3E9 789 aa7.61□□□□□ -1.19
SSXP4-201ENST00000451349 L3MBTL3Q96JM7 780 aaPredicted RBP7.61□□□□□ -1.19
SSXP4-201ENST00000451349 NUBP1P53384 320 aa7.58□□□□□ -1.2
SSXP4-201ENST00000451349 RNF166Q96A37 237 aaPredicted RBP7.57□□□□□ -1.2
SSXP4-201ENST00000451349 POTEB3A0JP26 581 aa7.55□□□□□ -1.2
SSXP4-201ENST00000451349 POTEBQ6S5H4 581 aa7.55□□□□□ -1.2
SSXP4-201ENST00000451349 FKBP8Q14318 412 aa7.53□□□□□ -1.2
SSXP4-201ENST00000451349 PDCD7Q8N8D1 485 aaKnown RBP7.52□□□□□ -1.21
SSXP4-201ENST00000451349 GOLGA2Q08379 1002 aa7.51□□□□□ -1.21
SSXP4-201ENST00000451349 MKRN3Q13064 507 aaKnown RBP7.51□□□□□ -1.21
SSXP4-201ENST00000451349 PTGER2P43116 358 aa7.5□□□□□ -1.21
SSXP4-201ENST00000451349 MYT1LQ9UL68 1186 aa7.48□□□□□ -1.21
SSXP4-201ENST00000451349 HOXB1P14653 301 aaPredicted RBP7.46□□□□□ -1.22
SSXP4-201ENST00000451349 ZNF710Q8N1W2 664 aa7.46□□□□□ -1.22
SSXP4-201ENST00000451349 ZNF467Q7Z7K2 595 aaPredicted RBP7.45□□□□□ -1.22
SSXP4-201ENST00000451349 ERBB3P21860 1342 aa7.45□□□□□ -1.22
SSXP4-201ENST00000451349 G3V3G9 751 aa7.44□□□□□ -1.22
SSXP4-201ENST00000451349 DOK7Q18PE1 504 aa7.44□□□□□ -1.22
SSXP4-201ENST00000451349 DCAF8Q5TAQ9 597 aa7.44□□□□□ -1.22
SSXP4-201ENST00000451349 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.44□□□□□ -1.22
SSXP4-201ENST00000451349 RIMBP2O15034 1052 aa7.43□□□□□ -1.22
SSXP4-201ENST00000451349 PYGBP11216 843 aa7.43□□□□□ -1.22
SSXP4-201ENST00000451349 PCDHB8Q9UN66 801 aa7.43□□□□□ -1.22
SSXP4-201ENST00000451349 HOXB3P14651 431 aaPredicted RBP7.41□□□□□ -1.22
SSXP4-201ENST00000451349 ILDR1Q86SU0 546 aaPredicted RBP7.38□□□□□ -1.23
SSXP4-201ENST00000451349 VARS2Q5ST30 1063 aaKnown RBP7.36□□□□□ -1.23
SSXP4-201ENST00000451349 ZNF687Q8N1G0 1237 aa7.36□□□□□ -1.23
SSXP4-201ENST00000451349 ZSWIM6Q9HCJ5 1215 aa7.36□□□□□ -1.23
SSXP4-201ENST00000451349 BOLA1Q9Y3E2 137 aa7.36□□□□□ -1.23
SSXP4-201ENST00000451349 SLC24A1O60721 1099 aa7.34□□□□□ -1.23
SSXP4-201ENST00000451349 FBXO3Q9UK99 471 aa7.34□□□□□ -1.23
SSXP4-201ENST00000451349 GSE1Q14687 1217 aa7.33□□□□□ -1.24
SSXP4-201ENST00000451349 PSEN1P49768 467 aa7.32□□□□□ -1.24
SSXP4-201ENST00000451349 CHRM1P11229 460 aaPredicted RBP7.31□□□□□ -1.24
SSXP4-201ENST00000451349 PDAP1Q13442 181 aaKnown RBP7.27□□□□□ -1.25
SSXP4-201ENST00000451349 DPY19L2Q6NUT2 758 aa7.26□□□□□ -1.25
SSXP4-201ENST00000451349 PLA2G2EQ9NZK7 142 aa7.26□□□□□ -1.25
SSXP4-201ENST00000451349 ANKRD13DQ6ZTN6 518 aa7.24□□□□□ -1.25
SSXP4-201ENST00000451349 HCSTQ9UBK5 93 aa7.23□□□□□ -1.25
SSXP4-201ENST00000451349 LSM11P83369 360 aaKnown RBP eCLIP7.21□□□□□ -1.26
SSXP4-201ENST00000451349 GPR153Q6NV75 609 aa7.21□□□□□ -1.26
SSXP4-201ENST00000451349 CABP2Q9NPB3 220 aa7.21□□□□□ -1.26
SSXP4-201ENST00000451349 PBX2P40425 430 aa7.19□□□□□ -1.26
SSXP4-201ENST00000451349 VASPP50552 380 aaPredicted RBP7.18□□□□□ -1.26
SSXP4-201ENST00000451349 ZNF316A6NFI3 1004 aaPredicted RBP7.16□□□□□ -1.26
SSXP4-201ENST00000451349 RGS20O76081 388 aa7.15□□□□□ -1.26
SSXP4-201ENST00000451349 KLHL34Q8N239 644 aa7.14□□□□□ -1.27
SSXP4-201ENST00000451349 MICALL2Q8IY33 904 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms