RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 ERCC6Q03468 1493 aa13.64□□□□□ -0.23
SCN10A-201ENST00000449082 C14orf37Q86TY3 774 aa13.63□□□□□ -0.23
SCN10A-201ENST00000449082 ARID4BQ4LE39 1312 aaPredicted RBP13.63□□□□□ -0.23
SCN10A-201ENST00000449082 MRS2Q9HD23 443 aa13.62□□□□□ -0.23
SCN10A-201ENST00000449082 A0A0G2JS52 829 aa13.62□□□□□ -0.23
SCN10A-201ENST00000449082 WRNQ14191 1432 aaPredicted RBP eCLIP13.62□□□□□ -0.23
SCN10A-201ENST00000449082 KIF27Q86VH2 1401 aa13.62□□□□□ -0.23
SCN10A-201ENST00000449082 ANP32BQ92688 251 aaKnown RBP13.62□□□□□ -0.23
SCN10A-201ENST00000449082 EIF4G2P78344 907 aaKnown RBP eCLIP13.61□□□□□ -0.23
SCN10A-201ENST00000449082 ZBTB7CA1YPR0 619 aa13.61□□□□□ -0.23
SCN10A-201ENST00000449082 CFDP1Q9UEE9 299 aaPredicted RBP13.6□□□□□ -0.23
SCN10A-201ENST00000449082 SENP3Q9H4L4 574 aaPredicted RBP13.58□□□□□ -0.24
SCN10A-201ENST00000449082 MYH16Q9H6N6 1097 aa13.57□□□□□ -0.24
SCN10A-201ENST00000449082 CCDC136Q96JN2 1154 aa13.57□□□□□ -0.24
SCN10A-201ENST00000449082 RGL3Q3MIN7 710 aa13.56□□□□□ -0.24
SCN10A-201ENST00000449082 PLEKHG5O94827 1062 aa13.55□□□□□ -0.24
SCN10A-201ENST00000449082 CDCA8Q53HL2 280 aa13.55□□□□□ -0.24
SCN10A-201ENST00000449082 CEP162Q5TB80 1403 aa13.55□□□□□ -0.24
SCN10A-201ENST00000449082 HAP1P54257 671 aaPredicted RBP13.54□□□□□ -0.24
SCN10A-201ENST00000449082 CFAP53Q96M91 514 aa13.52□□□□□ -0.25
SCN10A-201ENST00000449082 CEP164Q9UPV0 1460 aa13.51□□□□□ -0.25
SCN10A-201ENST00000449082 HIRIP3Q9BW71 556 aaPredicted RBP13.5□□□□□ -0.25
SCN10A-201ENST00000449082 BAZ1AQ9NRL2 1556 aaPredicted RBP13.48□□□□□ -0.25
SCN10A-201ENST00000449082 KNSTRNQ9Y448 316 aa13.47□□□□□ -0.25
SCN10A-201ENST00000449082 TNIKQ9UKE5 1360 aa13.46□□□□□ -0.25
SCN10A-201ENST00000449082 CARD11Q9BXL7 1154 aa13.45□□□□□ -0.26
SCN10A-201ENST00000449082 POGKQ9P215 609 aa13.44□□□□□ -0.26
SCN10A-201ENST00000449082 CCNB3Q8WWL7 1395 aa13.42□□□□□ -0.26
SCN10A-201ENST00000449082 PPM1GO15355 546 aaPredicted RBP13.42□□□□□ -0.26
SCN10A-201ENST00000449082 EIF4G1Q04637 1599 aaKnown RBP13.4□□□□□ -0.26
SCN10A-201ENST00000449082 FHAD1B1AJZ9 1412 aa13.4□□□□□ -0.26
SCN10A-201ENST00000449082 KANK1Q14678 1352 aa13.39□□□□□ -0.27
SCN10A-201ENST00000449082 TRHP20396 242 aaPredicted RBP13.39□□□□□ -0.27
SCN10A-201ENST00000449082 ARXQ96QS3 562 aa13.39□□□□□ -0.27
SCN10A-201ENST00000449082 NUDCQ9Y266 331 aa13.39□□□□□ -0.27
SCN10A-201ENST00000449082 MIER1Q8N108 512 aa13.39□□□□□ -0.27
SCN10A-201ENST00000449082 LMOD2Q6P5Q4 547 aa13.38□□□□□ -0.27
SCN10A-201ENST00000449082 HDGFP51858 240 aaKnown RBP13.38□□□□□ -0.27
SCN10A-201ENST00000449082 CARMIL1Q5VZK9 1371 aa13.38□□□□□ -0.27
SCN10A-201ENST00000449082 MAPK8IP3Q9UPT6 1336 aa13.37□□□□□ -0.27
SCN10A-201ENST00000449082 CUX2O14529 1486 aa13.36□□□□□ -0.27
SCN10A-201ENST00000449082 IRX6P78412 446 aaPredicted RBP13.36□□□□□ -0.27
SCN10A-201ENST00000449082 CDK11BP21127 795 aaKnown RBP13.33□□□□□ -0.28
SCN10A-201ENST00000449082 FTSJ3Q8IY81 847 aaKnown RBP13.33□□□□□ -0.28
SCN10A-201ENST00000449082 BECN1Q14457 450 aa13.32□□□□□ -0.28
SCN10A-201ENST00000449082 LAS1LQ9Y4W2 734 aaKnown RBP13.32□□□□□ -0.28
SCN10A-201ENST00000449082 EIF5BO60841 1220 aaKnown RBP13.31□□□□□ -0.28
SCN10A-201ENST00000449082 MLECQ14165 292 aa13.31□□□□□ -0.28
SCN10A-201ENST00000449082 CASC1Q6TDU7 716 aa13.31□□□□□ -0.28
SCN10A-201ENST00000449082 PNNQ9H307 717 aaKnown RBP13.31□□□□□ -0.28
SCN10A-201ENST00000449082 CECR2Q9BXF3 1484 aa13.3□□□□□ -0.28
SCN10A-201ENST00000449082 NCLP19338 710 aaKnown RBP13.3□□□□□ -0.28
SCN10A-201ENST00000449082 NEUROD2Q15784 382 aa13.3□□□□□ -0.28
SCN10A-201ENST00000449082 PDS5BQ9NTI5 1447 aa13.3□□□□□ -0.28
SCN10A-201ENST00000449082 MYO15BQ96JP2 1530 aa13.3□□□□□ -0.28
SCN10A-201ENST00000449082 CARMIL2Q6F5E8 1435 aa13.29□□□□□ -0.28
SCN10A-201ENST00000449082 DDRGK1Q96HY6 314 aa13.29□□□□□ -0.28
SCN10A-201ENST00000449082 TMF1P82094 1093 aa13.28□□□□□ -0.28
SCN10A-201ENST00000449082 NPHP1O15259 732 aa13.27□□□□□ -0.28
SCN10A-201ENST00000449082 SIN3AQ96ST3 1273 aa13.27□□□□□ -0.29
SCN10A-201ENST00000449082 DCAF11Q8TEB1 546 aa13.27□□□□□ -0.29
SCN10A-201ENST00000449082 CHMP4BQ9H444 224 aaKnown RBP13.27□□□□□ -0.29
SCN10A-201ENST00000449082 TNNT2P45379 298 aaPredicted RBP13.26□□□□□ -0.29
SCN10A-201ENST00000449082 NBR1Q14596 966 aa13.26□□□□□ -0.29
SCN10A-201ENST00000449082 SMARCA2P51531 1590 aa13.26□□□□□ -0.29
SCN10A-201ENST00000449082 U2SURPO15042 1029 aaKnown RBP13.25□□□□□ -0.29
SCN10A-201ENST00000449082 CC2D1BQ5T0F9 858 aaKnown RBP13.25□□□□□ -0.29
SCN10A-201ENST00000449082 GOLGA6L22H0YM25 854 aa13.24□□□□□ -0.29
SCN10A-201ENST00000449082 SRPK2P78362 688 aaKnown RBP13.24□□□□□ -0.29
SCN10A-201ENST00000449082 MS4A1P11836 297 aa13.23□□□□□ -0.29
SCN10A-201ENST00000449082 GGT6Q6P531 493 aa13.23□□□□□ -0.29
SCN10A-201ENST00000449082 SENP3-EIF4A1A0A087X0R7 540 aa13.22□□□□□ -0.29
SCN10A-201ENST00000449082 SOGA1O94964 1423 aa13.22□□□□□ -0.29
SCN10A-201ENST00000449082 ARHGAP35Q9NRY4 1499 aa13.22□□□□□ -0.29
SCN10A-201ENST00000449082 ANP32EQ9BTT0 268 aa13.21□□□□□ -0.29
SCN10A-201ENST00000449082 OS9Q13438 667 aaPredicted RBP13.19□□□□□ -0.3
SCN10A-201ENST00000449082 FRAT1Q92837 279 aaPredicted RBP13.19□□□□□ -0.3
SCN10A-201ENST00000449082 ZRSR1Q15695 479 aaKnown RBP13.19□□□□□ -0.3
SCN10A-201ENST00000449082 TIMELESSQ9UNS1 1208 aa13.19□□□□□ -0.3
SCN10A-201ENST00000449082 CCDC88BA6NC98 1476 aa13.19□□□□□ -0.3
SCN10A-201ENST00000449082 EFCAB2Q5VUJ9 269 aa13.18□□□□□ -0.3
SCN10A-201ENST00000449082 MORC1Q86VD1 984 aa13.17□□□□□ -0.3
SCN10A-201ENST00000449082 SUPT16HQ9Y5B9 1047 aaKnown RBP13.17□□□□□ -0.3
SCN10A-201ENST00000449082 SAFB2Q14151 953 aaKnown RBP eCLIP13.16□□□□□ -0.3
SCN10A-201ENST00000449082 SOX12O15370 315 aa13.16□□□□□ -0.3
SCN10A-201ENST00000449082 HDGFL2Q7Z4V5 671 aaPredicted RBP13.16□□□□□ -0.3
SCN10A-201ENST00000449082 SETD5Q9C0A6 1442 aa13.16□□□□□ -0.3
SCN10A-201ENST00000449082 PKD2Q13563 968 aa13.15□□□□□ -0.3
SCN10A-201ENST00000449082 FMN1Q68DA7 1419 aa13.15□□□□□ -0.3
SCN10A-201ENST00000449082 TDRD9Q8NDG6 1382 aaKnown RBP13.15□□□□□ -0.3
SCN10A-201ENST00000449082 GOLGA2Q08379 1002 aa13.15□□□□□ -0.3
SCN10A-201ENST00000449082 STK26Q9P289 416 aa13.14□□□□□ -0.31
SCN10A-201ENST00000449082 MROH2BQ7Z745 1585 aa13.14□□□□□ -0.31
SCN10A-201ENST00000449082 RTF1Q92541 710 aaKnown RBP13.13□□□□□ -0.31
SCN10A-201ENST00000449082 VPS8Q8N3P4 1428 aa13.13□□□□□ -0.31
SCN10A-201ENST00000449082 TRIM44Q96DX7 344 aaPredicted RBP13.12□□□□□ -0.31
SCN10A-201ENST00000449082 ANKRD30AQ9BXX3 1397 aa13.11□□□□□ -0.31
SCN10A-201ENST00000449082 FGD1P98174 961 aa13.11□□□□□ -0.31
SCN10A-201ENST00000449082 PPP4R2Q9NY27 417 aa13.1□□□□□ -0.31
SCN10A-201ENST00000449082 KCNJ4P48050 445 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms