RNA–Protein interactions for RNA: ENST00000449193.6

SKIDA1-202, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS P2 TSL 3 BASIC

Gene SKIDA1, Length 6,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-202ENST00000449193 RSF1Q96T23 1441 aaPredicted RBP23.55■■□□□ 1.36
SKIDA1-202ENST00000449193 RRP7BPQ9NSQ0 103 aa23.52■■□□□ 1.36
SKIDA1-202ENST00000449193 EIF4G2P78344 907 aaKnown RBP eCLIP23.51■■□□□ 1.35
SKIDA1-202ENST00000449193 SENP3Q9H4L4 574 aaPredicted RBP23.51■■□□□ 1.35
SKIDA1-202ENST00000449193 CLIP1P30622 1438 aa23.5■■□□□ 1.35
SKIDA1-202ENST00000449193 CDK11BP21127 795 aaKnown RBP23.46■■□□□ 1.35
SKIDA1-202ENST00000449193 RB1CC1Q8TDY2 1594 aa23.46■■□□□ 1.35
SKIDA1-202ENST00000449193 DCAF1Q9Y4B6 1507 aa23.45■■□□□ 1.34
SKIDA1-202ENST00000449193 CFAP53Q96M91 514 aa23.44■■□□□ 1.34
SKIDA1-202ENST00000449193 CDCA8Q53HL2 280 aa23.43■■□□□ 1.34
SKIDA1-202ENST00000449193 RGL3Q3MIN7 710 aa23.4■■□□□ 1.34
SKIDA1-202ENST00000449193 CFDP1Q9UEE9 299 aaPredicted RBP23.38■■□□□ 1.33
SKIDA1-202ENST00000449193 EEA1Q15075 1411 aa23.33■■□□□ 1.33
SKIDA1-202ENST00000449193 ARXQ96QS3 562 aa23.33■■□□□ 1.33
SKIDA1-202ENST00000449193 CCDC180Q9P1Z9 1646 aa23.33■■□□□ 1.32
SKIDA1-202ENST00000449193 KNSTRNQ9Y448 316 aa23.31■■□□□ 1.32
SKIDA1-202ENST00000449193 HIRIP3Q9BW71 556 aaPredicted RBP23.3■■□□□ 1.32
SKIDA1-202ENST00000449193 GOLGA3Q08378 1498 aa23.3■■□□□ 1.32
SKIDA1-202ENST00000449193 PPM1GO15355 546 aaPredicted RBP23.29■■□□□ 1.32
SKIDA1-202ENST00000449193 ERCC6Q03468 1493 aa23.28■■□□□ 1.32
SKIDA1-202ENST00000449193 EIF5BO60841 1220 aaKnown RBP23.28■■□□□ 1.32
SKIDA1-202ENST00000449193 NCLP19338 710 aaKnown RBP23.27■■□□□ 1.32
SKIDA1-202ENST00000449193 BAZ1BQ9UIG0 1483 aaKnown RBP23.25■■□□□ 1.31
SKIDA1-202ENST00000449193 POGKQ9P215 609 aa23.25■■□□□ 1.31
SKIDA1-202ENST00000449193 KIF27Q86VH2 1401 aa23.24■■□□□ 1.31
SKIDA1-202ENST00000449193 LMOD2Q6P5Q4 547 aa23.24■■□□□ 1.31
SKIDA1-202ENST00000449193 BECN1Q14457 450 aa23.23■■□□□ 1.31
SKIDA1-202ENST00000449193 CARD11Q9BXL7 1154 aa23.21■■□□□ 1.31
SKIDA1-202ENST00000449193 MAPK8IP3Q9UPT6 1336 aa23.21■■□□□ 1.31
SKIDA1-202ENST00000449193 NUDCQ9Y266 331 aa23.21■■□□□ 1.31
SKIDA1-202ENST00000449193 WRNQ14191 1432 aaPredicted RBP eCLIP23.19■■□□□ 1.3
SKIDA1-202ENST00000449193 CASC1Q6TDU7 716 aa23.19■■□□□ 1.3
SKIDA1-202ENST00000449193 IRX6P78412 446 aaPredicted RBP23.18■■□□□ 1.3
SKIDA1-202ENST00000449193 NBR1Q14596 966 aa23.17■■□□□ 1.3
SKIDA1-202ENST00000449193 FTSJ3Q8IY81 847 aaKnown RBP23.16■■□□□ 1.3
SKIDA1-202ENST00000449193 NPHP1O15259 732 aa23.16■■□□□ 1.3
SKIDA1-202ENST00000449193 DDRGK1Q96HY6 314 aa23.16■■□□□ 1.3
SKIDA1-202ENST00000449193 GOLGA6L22H0YM25 854 aa23.15■■□□□ 1.3
SKIDA1-202ENST00000449193 CEP162Q5TB80 1403 aa23.14■■□□□ 1.29
SKIDA1-202ENST00000449193 LAS1LQ9Y4W2 734 aaKnown RBP23.11■■□□□ 1.29
SKIDA1-202ENST00000449193 HDGFP51858 240 aaKnown RBP23.11■■□□□ 1.29
SKIDA1-202ENST00000449193 ZRSR1Q15695 479 aaKnown RBP23.11■■□□□ 1.29
SKIDA1-202ENST00000449193 TRHP20396 242 aaPredicted RBP23.1■■□□□ 1.29
SKIDA1-202ENST00000449193 MIER1Q8N108 512 aa23.1■■□□□ 1.29
SKIDA1-202ENST00000449193 ANP32EQ9BTT0 268 aa23.09■■□□□ 1.29
SKIDA1-202ENST00000449193 KANK1Q14678 1352 aa23.06■■□□□ 1.28
SKIDA1-202ENST00000449193 NACADO15069 1562 aa23.06■■□□□ 1.28
SKIDA1-202ENST00000449193 NEUROD2Q15784 382 aa23.06■■□□□ 1.28
SKIDA1-202ENST00000449193 CHMP4BQ9H444 224 aaKnown RBP23.05■■□□□ 1.28
SKIDA1-202ENST00000449193 GLIPR1L2Q4G1C9 344 aa23.05■■□□□ 1.28
SKIDA1-202ENST00000449193 PNNQ9H307 717 aaKnown RBP23.05■■□□□ 1.28
SKIDA1-202ENST00000449193 CEP164Q9UPV0 1460 aa23.04■■□□□ 1.28
SKIDA1-202ENST00000449193 CCNB3Q8WWL7 1395 aa23.04■■□□□ 1.28
SKIDA1-202ENST00000449193 TRIM44Q96DX7 344 aaPredicted RBP22.98■■□□□ 1.27
SKIDA1-202ENST00000449193 OS9Q13438 667 aaPredicted RBP22.97■■□□□ 1.27
SKIDA1-202ENST00000449193 MS4A1P11836 297 aa22.97■■□□□ 1.27
SKIDA1-202ENST00000449193 U2SURPO15042 1029 aaKnown RBP22.97■■□□□ 1.27
SKIDA1-202ENST00000449193 TNNT2P45379 298 aaPredicted RBP22.97■■□□□ 1.27
SKIDA1-202ENST00000449193 TNIKQ9UKE5 1360 aa22.96■■□□□ 1.27
SKIDA1-202ENST00000449193 MLECQ14165 292 aa22.96■■□□□ 1.27
SKIDA1-202ENST00000449193 GOLGA2Q08379 1002 aa22.94■■□□□ 1.26
SKIDA1-202ENST00000449193 TMF1P82094 1093 aa22.93■■□□□ 1.26
SKIDA1-202ENST00000449193 FHAD1B1AJZ9 1412 aa22.92■■□□□ 1.26
SKIDA1-202ENST00000449193 TULP1O00294 542 aaPredicted RBP22.92■■□□□ 1.26
SKIDA1-202ENST00000449193 SENP3-EIF4A1A0A087X0R7 540 aa22.91■■□□□ 1.26
SKIDA1-202ENST00000449193 FRAT1Q92837 279 aaPredicted RBP22.91■■□□□ 1.26
SKIDA1-202ENST00000449193 EIF4G1Q04637 1599 aaKnown RBP22.9■■□□□ 1.26
SKIDA1-202ENST00000449193 CC2D1BQ5T0F9 858 aaKnown RBP22.89■■□□□ 1.26
SKIDA1-202ENST00000449193 FGD1P98174 961 aa22.89■■□□□ 1.25
SKIDA1-202ENST00000449193 SRPK2P78362 688 aaKnown RBP22.88■■□□□ 1.25
SKIDA1-202ENST00000449193 PTMAP06454 111 aaKnown RBP22.88■■□□□ 1.25
SKIDA1-202ENST00000449193 DCAF11Q8TEB1 546 aa22.86■■□□□ 1.25
SKIDA1-202ENST00000449193 KCNJ4P48050 445 aa22.84■■□□□ 1.25
SKIDA1-202ENST00000449193 TPRNQ4KMQ1 711 aa22.82■■□□□ 1.24
SKIDA1-202ENST00000449193 CARMIL1Q5VZK9 1371 aa22.82■■□□□ 1.24
SKIDA1-202ENST00000449193 SOX12O15370 315 aa22.81■■□□□ 1.24
SKIDA1-202ENST00000449193 SIN3AQ96ST3 1273 aa22.81■■□□□ 1.24
SKIDA1-202ENST00000449193 SUPT16HQ9Y5B9 1047 aaKnown RBP22.8■■□□□ 1.24
SKIDA1-202ENST00000449193 TAOK2Q9UL54 1235 aa22.79■■□□□ 1.24
SKIDA1-202ENST00000449193 GGT6Q6P531 493 aa22.79■■□□□ 1.24
SKIDA1-202ENST00000449193 BAZ1AQ9NRL2 1556 aaPredicted RBP22.78■■□□□ 1.24
SKIDA1-202ENST00000449193 MORC1Q86VD1 984 aa22.78■■□□□ 1.24
SKIDA1-202ENST00000449193 CUX2O14529 1486 aa22.78■■□□□ 1.24
SKIDA1-202ENST00000449193 RGS3P49796 1198 aa22.77■■□□□ 1.24
SKIDA1-202ENST00000449193 RTF1Q92541 710 aaKnown RBP22.77■■□□□ 1.24
SKIDA1-202ENST00000449193 NAP1L2Q9ULW6 460 aaPredicted RBP22.77■■□□□ 1.24
SKIDA1-202ENST00000449193 CARMIL2Q6F5E8 1435 aa22.75■■□□□ 1.23
SKIDA1-202ENST00000449193 HDGFL2Q7Z4V5 671 aaPredicted RBP22.75■■□□□ 1.23
SKIDA1-202ENST00000449193 SAFB2Q14151 953 aaKnown RBP eCLIP22.74■■□□□ 1.23
SKIDA1-202ENST00000449193 HSP90AB1P08238 724 aaKnown RBP22.72■■□□□ 1.23
SKIDA1-202ENST00000449193 GOLGA6L6A8MZA4 724 aa22.72■■□□□ 1.23
SKIDA1-202ENST00000449193 DNTTIP2Q5QJE6 756 aaKnown RBP22.71■■□□□ 1.23
SKIDA1-202ENST00000449193 PPP4R2Q9NY27 417 aa22.7■■□□□ 1.23
SKIDA1-202ENST00000449193 STK26Q9P289 416 aa22.69■■□□□ 1.22
SKIDA1-202ENST00000449193 MCCP23508 829 aa22.66■■□□□ 1.22
SKIDA1-202ENST00000449193 TIMELESSQ9UNS1 1208 aa22.66■■□□□ 1.22
SKIDA1-202ENST00000449193 CSB-PGBD3P0DP91 1061 aa22.66■■□□□ 1.22
SKIDA1-202ENST00000449193 PAK3O75914 559 aaPredicted RBP22.66■■□□□ 1.22
SKIDA1-202ENST00000449193 NRDCO43847 1150 aa22.65■■□□□ 1.22
SKIDA1-202ENST00000449193 CFAP44Q96MT7 982 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms