RNA–Protein interactions for RNA: ENST00000447712.6

FGFR1-214, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FGFR1, Length 5,900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-214ENST00000447712 LMOD2Q6P5Q4 547 aa26.88■■□□□ 1.89
FGFR1-214ENST00000447712 MRS2Q9HD23 443 aa26.88■■□□□ 1.89
FGFR1-214ENST00000447712 RGL3Q3MIN7 710 aa26.87■■□□□ 1.89
FGFR1-214ENST00000447712 HIRIP3Q9BW71 556 aaPredicted RBP26.87■■□□□ 1.89
FGFR1-214ENST00000447712 PPM1GO15355 546 aaPredicted RBP26.85■■□□□ 1.89
FGFR1-214ENST00000447712 ACIN1Q9UKV3 1341 aaKnown RBP26.83■■□□□ 1.89
FGFR1-214ENST00000447712 PLEKHD1A6NEE1 506 aa26.83■■□□□ 1.89
FGFR1-214ENST00000447712 EIF5BO60841 1220 aaKnown RBP26.78■■□□□ 1.88
FGFR1-214ENST00000447712 TULP1O00294 542 aaPredicted RBP26.78■■□□□ 1.88
FGFR1-214ENST00000447712 TRHP20396 242 aaPredicted RBP26.77■■□□□ 1.88
FGFR1-214ENST00000447712 NPHP1O15259 732 aa26.77■■□□□ 1.88
FGFR1-214ENST00000447712 IRX6P78412 446 aaPredicted RBP26.71■■□□□ 1.87
FGFR1-214ENST00000447712 SENP3-EIF4A1A0A087X0R7 540 aa26.69■■□□□ 1.86
FGFR1-214ENST00000447712 NBR1Q14596 966 aa26.65■■□□□ 1.86
FGFR1-214ENST00000447712 EIF4G2P78344 907 aaKnown RBP eCLIP26.63■■□□□ 1.85
FGFR1-214ENST00000447712 LAS1LQ9Y4W2 734 aaKnown RBP26.63■■□□□ 1.85
FGFR1-214ENST00000447712 CFAP53Q96M91 514 aa26.62■■□□□ 1.85
FGFR1-214ENST00000447712 POGKQ9P215 609 aa26.6■■□□□ 1.85
FGFR1-214ENST00000447712 TAOK2Q9UL54 1235 aa26.58■■□□□ 1.85
FGFR1-214ENST00000447712 CFDP1Q9UEE9 299 aaPredicted RBP26.57■■□□□ 1.84
FGFR1-214ENST00000447712 TPRNQ4KMQ1 711 aa26.56■■□□□ 1.84
FGFR1-214ENST00000447712 MLECQ14165 292 aa26.55■■□□□ 1.84
FGFR1-214ENST00000447712 NEUROD2Q15784 382 aa26.55■■□□□ 1.84
FGFR1-214ENST00000447712 KNSTRNQ9Y448 316 aa26.53■■□□□ 1.84
FGFR1-214ENST00000447712 ERCC6Q03468 1493 aa26.51■■□□□ 1.83
FGFR1-214ENST00000447712 NCLP19338 710 aaKnown RBP26.51■■□□□ 1.83
FGFR1-214ENST00000447712 TNNT2P45379 298 aaPredicted RBP26.49■■□□□ 1.83
FGFR1-214ENST00000447712 CLIP1P30622 1438 aa26.48■■□□□ 1.83
FGFR1-214ENST00000447712 RSF1Q96T23 1441 aaPredicted RBP26.48■■□□□ 1.83
FGFR1-214ENST00000447712 MAPK8IP3Q9UPT6 1336 aa26.45■■□□□ 1.82
FGFR1-214ENST00000447712 CDCA8Q53HL2 280 aa26.44■■□□□ 1.82
FGFR1-214ENST00000447712 FTSJ3Q8IY81 847 aaKnown RBP26.44■■□□□ 1.82
FGFR1-214ENST00000447712 CARD11Q9BXL7 1154 aa26.43■■□□□ 1.82
FGFR1-214ENST00000447712 SOX12O15370 315 aa26.43■■□□□ 1.82
FGFR1-214ENST00000447712 ZCCHC6Q5VYS8 1495 aaKnown RBP26.42■■□□□ 1.82
FGFR1-214ENST00000447712 ZRSR1Q15695 479 aaKnown RBP26.4■■□□□ 1.82
FGFR1-214ENST00000447712 CASC1Q6TDU7 716 aa26.38■■□□□ 1.81
FGFR1-214ENST00000447712 OS9Q13438 667 aaPredicted RBP26.36■■□□□ 1.81
FGFR1-214ENST00000447712 NUDCQ9Y266 331 aa26.35■■□□□ 1.81
FGFR1-214ENST00000447712 GOLGA2Q08379 1002 aa26.35■■□□□ 1.81
FGFR1-214ENST00000447712 BECN1Q14457 450 aa26.34■■□□□ 1.81
FGFR1-214ENST00000447712 U2SURPO15042 1029 aaKnown RBP26.33■■□□□ 1.81
FGFR1-214ENST00000447712 GOLGA6L22H0YM25 854 aa26.28■■□□□ 1.8
FGFR1-214ENST00000447712 MIER1Q8N108 512 aa26.28■■□□□ 1.8
FGFR1-214ENST00000447712 FRAT1Q92837 279 aaPredicted RBP26.27■■□□□ 1.8
FGFR1-214ENST00000447712 CC2D1BQ5T0F9 858 aaKnown RBP26.26■■□□□ 1.79
FGFR1-214ENST00000447712 NAP1L2Q9ULW6 460 aaPredicted RBP26.26■■□□□ 1.79
FGFR1-214ENST00000447712 SAFB2Q14151 953 aaKnown RBP eCLIP26.25■■□□□ 1.79
FGFR1-214ENST00000447712 FGD1P98174 961 aa26.23■■□□□ 1.79
FGFR1-214ENST00000447712 NCBP3Q53F19 620 aaKnown RBP26.21■■□□□ 1.79
FGFR1-214ENST00000447712 SRPK2P78362 688 aaKnown RBP26.19■■□□□ 1.78
FGFR1-214ENST00000447712 DDRGK1Q96HY6 314 aa26.19■■□□□ 1.78
FGFR1-214ENST00000447712 HDGFP51858 240 aaKnown RBP26.19■■□□□ 1.78
FGFR1-214ENST00000447712 ISY1Q9ULR0 285 aaKnown RBP26.18■■□□□ 1.78
FGFR1-214ENST00000447712 RB1CC1Q8TDY2 1594 aa26.18■■□□□ 1.78
FGFR1-214ENST00000447712 TRIM44Q96DX7 344 aaPredicted RBP26.18■■□□□ 1.78
FGFR1-214ENST00000447712 PTMAP06454 111 aaKnown RBP26.17■■□□□ 1.78
FGFR1-214ENST00000447712 KCNJ4P48050 445 aa26.17■■□□□ 1.78
FGFR1-214ENST00000447712 BAZ1BQ9UIG0 1483 aaKnown RBP26.15■■□□□ 1.78
FGFR1-214ENST00000447712 CLSTN1O94985 981 aa26.14■■□□□ 1.77
FGFR1-214ENST00000447712 GGT6Q6P531 493 aa26.13■■□□□ 1.77
FGFR1-214ENST00000447712 KANK1Q14678 1352 aa26.12■■□□□ 1.77
FGFR1-214ENST00000447712 GOLGA3Q08378 1498 aa26.12■■□□□ 1.77
FGFR1-214ENST00000447712 STK26Q9P289 416 aa26.11■■□□□ 1.77
FGFR1-214ENST00000447712 PAK3O75914 559 aaPredicted RBP26.11■■□□□ 1.77
FGFR1-214ENST00000447712 GLIPR1L2Q4G1C9 344 aa26.1■■□□□ 1.77
FGFR1-214ENST00000447712 RGS3P49796 1198 aa26.1■■□□□ 1.77
FGFR1-214ENST00000447712 KIF27Q86VH2 1401 aa26.09■■□□□ 1.77
FGFR1-214ENST00000447712 DCAF1Q9Y4B6 1507 aa26.09■■□□□ 1.77
FGFR1-214ENST00000447712 EIF4G1Q04637 1599 aaKnown RBP26.09■■□□□ 1.77
FGFR1-214ENST00000447712 CCNB3Q8WWL7 1395 aa26.08■■□□□ 1.77
FGFR1-214ENST00000447712 ZNF330Q9Y3S2 320 aaPredicted RBP26.08■■□□□ 1.77
FGFR1-214ENST00000447712 DCAF11Q8TEB1 546 aa26.08■■□□□ 1.77
FGFR1-214ENST00000447712 PLCB2Q00722 1185 aa26.07■■□□□ 1.76
FGFR1-214ENST00000447712 CCDC9Q9Y3X0 531 aaKnown RBP26.07■■□□□ 1.76
FGFR1-214ENST00000447712 CSB-PGBD3P0DP91 1061 aa26.06■■□□□ 1.76
FGFR1-214ENST00000447712 PNNQ9H307 717 aaKnown RBP26.06■■□□□ 1.76
FGFR1-214ENST00000447712 WRNQ14191 1432 aaPredicted RBP eCLIP26.04■■□□□ 1.76
FGFR1-214ENST00000447712 SIN3AQ96ST3 1273 aa26.04■■□□□ 1.76
FGFR1-214ENST00000447712 CEP162Q5TB80 1403 aa26.04■■□□□ 1.76
FGFR1-214ENST00000447712 DNTTIP2Q5QJE6 756 aaKnown RBP26.02■■□□□ 1.76
FGFR1-214ENST00000447712 SUPT16HQ9Y5B9 1047 aaKnown RBP26.01■■□□□ 1.75
FGFR1-214ENST00000447712 TMF1P82094 1093 aa26■■□□□ 1.75
FGFR1-214ENST00000447712 RTF1Q92541 710 aaKnown RBP26■■□□□ 1.75
FGFR1-214ENST00000447712 ANP32EQ9BTT0 268 aa25.98■■□□□ 1.75
FGFR1-214ENST00000447712 CHMP4BQ9H444 224 aaKnown RBP25.98■■□□□ 1.75
FGFR1-214ENST00000447712 MORC1Q86VD1 984 aa25.97■■□□□ 1.75
FGFR1-214ENST00000447712 HSP90AB1P08238 724 aaKnown RBP25.94■■□□□ 1.74
FGFR1-214ENST00000447712 MS4A1P11836 297 aa25.91■■□□□ 1.74
FGFR1-214ENST00000447712 EEA1Q15075 1411 aa25.89■■□□□ 1.73
FGFR1-214ENST00000447712 APBB1O00213 710 aa25.88■■□□□ 1.73
FGFR1-214ENST00000447712 TMX4Q9H1E5 349 aaPredicted RBP25.88■■□□□ 1.73
FGFR1-214ENST00000447712 HDGFL2Q7Z4V5 671 aaPredicted RBP25.87■■□□□ 1.73
FGFR1-214ENST00000447712 GOLGA6L4A6NEF3 574 aa25.85■■□□□ 1.73
FGFR1-214ENST00000447712 GOLGA6L6A8MZA4 724 aa25.84■■□□□ 1.73
FGFR1-214ENST00000447712 GNL2Q13823 731 aaKnown RBP25.79■■□□□ 1.72
FGFR1-214ENST00000447712 CEP164Q9UPV0 1460 aa25.78■■□□□ 1.72
FGFR1-214ENST00000447712 MCCP23508 829 aa25.75■■□□□ 1.71
FGFR1-214ENST00000447712 NUTM2DQ5VT03 806 aaPredicted RBP25.74■■□□□ 1.71
FGFR1-214ENST00000447712 CHMP3Q9Y3E7 222 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms