RNA–Protein interactions for RNA: ENST00000447132.5

NIFK-203, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-203ENST00000447132 GABBR2O75899 941 aa12.4□□□□□ -0.42
NIFK-203ENST00000447132 FAM212AQ96EL1 285 aa12.39□□□□□ -0.43
NIFK-203ENST00000447132 CCDC61Q9Y6R9 512 aa12.39□□□□□ -0.43
NIFK-203ENST00000447132 DCAF8Q5TAQ9 597 aa12.36□□□□□ -0.43
NIFK-203ENST00000447132 PHF12Q96QT6 1004 aa12.34□□□□□ -0.43
NIFK-203ENST00000447132 GSE1Q14687 1217 aa12.33□□□□□ -0.44
NIFK-203ENST00000447132 KIF12Q96FN5 646 aa12.29□□□□□ -0.44
NIFK-203ENST00000447132 SGIP1Q9BQI5 828 aa12.25□□□□□ -0.45
NIFK-203ENST00000447132 GALR2O43603 387 aaPredicted RBP12.24□□□□□ -0.45
NIFK-203ENST00000447132 MAP3K13O43283 966 aa12.23□□□□□ -0.45
NIFK-203ENST00000447132 CHRM1P11229 460 aaPredicted RBP12.22□□□□□ -0.45
NIFK-203ENST00000447132 CIZ1Q9ULV3 898 aaPredicted RBP12.22□□□□□ -0.45
NIFK-203ENST00000447132 MS4A3Q96HJ5 214 aa12.21□□□□□ -0.45
NIFK-203ENST00000447132 PYGBP11216 843 aa12.18□□□□□ -0.46
NIFK-203ENST00000447132 DCBLD2Q96PD2 775 aa12.17□□□□□ -0.46
NIFK-203ENST00000447132 PCDHB13Q9Y5F0 798 aa12.17□□□□□ -0.46
NIFK-203ENST00000447132 TRIM41Q8WV44 630 aa12.16□□□□□ -0.46
NIFK-203ENST00000447132 POTEIP0CG38 1075 aa12.12□□□□□ -0.47
NIFK-203ENST00000447132 IFNL1Q8IU54 200 aa12.11□□□□□ -0.47
NIFK-203ENST00000447132 TIE1P35590 1138 aa12.08□□□□□ -0.48
NIFK-203ENST00000447132 ASTLQ6HA08 431 aaPredicted RBP12.07□□□□□ -0.48
NIFK-203ENST00000447132 ZNF467Q7Z7K2 595 aaPredicted RBP12.07□□□□□ -0.48
NIFK-203ENST00000447132 TRPC6Q9Y210 931 aa12.05□□□□□ -0.48
NIFK-203ENST00000447132 ATMINO43313 823 aaPredicted RBP12.04□□□□□ -0.48
NIFK-203ENST00000447132 PCDHB8Q9UN66 801 aa12.04□□□□□ -0.48
NIFK-203ENST00000447132 BMP2KQ9NSY1 1161 aaPredicted RBP12.02□□□□□ -0.49
NIFK-203ENST00000447132 PKD2Q13563 968 aa12□□□□□ -0.49
NIFK-203ENST00000447132 TTLL13PA6NNM8 815 aa11.98□□□□□ -0.49
NIFK-203ENST00000447132 ATN1P54259 1190 aaPredicted RBP11.98□□□□□ -0.49
NIFK-203ENST00000447132 PELP1Q8IZL8 1130 aaKnown RBP11.97□□□□□ -0.49
NIFK-203ENST00000447132 ECM2O94769 699 aaPredicted RBP11.96□□□□□ -0.49
NIFK-203ENST00000447132 TMEM106CQ9BVX2 250 aa11.96□□□□□ -0.49
NIFK-203ENST00000447132 PDAP1Q13442 181 aaKnown RBP11.94□□□□□ -0.5
NIFK-203ENST00000447132 PSEN1P49768 467 aa11.93□□□□□ -0.5
NIFK-203ENST00000447132 SLC39A7Q92504 469 aa11.93□□□□□ -0.5
NIFK-203ENST00000447132 RIOK3O14730 519 aaKnown RBP11.92□□□□□ -0.5
NIFK-203ENST00000447132 C7P10643 843 aa11.92□□□□□ -0.5
NIFK-203ENST00000447132 RNF25Q96BH1 459 aaPredicted RBP11.91□□□□□ -0.5
NIFK-203ENST00000447132 TRIM35Q9UPQ4 493 aa11.9□□□□□ -0.5
NIFK-203ENST00000447132 TAOK2Q9UL54 1235 aa11.88□□□□□ -0.51
NIFK-203ENST00000447132 VGFO15240 615 aaPredicted RBP11.87□□□□□ -0.51
NIFK-203ENST00000447132 IER5LQ5T953 404 aa11.87□□□□□ -0.51
NIFK-203ENST00000447132 METRNQ9UJH8 293 aa11.85□□□□□ -0.51
NIFK-203ENST00000447132 RGL2O15211 777 aa11.83□□□□□ -0.52
NIFK-203ENST00000447132 LHX8Q68G74 356 aa11.81□□□□□ -0.52
NIFK-203ENST00000447132 GOLGA2Q08379 1002 aa11.8□□□□□ -0.52
NIFK-203ENST00000447132 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.79□□□□□ -0.52
NIFK-203ENST00000447132 ZFP91Q96JP5 570 aaPredicted RBP11.79□□□□□ -0.52
NIFK-203ENST00000447132 POTEFA5A3E0 1075 aa11.77□□□□□ -0.53
NIFK-203ENST00000447132 SEC24BO95487 1268 aa11.77□□□□□ -0.53
NIFK-203ENST00000447132 MKRN3Q13064 507 aaKnown RBP11.77□□□□□ -0.53
NIFK-203ENST00000447132 CABP2Q9NPB3 220 aa11.76□□□□□ -0.53
NIFK-203ENST00000447132 IRX5P78411 483 aaPredicted RBP11.75□□□□□ -0.53
NIFK-203ENST00000447132 AMER1Q5JTC6 1135 aaPredicted RBP11.75□□□□□ -0.53
NIFK-203ENST00000447132 OCEL1Q9H607 264 aa11.74□□□□□ -0.53
NIFK-203ENST00000447132 COLQQ9Y215 455 aaPredicted RBP11.74□□□□□ -0.53
NIFK-203ENST00000447132 POTEB2H3BUK9 544 aa11.73□□□□□ -0.53
NIFK-203ENST00000447132 PLCG2P16885 1265 aa11.71□□□□□ -0.53
NIFK-203ENST00000447132 BCL11BQ9C0K0 894 aaPredicted RBP11.7□□□□□ -0.54
NIFK-203ENST00000447132 STK25O00506 426 aa11.69□□□□□ -0.54
NIFK-203ENST00000447132 ILDR1Q86SU0 546 aaPredicted RBP11.69□□□□□ -0.54
NIFK-203ENST00000447132 EFCAB3Q8N7B9 438 aa11.69□□□□□ -0.54
NIFK-203ENST00000447132 SOX12O15370 315 aa11.68□□□□□ -0.54
NIFK-203ENST00000447132 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.68□□□□□ -0.546e-7■■■■□ 19.4
NIFK-203ENST00000447132 STK24Q9Y6E0 443 aa11.68□□□□□ -0.54
NIFK-203ENST00000447132 POTEJP0CG39 1038 aa11.64□□□□□ -0.55
NIFK-203ENST00000447132 MAMSTRQ6ZN01 415 aa11.64□□□□□ -0.55
NIFK-203ENST00000447132 PDCD7Q8N8D1 485 aaKnown RBP11.64□□□□□ -0.55
NIFK-203ENST00000447132 RTN4Q9NQC3 1192 aaKnown RBP11.64□□□□□ -0.55
NIFK-203ENST00000447132 HS6ST3Q8IZP7 471 aa11.62□□□□□ -0.55
NIFK-203ENST00000447132 OTUD5Q96G74 571 aa11.6□□□□□ -0.55
NIFK-203ENST00000447132 L3MBTL3Q96JM7 780 aaPredicted RBP11.59□□□□□ -0.55
NIFK-203ENST00000447132 CHGAP10645 457 aaKnown RBP11.58□□□□□ -0.56
NIFK-203ENST00000447132 DNAJC5Q9H3Z4 198 aa11.57□□□□□ -0.56
NIFK-203ENST00000447132 SCUBE2Q9NQ36 999 aa11.57□□□□□ -0.56
NIFK-203ENST00000447132 NLRP6P59044 892 aa11.56□□□□□ -0.56
NIFK-203ENST00000447132 DPY19L2Q6NUT2 758 aa11.55□□□□□ -0.56
NIFK-203ENST00000447132 PHF8Q9UPP1 1060 aa11.55□□□□□ -0.56
NIFK-203ENST00000447132 FBXO22Q8NEZ5 403 aa11.53□□□□□ -0.56
NIFK-203ENST00000447132 MFRPQ9BY79 579 aa11.53□□□□□ -0.56
NIFK-203ENST00000447132 DCAF8L2P0C7V8 631 aa11.52□□□□□ -0.57
NIFK-203ENST00000447132 MS4A4AQ96JQ5 239 aa11.51□□□□□ -0.57
NIFK-203ENST00000447132 BOLA1Q9Y3E2 137 aa11.49□□□□□ -0.57
NIFK-203ENST00000447132 G3V3G9 751 aa11.47□□□□□ -0.57
NIFK-203ENST00000447132 TMEM121BQ9BXQ6 578 aaPredicted RBP11.47□□□□□ -0.57
NIFK-203ENST00000447132 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.47□□□□□ -0.57
NIFK-203ENST00000447132 NKX1-1Q15270 411 aaPredicted RBP11.43□□□□□ -0.58
NIFK-203ENST00000447132 C3orf67Q6ZVT6 689 aa11.43□□□□□ -0.58
NIFK-203ENST00000447132 RYDENQ9NUL5 291 aaKnown RBP11.42□□□□□ -0.58
NIFK-203ENST00000447132 SLAIN1Q8ND83 568 aa11.41□□□□□ -0.58
NIFK-203ENST00000447132 MICALL2Q8IY33 904 aa11.4□□□□□ -0.58
NIFK-203ENST00000447132 BBXQ8WY36 941 aaPredicted RBP11.36□□□□□ -0.59
NIFK-203ENST00000447132 PPP1R37O75864 691 aa11.35□□□□□ -0.59
NIFK-203ENST00000447132 GTPBP6O43824 516 aaPredicted RBP11.33□□□□□ -0.6
NIFK-203ENST00000447132 SNPHO15079 494 aa11.29□□□□□ -0.6
NIFK-203ENST00000447132 TMEM92Q6UXU6 159 aa11.27□□□□□ -0.61
NIFK-203ENST00000447132 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.26□□□□□ -0.61
NIFK-203ENST00000447132 FAM163AQ96GL9 167 aaPredicted RBP11.23□□□□□ -0.61
NIFK-203ENST00000447132 KIF3CO14782 793 aa11.21□□□□□ -0.61
NIFK-203ENST00000447132 SPRYD3Q8NCJ5 442 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms