RNA–Protein interactions for RNA: ENST00000449395.5

PRDM15-208, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 6,662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-208ENST00000449395 CHIC2Q9UKJ5 165 aa14.24□□□□□ -0.13
PRDM15-208ENST00000449395 BAZ1BQ9UIG0 1483 aaKnown RBP14.23□□□□□ -0.13
PRDM15-208ENST00000449395 FKBP8Q14318 412 aa14.23□□□□□ -0.13
PRDM15-208ENST00000449395 HNRNPUQ00839 825 aaKnown RBP eCLIP14.19□□□□□ -0.14
PRDM15-208ENST00000449395 FAM69CQ0P6D2 419 aa14.19□□□□□ -0.14
PRDM15-208ENST00000449395 DDX10Q13206 875 aaKnown RBP14.19□□□□□ -0.14
PRDM15-208ENST00000449395 FAM9BQ8IZU0 186 aa14.18□□□□□ -0.14
PRDM15-208ENST00000449395 PIP4K2BP78356 416 aa14.17□□□□□ -0.14
PRDM15-208ENST00000449395 GGT6Q6P531 493 aa14.17□□□□□ -0.14
PRDM15-208ENST00000449395 MSH5O43196 834 aa14.16□□□□□ -0.14
PRDM15-208ENST00000449395 DCAF1Q9Y4B6 1507 aa14.14□□□□□ -0.15
PRDM15-208ENST00000449395 PDS5BQ9NTI5 1447 aa14.14□□□□□ -0.15
PRDM15-208ENST00000449395 HSP90AA1P07900 732 aaKnown RBP14.13□□□□□ -0.15
PRDM15-208ENST00000449395 HDGFP51858 240 aaKnown RBP14.13□□□□□ -0.15
PRDM15-208ENST00000449395 SALL2Q9Y467 1007 aaPredicted RBP14.13□□□□□ -0.15
PRDM15-208ENST00000449395 SF3B2Q13435 895 aaKnown RBP14.13□□□□□ -0.15
PRDM15-208ENST00000449395 UPF2Q9HAU5 1272 aaKnown RBP14.12□□□□□ -0.15
PRDM15-208ENST00000449395 EIF4G1Q04637 1599 aaKnown RBP14.11□□□□□ -0.15
PRDM15-208ENST00000449395 KDM2AQ9Y2K7 1162 aa14.11□□□□□ -0.15
PRDM15-208ENST00000449395 ANP32BQ92688 251 aaKnown RBP14.11□□□□□ -0.15
PRDM15-208ENST00000449395 TMC1Q8TDI8 760 aa14.09□□□□□ -0.15
PRDM15-208ENST00000449395 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.08□□□□□ -0.15
PRDM15-208ENST00000449395 SOX12O15370 315 aa14.08□□□□□ -0.16
PRDM15-208ENST00000449395 NACADO15069 1562 aa14.08□□□□□ -0.16
PRDM15-208ENST00000449395 PAK3O75914 559 aaPredicted RBP14.08□□□□□ -0.16
PRDM15-208ENST00000449395 POGKQ9P215 609 aa14.07□□□□□ -0.16
PRDM15-208ENST00000449395 CSB-PGBD3P0DP91 1061 aa14.06□□□□□ -0.16
PRDM15-208ENST00000449395 CCDC136Q96JN2 1154 aa14.05□□□□□ -0.16
PRDM15-208ENST00000449395 ZCCHC6Q5VYS8 1495 aaKnown RBP14.04□□□□□ -0.16
PRDM15-208ENST00000449395 EID1Q9Y6B2 187 aa14.04□□□□□ -0.16
PRDM15-208ENST00000449395 SMARCA2P51531 1590 aa14.04□□□□□ -0.16
PRDM15-208ENST00000449395 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.04□□□□□ -0.16
PRDM15-208ENST00000449395 WDR43Q15061 677 aaKnown RBP eCLIP14.03□□□□□ -0.16
PRDM15-208ENST00000449395 PPP1R1BQ9UD71 204 aaPredicted RBP14.01□□□□□ -0.17
PRDM15-208ENST00000449395 PPM1GO15355 546 aaPredicted RBP14.01□□□□□ -0.17
PRDM15-208ENST00000449395 MRS2Q9HD23 443 aa14.01□□□□□ -0.17
PRDM15-208ENST00000449395 MTUS2Q5JR59 1369 aa14□□□□□ -0.17
PRDM15-208ENST00000449395 TMX4Q9H1E5 349 aaPredicted RBP13.99□□□□□ -0.17
PRDM15-208ENST00000449395 EIF5BO60841 1220 aaKnown RBP13.99□□□□□ -0.17
PRDM15-208ENST00000449395 CFDP1Q9UEE9 299 aaPredicted RBP13.98□□□□□ -0.17
PRDM15-208ENST00000449395 CCDC180Q9P1Z9 1646 aa13.98□□□□□ -0.17
PRDM15-208ENST00000449395 RGL3Q3MIN7 710 aa13.98□□□□□ -0.17
PRDM15-208ENST00000449395 NBR1Q14596 966 aa13.95□□□□□ -0.18
PRDM15-208ENST00000449395 HIRIP3Q9BW71 556 aaPredicted RBP13.95□□□□□ -0.18
PRDM15-208ENST00000449395 MIER1Q8N108 512 aa13.94□□□□□ -0.18
PRDM15-208ENST00000449395 CLIP1P30622 1438 aa13.94□□□□□ -0.18
PRDM15-208ENST00000449395 NUTM2BA6NNL0 878 aaPredicted RBP13.93□□□□□ -0.18
PRDM15-208ENST00000449395 NUTM2EB1AL46 878 aaPredicted RBP13.93□□□□□ -0.18
PRDM15-208ENST00000449395 NUTM2AQ8IVF1 878 aaPredicted RBP13.93□□□□□ -0.18
PRDM15-208ENST00000449395 IRX6P78412 446 aaPredicted RBP13.92□□□□□ -0.18
PRDM15-208ENST00000449395 EIF4G2P78344 907 aaKnown RBP eCLIP13.92□□□□□ -0.186e-7■■■■■ 40.3
PRDM15-208ENST00000449395 EVA1CP58658 441 aa13.91□□□□□ -0.18
PRDM15-208ENST00000449395 SAFB2Q14151 953 aaKnown RBP eCLIP13.91□□□□□ -0.18
PRDM15-208ENST00000449395 RRP7BPQ9NSQ0 103 aa13.9□□□□□ -0.18
PRDM15-208ENST00000449395 ZNF330Q9Y3S2 320 aaPredicted RBP13.9□□□□□ -0.18
PRDM15-208ENST00000449395 TULP1O00294 542 aaPredicted RBP13.9□□□□□ -0.18
PRDM15-208ENST00000449395 STK26Q9P289 416 aa13.88□□□□□ -0.19
PRDM15-208ENST00000449395 DNAJC5BQ9UF47 199 aa13.88□□□□□ -0.19
PRDM15-208ENST00000449395 MYH16Q9H6N6 1097 aa13.87□□□□□ -0.19
PRDM15-208ENST00000449395 CARMIL2Q6F5E8 1435 aa13.87□□□□□ -0.19
PRDM15-208ENST00000449395 KANK1Q14678 1352 aa13.86□□□□□ -0.19
PRDM15-208ENST00000449395 TDRD9Q8NDG6 1382 aaKnown RBP13.86□□□□□ -0.19
PRDM15-208ENST00000449395 G3V3G9 751 aa13.86□□□□□ -0.19
PRDM15-208ENST00000449395 DCAF8Q5TAQ9 597 aa13.86□□□□□ -0.19
PRDM15-208ENST00000449395 NUTM2FA1L443 756 aa13.83□□□□□ -0.19
PRDM15-208ENST00000449395 RSF1Q96T23 1441 aaPredicted RBP13.83□□□□□ -0.2
PRDM15-208ENST00000449395 NUTM2DQ5VT03 806 aaPredicted RBP13.82□□□□□ -0.2
PRDM15-208ENST00000449395 GOLGA3Q08378 1498 aa13.82□□□□□ -0.2
PRDM15-208ENST00000449395 CEP162Q5TB80 1403 aa13.8□□□□□ -0.2
PRDM15-208ENST00000449395 EEA1Q15075 1411 aa13.79□□□□□ -0.2
PRDM15-208ENST00000449395 ATF3P18847 181 aa13.78□□□□□ -0.2
PRDM15-208ENST00000449395 GLIPR1L2Q4G1C9 344 aa13.77□□□□□ -0.2
PRDM15-208ENST00000449395 GOLGA2Q08379 1002 aa13.77□□□□□ -0.2
PRDM15-208ENST00000449395 CFAP44Q96MT7 982 aa13.77□□□□□ -0.21
PRDM15-208ENST00000449395 DDRGK1Q96HY6 314 aa13.77□□□□□ -0.21
PRDM15-208ENST00000449395 BECN1Q14457 450 aa13.76□□□□□ -0.21
PRDM15-208ENST00000449395 SOGA1O94964 1423 aa13.76□□□□□ -0.21
PRDM15-208ENST00000449395 CEP164Q9UPV0 1460 aa13.76□□□□□ -0.21
PRDM15-208ENST00000449395 WASHC2CQ9Y4E1 1318 aa13.75□□□□□ -0.21
PRDM15-208ENST00000449395 MYO15BQ96JP2 1530 aa13.75□□□□□ -0.21
PRDM15-208ENST00000449395 EFCAB2Q5VUJ9 269 aa13.75□□□□□ -0.21
PRDM15-208ENST00000449395 ISY1Q9ULR0 285 aaKnown RBP13.74□□□□□ -0.21
PRDM15-208ENST00000449395 CFAP53Q96M91 514 aa13.73□□□□□ -0.21
PRDM15-208ENST00000449395 JPH4Q96JJ6 628 aa13.73□□□□□ -0.21
PRDM15-208ENST00000449395 SRPK2P78362 688 aaKnown RBP13.73□□□□□ -0.21
PRDM15-208ENST00000449395 SYTL4Q96C24 671 aaPredicted RBP13.72□□□□□ -0.21
PRDM15-208ENST00000449395 KNSTRNQ9Y448 316 aa13.72□□□□□ -0.21
PRDM15-208ENST00000449395 CDCA8Q53HL2 280 aa13.72□□□□□ -0.21
PRDM15-208ENST00000449395 SENP3-EIF4A1A0A087X0R7 540 aa13.72□□□□□ -0.21
PRDM15-208ENST00000449395 KIF3BO15066 747 aa13.71□□□□□ -0.21
PRDM15-208ENST00000449395 NCBP3Q53F19 620 aaKnown RBP13.71□□□□□ -0.22
PRDM15-208ENST00000449395 WRNQ14191 1432 aaPredicted RBP eCLIP13.71□□□□□ -0.22
PRDM15-208ENST00000449395 CARD11Q9BXL7 1154 aa13.7□□□□□ -0.22
PRDM15-208ENST00000449395 NCLP19338 710 aaKnown RBP13.7□□□□□ -0.22
PRDM15-208ENST00000449395 NGDNQ8NEJ9 315 aaKnown RBP13.7□□□□□ -0.22
PRDM15-208ENST00000449395 SUPT16HQ9Y5B9 1047 aaKnown RBP13.69□□□□□ -0.22
PRDM15-208ENST00000449395 KIF27Q86VH2 1401 aa13.67□□□□□ -0.22
PRDM15-208ENST00000449395 GOLGA6L22H0YM25 854 aa13.67□□□□□ -0.22
PRDM15-208ENST00000449395 CUX2O14529 1486 aa13.67□□□□□ -0.22
PRDM15-208ENST00000449395 GTF2E1P29083 439 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms