RNA–Protein interactions for RNA: ENST00000449833.6

SHANK2-211, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 8,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-211ENST00000449833 RTN4Q9NQC3 1192 aaKnown RBP15.17■□□□□ 0.02
SHANK2-211ENST00000449833 HSP90AA2PQ14568 343 aaPredicted RBP15.16■□□□□ 0.02
SHANK2-211ENST00000449833 CASC1Q6TDU7 716 aa15.15■□□□□ 0.02
SHANK2-211ENST00000449833 LAS1LQ9Y4W2 734 aaKnown RBP15.15■□□□□ 0.02
SHANK2-211ENST00000449833 SALL2Q9Y467 1007 aaPredicted RBP15.15■□□□□ 0.02
SHANK2-211ENST00000449833 DEKP35659 375 aaKnown RBP15.14■□□□□ 0.01
SHANK2-211ENST00000449833 DDX10Q13206 875 aaKnown RBP15.12■□□□□ 0.01
SHANK2-211ENST00000449833 APPP05067 770 aa15.11■□□□□ 0.01
SHANK2-211ENST00000449833 PNNQ9H307 717 aaKnown RBP15.09■□□□□ 0.01
SHANK2-211ENST00000449833 MRS2Q9HD23 443 aa15.06■□□□□ 0
SHANK2-211ENST00000449833 DCAF1Q9Y4B6 1507 aa15.06■□□□□ 0
SHANK2-211ENST00000449833 PODXL2Q9NZ53 605 aa15.05■□□□□ 0
SHANK2-211ENST00000449833 ESF1Q9H501 851 aaKnown RBP15.04■□□□□ -0
SHANK2-211ENST00000449833 GOLGA6L1Q8N7Z2 621 aa15.04■□□□□ -0
SHANK2-211ENST00000449833 IRX6P78412 446 aaPredicted RBP15.03■□□□□ -0
SHANK2-211ENST00000449833 STAG3Q9UJ98 1225 aa15.03■□□□□ -0
SHANK2-211ENST00000449833 CCDC180Q9P1Z9 1646 aa15.03■□□□□ -0
SHANK2-211ENST00000449833 GOLGA6L3A6NEY3 463 aa15.02■□□□□ -0
SHANK2-211ENST00000449833 ZNF777Q9ULD5 760 aaPredicted RBP15□□□□□ -0.01
SHANK2-211ENST00000449833 KIAA2012Q0VF49 1180 aa14.98□□□□□ -0.01
SHANK2-211ENST00000449833 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.98□□□□□ -0.01
SHANK2-211ENST00000449833 FBLN2P98095 1184 aa14.97□□□□□ -0.01
SHANK2-211ENST00000449833 PKNOX2Q96KN3 472 aa14.97□□□□□ -0.01
SHANK2-211ENST00000449833 PLCB2Q00722 1185 aa14.97□□□□□ -0.01
SHANK2-211ENST00000449833 VSIG10Q8N0Z9 540 aa14.96□□□□□ -0.02
SHANK2-211ENST00000449833 CHGAP10645 457 aaKnown RBP14.94□□□□□ -0.02
SHANK2-211ENST00000449833 TPRNQ4KMQ1 711 aa14.94□□□□□ -0.02
SHANK2-211ENST00000449833 HSP90AB1P08238 724 aaKnown RBP14.93□□□□□ -0.02
SHANK2-211ENST00000449833 FTSJ3Q8IY81 847 aaKnown RBP14.93□□□□□ -0.02
SHANK2-211ENST00000449833 GOLGA6L4A6NEF3 574 aa14.92□□□□□ -0.02
SHANK2-211ENST00000449833 NOM1Q5C9Z4 860 aaKnown RBP14.9□□□□□ -0.02
SHANK2-211ENST00000449833 P3H3Q8IVL6 736 aa14.89□□□□□ -0.03
SHANK2-211ENST00000449833 MIER1Q8N108 512 aa14.89□□□□□ -0.03
SHANK2-211ENST00000449833 TULP1O00294 542 aaPredicted RBP14.88□□□□□ -0.03
SHANK2-211ENST00000449833 DRC7Q8IY82 874 aa14.88□□□□□ -0.03
SHANK2-211ENST00000449833 MTERF4Q7Z6M4 381 aaKnown RBP14.88□□□□□ -0.03
SHANK2-211ENST00000449833 ARID3CA6NKF2 412 aa14.87□□□□□ -0.03
SHANK2-211ENST00000449833 HSCBQ8IWL3 235 aa14.84□□□□□ -0.03
SHANK2-211ENST00000449833 CHMP4BQ9H444 224 aaKnown RBP14.84□□□□□ -0.03
SHANK2-211ENST00000449833 PPP4R2Q9NY27 417 aa14.81□□□□□ -0.04
SHANK2-211ENST00000449833 HTATSF1O43719 755 aaKnown RBP14.81□□□□□ -0.04
SHANK2-211ENST00000449833 MAP7D2Q96T17 732 aa14.81□□□□□ -0.04
SHANK2-211ENST00000449833 EIF4G2P78344 907 aaKnown RBP eCLIP14.81□□□□□ -0.04
SHANK2-211ENST00000449833 CFAP44Q96MT7 982 aa14.81□□□□□ -0.04
SHANK2-211ENST00000449833 NOC3LQ8WTT2 800 aaKnown RBP14.81□□□□□ -0.04
SHANK2-211ENST00000449833 STK11IPQ8N1F8 1099 aa14.81□□□□□ -0.04
SHANK2-211ENST00000449833 FGD1P98174 961 aa14.81□□□□□ -0.04
SHANK2-211ENST00000449833 SYAP1Q96A49 352 aaPredicted RBP14.8□□□□□ -0.04
SHANK2-211ENST00000449833 SUPT16HQ9Y5B9 1047 aaKnown RBP14.8□□□□□ -0.04
SHANK2-211ENST00000449833 TEX35Q5T0J7 233 aa14.79□□□□□ -0.04
SHANK2-211ENST00000449833 GPS2Q13227 327 aa14.78□□□□□ -0.04
SHANK2-211ENST00000449833 CSRNP3Q8WYN3 585 aa14.78□□□□□ -0.04
SHANK2-211ENST00000449833 CFAP53Q96M91 514 aa14.77□□□□□ -0.04
SHANK2-211ENST00000449833 KDM2AQ9Y2K7 1162 aa14.77□□□□□ -0.04
SHANK2-211ENST00000449833 A0A0G2JS52 829 aa14.77□□□□□ -0.05
SHANK2-211ENST00000449833 GBP4Q96PP9 640 aa14.77□□□□□ -0.05
SHANK2-211ENST00000449833 TAF3Q5VWG9 929 aa14.77□□□□□ -0.05
SHANK2-211ENST00000449833 PRKCSHP14314 528 aaPredicted RBP14.77□□□□□ -0.05
SHANK2-211ENST00000449833 ZNF771Q7L3S4 317 aaPredicted RBP14.76□□□□□ -0.05
SHANK2-211ENST00000449833 MS4A1P11836 297 aa14.75□□□□□ -0.05
SHANK2-211ENST00000449833 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.75□□□□□ -0.05
SHANK2-211ENST00000449833 MCCP23508 829 aa14.75□□□□□ -0.05
SHANK2-211ENST00000449833 KCNJ4P48050 445 aa14.75□□□□□ -0.05
SHANK2-211ENST00000449833 RGS3P49796 1198 aa14.73□□□□□ -0.05
SHANK2-211ENST00000449833 CCDC66A2RUB6 948 aa14.73□□□□□ -0.05
SHANK2-211ENST00000449833 PHF14O94880 888 aa14.71□□□□□ -0.05
SHANK2-211ENST00000449833 CWC15Q9P013 229 aaKnown RBP14.71□□□□□ -0.05
SHANK2-211ENST00000449833 NAP1L2Q9ULW6 460 aaPredicted RBP14.71□□□□□ -0.06
SHANK2-211ENST00000449833 CDCA8Q53HL2 280 aa14.7□□□□□ -0.06
SHANK2-211ENST00000449833 HMGB1P09429 215 aaKnown RBP14.7□□□□□ -0.06
SHANK2-211ENST00000449833 KNSTRNQ9Y448 316 aa14.7□□□□□ -0.06
SHANK2-211ENST00000449833 ARID3AQ99856 593 aa14.69□□□□□ -0.06
SHANK2-211ENST00000449833 NEFHP12036 1026 aa14.68□□□□□ -0.06
SHANK2-211ENST00000449833 PLPPR3Q6T4P5 718 aa14.68□□□□□ -0.06
SHANK2-211ENST00000449833 TAOK2Q9UL54 1235 aa14.68□□□□□ -0.06
SHANK2-211ENST00000449833 CLSTN1O94985 981 aa14.68□□□□□ -0.06
SHANK2-211ENST00000449833 OS9Q13438 667 aaPredicted RBP14.67□□□□□ -0.06
SHANK2-211ENST00000449833 RBM19Q9Y4C8 960 aaKnown RBP14.67□□□□□ -0.06
SHANK2-211ENST00000449833 CHIC2Q9UKJ5 165 aa14.66□□□□□ -0.06
SHANK2-211ENST00000449833 C14orf37Q86TY3 774 aa14.66□□□□□ -0.06
SHANK2-211ENST00000449833 ZBTB7CA1YPR0 619 aa14.65□□□□□ -0.06
SHANK2-211ENST00000449833 GNL2Q13823 731 aaKnown RBP14.65□□□□□ -0.06
SHANK2-211ENST00000449833 MAPK8IP3Q9UPT6 1336 aa14.65□□□□□ -0.06
SHANK2-211ENST00000449833 HIRIP3Q9BW71 556 aaPredicted RBP14.65□□□□□ -0.06
SHANK2-211ENST00000449833 TPM4P67936 248 aa14.65□□□□□ -0.06
SHANK2-211ENST00000449833 TSPY4P0CV99 314 aa14.64□□□□□ -0.07
SHANK2-211ENST00000449833 TSPY10P0CW01 314 aa14.64□□□□□ -0.07
SHANK2-211ENST00000449833 CSPP1Q1MSJ5 1256 aa14.64□□□□□ -0.07
SHANK2-211ENST00000449833 RRP12Q5JTH9 1297 aaKnown RBP14.63□□□□□ -0.07
SHANK2-211ENST00000449833 GOLGA2Q08379 1002 aa14.63□□□□□ -0.07
SHANK2-211ENST00000449833 MTUS2Q5JR59 1369 aa14.62□□□□□ -0.07
SHANK2-211ENST00000449833 NCBP3Q53F19 620 aaKnown RBP14.62□□□□□ -0.07
SHANK2-211ENST00000449833 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.62□□□□□ -0.07
SHANK2-211ENST00000449833 FRAT1Q92837 279 aaPredicted RBP14.61□□□□□ -0.07
SHANK2-211ENST00000449833 CALD1Q05682 793 aaKnown RBP14.6□□□□□ -0.07
SHANK2-211ENST00000449833 NPM1P06748 294 aaKnown RBP eCLIP14.6□□□□□ -0.07
SHANK2-211ENST00000449833 RDXP35241 583 aaKnown RBP14.6□□□□□ -0.07
SHANK2-211ENST00000449833 HMMRO75330 724 aa14.6□□□□□ -0.07
SHANK2-211ENST00000449833 B4GALNT3Q6L9W6 998 aa14.59□□□□□ -0.07
SHANK2-211ENST00000449833 SPRYD3Q8NCJ5 442 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms