RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 CHRM1P11229 460 aaPredicted RBP10.56□□□□□ -0.72
HMGB1P16-201ENST00000447155 HAP1P54257 671 aaPredicted RBP10.56□□□□□ -0.72
HMGB1P16-201ENST00000447155 RNF25Q96BH1 459 aaPredicted RBP10.56□□□□□ -0.72
HMGB1P16-201ENST00000447155 TAOK2Q9UL54 1235 aa10.56□□□□□ -0.72
HMGB1P16-201ENST00000447155 RIOK3O14730 519 aaKnown RBP10.54□□□□□ -0.72
HMGB1P16-201ENST00000447155 FARP1Q9Y4F1 1045 aaPredicted RBP10.53□□□□□ -0.72
HMGB1P16-201ENST00000447155 PRKAR2AP13861 404 aaKnown RBP10.52□□□□□ -0.73
HMGB1P16-201ENST00000447155 FXR2P51116 673 aaKnown RBP eCLIP10.52□□□□□ -0.73
HMGB1P16-201ENST00000447155 PAXIP1Q6ZW49 1069 aaPredicted RBP10.52□□□□□ -0.73
HMGB1P16-201ENST00000447155 HS6ST3Q8IZP7 471 aa10.52□□□□□ -0.73
HMGB1P16-201ENST00000447155 SPRYD3Q8NCJ5 442 aa10.49□□□□□ -0.73
HMGB1P16-201ENST00000447155 CFAP44Q96MT7 982 aa10.49□□□□□ -0.73
HMGB1P16-201ENST00000447155 VGFO15240 615 aaPredicted RBP10.48□□□□□ -0.73
HMGB1P16-201ENST00000447155 PYGBP11216 843 aa10.47□□□□□ -0.73
HMGB1P16-201ENST00000447155 CHRDL2Q6WN34 429 aa10.47□□□□□ -0.73
HMGB1P16-201ENST00000447155 DNAJC5Q9H3Z4 198 aa10.47□□□□□ -0.73
HMGB1P16-201ENST00000447155 VSIG10Q8N0Z9 540 aa10.45□□□□□ -0.74
HMGB1P16-201ENST00000447155 TSPYL2Q9H2G4 693 aaPredicted RBP10.45□□□□□ -0.74
HMGB1P16-201ENST00000447155 SGIP1Q9BQI5 828 aa10.43□□□□□ -0.74
HMGB1P16-201ENST00000447155 PIP4P2Q8N4L2 257 aa10.42□□□□□ -0.74
HMGB1P16-201ENST00000447155 STK25O00506 426 aa10.41□□□□□ -0.74
HMGB1P16-201ENST00000447155 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.38□□□□□ -0.75
HMGB1P16-201ENST00000447155 ZFP91Q96JP5 570 aaPredicted RBP10.38□□□□□ -0.75
HMGB1P16-201ENST00000447155 PAK3O75914 559 aaPredicted RBP10.37□□□□□ -0.75
HMGB1P16-201ENST00000447155 ZNF467Q7Z7K2 595 aaPredicted RBP10.37□□□□□ -0.75
HMGB1P16-201ENST00000447155 CCDC61Q9Y6R9 512 aa10.37□□□□□ -0.75
HMGB1P16-201ENST00000447155 NKX1-1Q15270 411 aaPredicted RBP10.35□□□□□ -0.75
HMGB1P16-201ENST00000447155 BCL11BQ9C0K0 894 aaPredicted RBP10.35□□□□□ -0.75
HMGB1P16-201ENST00000447155 STK24Q9Y6E0 443 aa10.34□□□□□ -0.75
HMGB1P16-201ENST00000447155 TSHZ2Q9NRE2 1034 aa10.33□□□□□ -0.76
HMGB1P16-201ENST00000447155 POTEHQ6S545 545 aa10.31□□□□□ -0.76
HMGB1P16-201ENST00000447155 GTPBP6O43824 516 aaPredicted RBP10.3□□□□□ -0.76
HMGB1P16-201ENST00000447155 PDAP1Q13442 181 aaKnown RBP10.3□□□□□ -0.76
HMGB1P16-201ENST00000447155 ZNF579Q8NAF0 562 aaKnown RBP10.3□□□□□ -0.76
HMGB1P16-201ENST00000447155 KDM2AQ9Y2K7 1162 aa10.3□□□□□ -0.76
HMGB1P16-201ENST00000447155 RYDENQ9NUL5 291 aaKnown RBP10.29□□□□□ -0.76
HMGB1P16-201ENST00000447155 PCDHB8Q9UN66 801 aa10.28□□□□□ -0.76
HMGB1P16-201ENST00000447155 PCDHB13Q9Y5F0 798 aa10.28□□□□□ -0.76
HMGB1P16-201ENST00000447155 KIF12Q96FN5 646 aa10.25□□□□□ -0.77
HMGB1P16-201ENST00000447155 CD44P16070 742 aaKnown RBP10.24□□□□□ -0.77
HMGB1P16-201ENST00000447155 PSEN1P49768 467 aa10.24□□□□□ -0.77
HMGB1P16-201ENST00000447155 MAP3K13O43283 966 aa10.23□□□□□ -0.77
HMGB1P16-201ENST00000447155 ZRANB1Q9UGI0 708 aa10.23□□□□□ -0.77
HMGB1P16-201ENST00000447155 IFNL1Q8IU54 200 aa10.22□□□□□ -0.77
HMGB1P16-201ENST00000447155 BCANQ96GW7 911 aa10.22□□□□□ -0.77
HMGB1P16-201ENST00000447155 PHF12Q96QT6 1004 aa10.16□□□□□ -0.78
HMGB1P16-201ENST00000447155 C19orf67A6NJJ6 358 aa10.15□□□□□ -0.78
HMGB1P16-201ENST00000447155 MFRPQ9BY79 579 aa10.1□□□□□ -0.79
HMGB1P16-201ENST00000447155 CABP2Q9NPB3 220 aa10.1□□□□□ -0.79
HMGB1P16-201ENST00000447155 SOX12O15370 315 aa10.08□□□□□ -0.8
HMGB1P16-201ENST00000447155 EFCAB3Q8N7B9 438 aa10.08□□□□□ -0.8
HMGB1P16-201ENST00000447155 NLRP6P59044 892 aa10.07□□□□□ -0.8
HMGB1P16-201ENST00000447155 MS4A3Q96HJ5 214 aa10.06□□□□□ -0.8
HMGB1P16-201ENST00000447155 FBXO22Q8NEZ5 403 aa10.04□□□□□ -0.8
HMGB1P16-201ENST00000447155 TMEM106CQ9BVX2 250 aa10.03□□□□□ -0.8
HMGB1P16-201ENST00000447155 PHF8Q9UPP1 1060 aa10.02□□□□□ -0.81
HMGB1P16-201ENST00000447155 GOLGA2Q08379 1002 aa10.01□□□□□ -0.81
HMGB1P16-201ENST00000447155 NBR1Q14596 966 aa10□□□□□ -0.81
HMGB1P16-201ENST00000447155 TRPC6Q9Y210 931 aa10□□□□□ -0.81
HMGB1P16-201ENST00000447155 TIE1P35590 1138 aa9.99□□□□□ -0.81
HMGB1P16-201ENST00000447155 HAX1O00165 279 aa9.98□□□□□ -0.81
HMGB1P16-201ENST00000447155 CLCN6P51797 869 aa9.98□□□□□ -0.81
HMGB1P16-201ENST00000447155 CADPS2Q86UW7 1296 aa9.98□□□□□ -0.81
HMGB1P16-201ENST00000447155 PPP1R37O75864 691 aa9.97□□□□□ -0.81
HMGB1P16-201ENST00000447155 TTLL13PA6NNM8 815 aa9.95□□□□□ -0.82
HMGB1P16-201ENST00000447155 MKRN3Q13064 507 aaKnown RBP9.95□□□□□ -0.82
HMGB1P16-201ENST00000447155 WDR70Q9NW82 654 aa9.95□□□□□ -0.82
HMGB1P16-201ENST00000447155 MS4A4AQ96JQ5 239 aa9.94□□□□□ -0.82
HMGB1P16-201ENST00000447155 P3H3Q8IVL6 736 aa9.93□□□□□ -0.82
HMGB1P16-201ENST00000447155 GALR2O43603 387 aaPredicted RBP9.92□□□□□ -0.82
HMGB1P16-201ENST00000447155 BMP2KQ9NSY1 1161 aaPredicted RBP9.92□□□□□ -0.82
HMGB1P16-201ENST00000447155 EVX2Q03828 476 aa9.9□□□□□ -0.82
HMGB1P16-201ENST00000447155 ILDR1Q86SU0 546 aaPredicted RBP9.87□□□□□ -0.83
HMGB1P16-201ENST00000447155 TRIM35Q9UPQ4 493 aa9.87□□□□□ -0.83
HMGB1P16-201ENST00000447155 PRKCSHP14314 528 aaPredicted RBP9.86□□□□□ -0.83
HMGB1P16-201ENST00000447155 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.86□□□□□ -0.83
HMGB1P16-201ENST00000447155 TPRNQ4KMQ1 711 aa9.85□□□□□ -0.83
HMGB1P16-201ENST00000447155 KCNV2Q8TDN2 545 aa9.84□□□□□ -0.83
HMGB1P16-201ENST00000447155 PDE4AP27815 886 aa9.83□□□□□ -0.84
HMGB1P16-201ENST00000447155 NCKAP5LQ9HCH0 1330 aa9.82□□□□□ -0.84
HMGB1P16-201ENST00000447155 ATMINO43313 823 aaPredicted RBP9.81□□□□□ -0.84
HMGB1P16-201ENST00000447155 ATN1P54259 1190 aaPredicted RBP9.81□□□□□ -0.84
HMGB1P16-201ENST00000447155 E2F4Q16254 413 aa9.8□□□□□ -0.84
HMGB1P16-201ENST00000447155 ASTLQ6HA08 431 aaPredicted RBP9.8□□□□□ -0.84
HMGB1P16-201ENST00000447155 LARP6Q9BRS8 491 aaKnown RBP9.8□□□□□ -0.84
HMGB1P16-201ENST00000447155 CRISPLD2Q9H0B8 497 aa9.8□□□□□ -0.84
HMGB1P16-201ENST00000447155 MFSD10Q14728 455 aa9.79□□□□□ -0.84
HMGB1P16-201ENST00000447155 IER5LQ5T953 404 aa9.78□□□□□ -0.84
HMGB1P16-201ENST00000447155 ARHGEF1Q92888 912 aaKnown RBP9.78□□□□□ -0.84
HMGB1P16-201ENST00000447155 GABBR2O75899 941 aa9.76□□□□□ -0.85
HMGB1P16-201ENST00000447155 IRX5P78411 483 aaPredicted RBP9.75□□□□□ -0.85
HMGB1P16-201ENST00000447155 PDCD7Q8N8D1 485 aaKnown RBP9.75□□□□□ -0.85
HMGB1P16-201ENST00000447155 DDX27Q96GQ7 796 aaKnown RBP9.75□□□□□ -0.85
HMGB1P16-201ENST00000447155 DPY19L2Q6NUT2 758 aa9.74□□□□□ -0.85
HMGB1P16-201ENST00000447155 OCEL1Q9H607 264 aa9.74□□□□□ -0.85
HMGB1P16-201ENST00000447155 MICALL2Q8IY33 904 aa9.73□□□□□ -0.85
HMGB1P16-201ENST00000447155 DCBLD2Q96PD2 775 aa9.7□□□□□ -0.86
HMGB1P16-201ENST00000447155 GPHNQ9NQX3 736 aaPredicted RBP9.7□□□□□ -0.86
HMGB1P16-201ENST00000447155 PLCG2P16885 1265 aa9.69□□□□□ -0.86
HMGB1P16-201ENST00000447155 CAMK2BQ13554 666 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms