RNA–Protein interactions for RNA: ENST00000448637.5

LPP-208, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 5 BASIC

Gene LPP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-208ENST00000448637 PPP1R15AO75807 674 aaPredicted RBP10.89□□□□□ -0.67
LPP-208ENST00000448637 PABPN1Q86U42 306 aaKnown RBP eCLIP10.89□□□□□ -0.67
LPP-208ENST00000448637 NPHP1O15259 732 aa10.89□□□□□ -0.67
LPP-208ENST00000448637 DNTTIP2Q5QJE6 756 aaKnown RBP10.89□□□□□ -0.67
LPP-208ENST00000448637 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.88□□□□□ -0.67
LPP-208ENST00000448637 L1TD1Q5T7N2 865 aaKnown RBP10.86□□□□□ -0.67
LPP-208ENST00000448637 TSPY4P0CV99 314 aa10.85□□□□□ -0.67
LPP-208ENST00000448637 TSPY10P0CW01 314 aa10.85□□□□□ -0.67
LPP-208ENST00000448637 CFAP53Q96M91 514 aa10.84□□□□□ -0.67
LPP-208ENST00000448637 PLEKHG5O94827 1062 aa10.83□□□□□ -0.67
LPP-208ENST00000448637 NCBP3Q53F19 620 aaKnown RBP10.82□□□□□ -0.68
LPP-208ENST00000448637 MRS2Q9HD23 443 aa10.82□□□□□ -0.68
LPP-208ENST00000448637 CLSTN1O94985 981 aa10.82□□□□□ -0.68
LPP-208ENST00000448637 GOLGA2Q08379 1002 aa10.81□□□□□ -0.68
LPP-208ENST00000448637 DDX10Q13206 875 aaKnown RBP10.8□□□□□ -0.68
LPP-208ENST00000448637 FGD1P98174 961 aa10.8□□□□□ -0.68
LPP-208ENST00000448637 CHMP4BQ9H444 224 aaKnown RBP10.8□□□□□ -0.68
LPP-208ENST00000448637 EIF4G2P78344 907 aaKnown RBP eCLIP10.79□□□□□ -0.68
LPP-208ENST00000448637 KDM2AQ9Y2K7 1162 aa10.78□□□□□ -0.68
LPP-208ENST00000448637 ERICH6BQ5W0A0 696 aa10.78□□□□□ -0.68
LPP-208ENST00000448637 CSRNP3Q8WYN3 585 aa10.78□□□□□ -0.68
LPP-208ENST00000448637 CDCA8Q53HL2 280 aa10.76□□□□□ -0.69
LPP-208ENST00000448637 FTSJ3Q8IY81 847 aaKnown RBP10.76□□□□□ -0.69
LPP-208ENST00000448637 PLCB2Q00722 1185 aa10.75□□□□□ -0.69
LPP-208ENST00000448637 CHAF1AQ13111 956 aaPredicted RBP10.75□□□□□ -0.69
LPP-208ENST00000448637 OS9Q13438 667 aaPredicted RBP10.75□□□□□ -0.69
LPP-208ENST00000448637 TPRNQ4KMQ1 711 aa10.75□□□□□ -0.69
LPP-208ENST00000448637 PNNQ9H307 717 aaKnown RBP10.75□□□□□ -0.69
LPP-208ENST00000448637 KIAA2012Q0VF49 1180 aa10.74□□□□□ -0.69
LPP-208ENST00000448637 GOLGA6L4A6NEF3 574 aa10.74□□□□□ -0.69
LPP-208ENST00000448637 KCNJ4P48050 445 aa10.74□□□□□ -0.69
LPP-208ENST00000448637 PPM1GO15355 546 aaPredicted RBP10.73□□□□□ -0.69
LPP-208ENST00000448637 PRM3Q9NNZ6 103 aa10.73□□□□□ -0.69
LPP-208ENST00000448637 MAPK8IP3Q9UPT6 1336 aa10.73□□□□□ -0.69
LPP-208ENST00000448637 CHIC2Q9UKJ5 165 aa10.72□□□□□ -0.69
LPP-208ENST00000448637 NUDCQ9Y266 331 aa10.72□□□□□ -0.69
LPP-208ENST00000448637 NAP1L2Q9ULW6 460 aaPredicted RBP10.72□□□□□ -0.69
LPP-208ENST00000448637 ARID4BQ4LE39 1312 aaPredicted RBP10.72□□□□□ -0.69
LPP-208ENST00000448637 TAOK2Q9UL54 1235 aa10.72□□□□□ -0.69
LPP-208ENST00000448637 MS4A1P11836 297 aa10.71□□□□□ -0.69
LPP-208ENST00000448637 NAP1L5Q96NT1 182 aaPredicted RBP10.71□□□□□ -0.7
LPP-208ENST00000448637 CCDC180Q9P1Z9 1646 aa10.7□□□□□ -0.7
LPP-208ENST00000448637 ISY1Q9ULR0 285 aaKnown RBP10.7□□□□□ -0.7
LPP-208ENST00000448637 LMOD2Q6P5Q4 547 aa10.69□□□□□ -0.7
LPP-208ENST00000448637 KNSTRNQ9Y448 316 aa10.68□□□□□ -0.7
LPP-208ENST00000448637 HSP90AB1P08238 724 aaKnown RBP10.68□□□□□ -0.7
LPP-208ENST00000448637 NOC3LQ8WTT2 800 aaKnown RBP10.67□□□□□ -0.7
LPP-208ENST00000448637 LAS1LQ9Y4W2 734 aaKnown RBP10.66□□□□□ -0.7
LPP-208ENST00000448637 ABCC9O60706 1549 aa10.66□□□□□ -0.7
LPP-208ENST00000448637 MCCP23508 829 aa10.66□□□□□ -0.7
LPP-208ENST00000448637 CFAP44Q96MT7 982 aa10.66□□□□□ -0.7
LPP-208ENST00000448637 MIER1Q8N108 512 aa10.66□□□□□ -0.7
LPP-208ENST00000448637 TMX4Q9H1E5 349 aaPredicted RBP10.65□□□□□ -0.7
LPP-208ENST00000448637 GNL2Q13823 731 aaKnown RBP10.65□□□□□ -0.71
LPP-208ENST00000448637 DRC7Q8IY82 874 aa10.64□□□□□ -0.71
LPP-208ENST00000448637 MTUS2Q5JR59 1369 aa10.63□□□□□ -0.71
LPP-208ENST00000448637 CHMP7Q8WUX9 453 aaPredicted RBP10.63□□□□□ -0.71
LPP-208ENST00000448637 POGKQ9P215 609 aa10.63□□□□□ -0.71
LPP-208ENST00000448637 SENP3Q9H4L4 574 aaPredicted RBP10.62□□□□□ -0.71
LPP-208ENST00000448637 IRX6P78412 446 aaPredicted RBP10.62□□□□□ -0.71
LPP-208ENST00000448637 MSNP26038 577 aaKnown RBP10.6□□□□□ -0.71
LPP-208ENST00000448637 USP35Q9P2H5 1018 aa10.6□□□□□ -0.71
LPP-208ENST00000448637 HSCBQ8IWL3 235 aa10.59□□□□□ -0.71
LPP-208ENST00000448637 HTATSF1O43719 755 aaKnown RBP10.59□□□□□ -0.71
LPP-208ENST00000448637 CCDC34Q96HJ3 373 aa10.59□□□□□ -0.71
LPP-208ENST00000448637 HDGFP51858 240 aaKnown RBP10.59□□□□□ -0.71
LPP-208ENST00000448637 KRI1Q8N9T8 703 aaKnown RBP10.58□□□□□ -0.72
LPP-208ENST00000448637 A0A0U1RQG5 324 aaPredicted RBP10.58□□□□□ -0.72
LPP-208ENST00000448637 PLEKHD1A6NEE1 506 aa10.58□□□□□ -0.72
LPP-208ENST00000448637 KCNH8Q96L42 1107 aa10.58□□□□□ -0.72
LPP-208ENST00000448637 NEUROD2Q15784 382 aa10.57□□□□□ -0.72
LPP-208ENST00000448637 TPM4P67936 248 aa10.57□□□□□ -0.72
LPP-208ENST00000448637 CEP89Q96ST8 783 aa10.56□□□□□ -0.72
LPP-208ENST00000448637 NOP58Q9Y2X3 529 aaKnown RBP10.56□□□□□ -0.72
LPP-208ENST00000448637 FRAT1Q92837 279 aaPredicted RBP10.56□□□□□ -0.72
LPP-208ENST00000448637 SUPT16HQ9Y5B9 1047 aaKnown RBP10.56□□□□□ -0.72
LPP-208ENST00000448637 RGL3Q3MIN7 710 aa10.55□□□□□ -0.72
LPP-208ENST00000448637 PTMSP20962 102 aa10.55□□□□□ -0.72
LPP-208ENST00000448637 GOLGA6L1Q8N7Z2 621 aa10.55□□□□□ -0.72
LPP-208ENST00000448637 KIAA1211Q6ZU35 1233 aa10.54□□□□□ -0.72
LPP-208ENST00000448637 DEKP35659 375 aaKnown RBP10.54□□□□□ -0.72
LPP-208ENST00000448637 RGS3P49796 1198 aa10.54□□□□□ -0.72
LPP-208ENST00000448637 U2SURPO15042 1029 aaKnown RBP10.53□□□□□ -0.72
LPP-208ENST00000448637 CHMP4AQ9BY43 222 aa10.53□□□□□ -0.72
LPP-208ENST00000448637 TNNT3P45378 269 aaPredicted RBP10.52□□□□□ -0.73
LPP-208ENST00000448637 RTF1Q92541 710 aaKnown RBP10.52□□□□□ -0.73
LPP-208ENST00000448637 RSF1Q96T23 1441 aaPredicted RBP10.51□□□□□ -0.73
LPP-208ENST00000448637 CARD11Q9BXL7 1154 aa10.51□□□□□ -0.73
LPP-208ENST00000448637 RRP7BPQ9NSQ0 103 aa10.51□□□□□ -0.73
LPP-208ENST00000448637 G3V3G9 751 aa10.5□□□□□ -0.73
LPP-208ENST00000448637 DCAF8Q5TAQ9 597 aa10.5□□□□□ -0.73
LPP-208ENST00000448637 RTN4Q9NQC3 1192 aaKnown RBP10.49□□□□□ -0.73
LPP-208ENST00000448637 SYAP1Q96A49 352 aaPredicted RBP10.48□□□□□ -0.73
LPP-208ENST00000448637 AMER1Q5JTC6 1135 aaPredicted RBP10.48□□□□□ -0.73
LPP-208ENST00000448637 HDAC5Q9UQL6 1122 aa10.48□□□□□ -0.73
LPP-208ENST00000448637 PPP4R2Q9NY27 417 aa10.47□□□□□ -0.73
LPP-208ENST00000448637 RASSF8Q8NHQ8 419 aa10.47□□□□□ -0.73
LPP-208ENST00000448637 PDE4CQ08493 712 aa10.46□□□□□ -0.73
LPP-208ENST00000448637 TPM3P06753 285 aa10.46□□□□□ -0.73
LPP-208ENST00000448637 GORABQ5T7V8 394 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms