RNA–Protein interactions for RNA: ENST00000450102.6

SCN5A-208, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 6,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-208ENST00000450102 GOLGA6L22H0YM25 854 aa14.34□□□□□ -0.11
SCN5A-208ENST00000450102 PPP1R15AO75807 674 aaPredicted RBP14.34□□□□□ -0.11
SCN5A-208ENST00000450102 TNNT2P45379 298 aaPredicted RBP14.34□□□□□ -0.11
SCN5A-208ENST00000450102 TAOK2Q9UL54 1235 aa14.33□□□□□ -0.12
SCN5A-208ENST00000450102 BECN1Q14457 450 aa14.32□□□□□ -0.12
SCN5A-208ENST00000450102 DNTTIP2Q5QJE6 756 aaKnown RBP14.31□□□□□ -0.12
SCN5A-208ENST00000450102 CHIC2Q9UKJ5 165 aa14.3□□□□□ -0.12
SCN5A-208ENST00000450102 MRS2Q9HD23 443 aa14.28□□□□□ -0.12
SCN5A-208ENST00000450102 CASC1Q6TDU7 716 aa14.27□□□□□ -0.12
SCN5A-208ENST00000450102 ABCC9O60706 1549 aa14.26□□□□□ -0.13
SCN5A-208ENST00000450102 ANP32EQ9BTT0 268 aa14.26□□□□□ -0.13
SCN5A-208ENST00000450102 CLSTN1O94985 981 aa14.25□□□□□ -0.13
SCN5A-208ENST00000450102 TSPY4P0CV99 314 aa14.25□□□□□ -0.13
SCN5A-208ENST00000450102 TSPY10P0CW01 314 aa14.25□□□□□ -0.13
SCN5A-208ENST00000450102 DDRGK1Q96HY6 314 aa14.24□□□□□ -0.13
SCN5A-208ENST00000450102 IRX6P78412 446 aaPredicted RBP14.23□□□□□ -0.13
SCN5A-208ENST00000450102 CSRNP3Q8WYN3 585 aa14.21□□□□□ -0.13
SCN5A-208ENST00000450102 PPM1GO15355 546 aaPredicted RBP14.21□□□□□ -0.13
SCN5A-208ENST00000450102 PLCB2Q00722 1185 aa14.21□□□□□ -0.14
SCN5A-208ENST00000450102 LMOD2Q6P5Q4 547 aa14.2□□□□□ -0.14
SCN5A-208ENST00000450102 ARID4BQ4LE39 1312 aaPredicted RBP14.2□□□□□ -0.14
SCN5A-208ENST00000450102 GOLGA2Q08379 1002 aa14.18□□□□□ -0.14
SCN5A-208ENST00000450102 GOLGA6L6A8MZA4 724 aa14.18□□□□□ -0.14
SCN5A-208ENST00000450102 FGD1P98174 961 aa14.18□□□□□ -0.14
SCN5A-208ENST00000450102 NAP1L2Q9ULW6 460 aaPredicted RBP14.17□□□□□ -0.14
SCN5A-208ENST00000450102 CFAP53Q96M91 514 aa14.17□□□□□ -0.14
SCN5A-208ENST00000450102 LAS1LQ9Y4W2 734 aaKnown RBP14.16□□□□□ -0.14
SCN5A-208ENST00000450102 FTSJ3Q8IY81 847 aaKnown RBP14.15□□□□□ -0.14
SCN5A-208ENST00000450102 OS9Q13438 667 aaPredicted RBP14.14□□□□□ -0.15
SCN5A-208ENST00000450102 ISY1Q9ULR0 285 aaKnown RBP14.13□□□□□ -0.15
SCN5A-208ENST00000450102 NRDCO43847 1150 aa14.11□□□□□ -0.15
SCN5A-208ENST00000450102 KCNJ4P48050 445 aa14.11□□□□□ -0.15
SCN5A-208ENST00000450102 NAP1L5Q96NT1 182 aaPredicted RBP14.09□□□□□ -0.15
SCN5A-208ENST00000450102 KCNH8Q96L42 1107 aa14.08□□□□□ -0.15
SCN5A-208ENST00000450102 PRM3Q9NNZ6 103 aa14.08□□□□□ -0.15
SCN5A-208ENST00000450102 HIRIP3Q9BW71 556 aaPredicted RBP14.07□□□□□ -0.16
SCN5A-208ENST00000450102 MAPK8IP3Q9UPT6 1336 aa14.07□□□□□ -0.16
SCN5A-208ENST00000450102 NEUROD2Q15784 382 aa14.06□□□□□ -0.16
SCN5A-208ENST00000450102 RGL3Q3MIN7 710 aa14.06□□□□□ -0.16
SCN5A-208ENST00000450102 EIF4G2P78344 907 aaKnown RBP eCLIP14.05□□□□□ -0.16
SCN5A-208ENST00000450102 CHMP7Q8WUX9 453 aaPredicted RBP14.05□□□□□ -0.16
SCN5A-208ENST00000450102 SENP3-EIF4A1A0A087X0R7 540 aa14.05□□□□□ -0.16
SCN5A-208ENST00000450102 GOLGA6L4A6NEF3 574 aa14.05□□□□□ -0.16
SCN5A-208ENST00000450102 HSP90AB1P08238 724 aaKnown RBP14.04□□□□□ -0.16
SCN5A-208ENST00000450102 KNSTRNQ9Y448 316 aa14.04□□□□□ -0.16
SCN5A-208ENST00000450102 ERICH6BQ5W0A0 696 aa14.02□□□□□ -0.16
SCN5A-208ENST00000450102 NUDCQ9Y266 331 aa14.02□□□□□ -0.17
SCN5A-208ENST00000450102 MTUS2Q5JR59 1369 aa14.02□□□□□ -0.17
SCN5A-208ENST00000450102 CDCA8Q53HL2 280 aa14.01□□□□□ -0.17
SCN5A-208ENST00000450102 L1TD1Q5T7N2 865 aaKnown RBP14.01□□□□□ -0.17
SCN5A-208ENST00000450102 PNNQ9H307 717 aaKnown RBP14.01□□□□□ -0.17
SCN5A-208ENST00000450102 POGKQ9P215 609 aa14□□□□□ -0.17
SCN5A-208ENST00000450102 CHAF1AQ13111 956 aaPredicted RBP13.99□□□□□ -0.17
SCN5A-208ENST00000450102 FRAT1Q92837 279 aaPredicted RBP13.99□□□□□ -0.17
SCN5A-208ENST00000450102 RRP7BPQ9NSQ0 103 aa13.99□□□□□ -0.17
SCN5A-208ENST00000450102 KIAA2012Q0VF49 1180 aa13.98□□□□□ -0.17
SCN5A-208ENST00000450102 AMER1Q5JTC6 1135 aaPredicted RBP13.98□□□□□ -0.17
SCN5A-208ENST00000450102 DRC7Q8IY82 874 aa13.97□□□□□ -0.17
SCN5A-208ENST00000450102 CHMP4BQ9H444 224 aaKnown RBP13.97□□□□□ -0.17
SCN5A-208ENST00000450102 RGS3P49796 1198 aa13.97□□□□□ -0.17
SCN5A-208ENST00000450102 GNL2Q13823 731 aaKnown RBP13.97□□□□□ -0.17
SCN5A-208ENST00000450102 NOC3LQ8WTT2 800 aaKnown RBP13.95□□□□□ -0.18
SCN5A-208ENST00000450102 U2SURPO15042 1029 aaKnown RBP13.94□□□□□ -0.18
SCN5A-208ENST00000450102 RTN4Q9NQC3 1192 aaKnown RBP13.92□□□□□ -0.18
SCN5A-208ENST00000450102 PLEKHD1A6NEE1 506 aa13.91□□□□□ -0.18
SCN5A-208ENST00000450102 SOX12O15370 315 aa13.91□□□□□ -0.18
SCN5A-208ENST00000450102 MCCP23508 829 aa13.91□□□□□ -0.18
SCN5A-208ENST00000450102 MS4A1P11836 297 aa13.9□□□□□ -0.18
SCN5A-208ENST00000450102 TMX4Q9H1E5 349 aaPredicted RBP13.9□□□□□ -0.18
SCN5A-208ENST00000450102 PDE4CQ08493 712 aa13.89□□□□□ -0.19
SCN5A-208ENST00000450102 MSNP26038 577 aaKnown RBP13.88□□□□□ -0.19
SCN5A-208ENST00000450102 CARD11Q9BXL7 1154 aa13.88□□□□□ -0.19
SCN5A-208ENST00000450102 HSCBQ8IWL3 235 aa13.88□□□□□ -0.19
SCN5A-208ENST00000450102 MIER1Q8N108 512 aa13.87□□□□□ -0.19
SCN5A-208ENST00000450102 ZNF330Q9Y3S2 320 aaPredicted RBP13.84□□□□□ -0.19
SCN5A-208ENST00000450102 SUPT16HQ9Y5B9 1047 aaKnown RBP13.84□□□□□ -0.19
SCN5A-208ENST00000450102 A0A0U1RQG5 324 aaPredicted RBP13.84□□□□□ -0.19
SCN5A-208ENST00000450102 TRHP20396 242 aaPredicted RBP13.84□□□□□ -0.19
SCN5A-208ENST00000450102 CC2D1BQ5T0F9 858 aaKnown RBP13.83□□□□□ -0.2
SCN5A-208ENST00000450102 SPRYD3Q8NCJ5 442 aa13.82□□□□□ -0.2
SCN5A-208ENST00000450102 RTF1Q92541 710 aaKnown RBP13.82□□□□□ -0.2
SCN5A-208ENST00000450102 KIAA1211Q6ZU35 1233 aa13.81□□□□□ -0.2
SCN5A-208ENST00000450102 KRI1Q8N9T8 703 aaKnown RBP13.8□□□□□ -0.2
SCN5A-208ENST00000450102 G3V3G9 751 aa13.79□□□□□ -0.2
SCN5A-208ENST00000450102 DCAF8Q5TAQ9 597 aa13.79□□□□□ -0.2
SCN5A-208ENST00000450102 APBB1O00213 710 aa13.79□□□□□ -0.2
SCN5A-208ENST00000450102 HDGFP51858 240 aaKnown RBP13.78□□□□□ -0.2
SCN5A-208ENST00000450102 MLECQ14165 292 aa13.78□□□□□ -0.2
SCN5A-208ENST00000450102 CFDP1Q9UEE9 299 aaPredicted RBP13.78□□□□□ -0.2
SCN5A-208ENST00000450102 CCDC9Q9Y3X0 531 aaKnown RBP13.78□□□□□ -0.2
SCN5A-208ENST00000450102 CSB-PGBD3P0DP91 1061 aa13.77□□□□□ -0.2
SCN5A-208ENST00000450102 SRPK2P78362 688 aaKnown RBP13.77□□□□□ -0.21
SCN5A-208ENST00000450102 NOP58Q9Y2X3 529 aaKnown RBP13.76□□□□□ -0.21
SCN5A-208ENST00000450102 CFAP44Q96MT7 982 aa13.76□□□□□ -0.21
SCN5A-208ENST00000450102 CEP89Q96ST8 783 aa13.76□□□□□ -0.21
SCN5A-208ENST00000450102 GORABQ5T7V8 394 aa13.75□□□□□ -0.21
SCN5A-208ENST00000450102 RSF1Q96T23 1441 aaPredicted RBP13.75□□□□□ -0.21
SCN5A-208ENST00000450102 TPM4P67936 248 aa13.75□□□□□ -0.21
SCN5A-208ENST00000450102 RASSF8Q8NHQ8 419 aa13.75□□□□□ -0.21
SCN5A-208ENST00000450102 HSP90B1P14625 803 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms