RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 TMEM132AQ24JP5 1023 aa12.14□□□□□ -0.47
MCF2L2-203ENST00000447025 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.13□□□□□ -0.47
MCF2L2-203ENST00000447025 FANCIQ9NVI1 1328 aa12.11□□□□□ -0.47
MCF2L2-203ENST00000447025 IPO4Q8TEX9 1081 aaKnown RBP12.11□□□□□ -0.47
MCF2L2-203ENST00000447025 PLCB2Q00722 1185 aa12.09□□□□□ -0.47
MCF2L2-203ENST00000447025 IRX6P78412 446 aaPredicted RBP12.06□□□□□ -0.48
MCF2L2-203ENST00000447025 CHRM1P11229 460 aaPredicted RBP12.05□□□□□ -0.48
MCF2L2-203ENST00000447025 ZCCHC6Q5VYS8 1495 aaKnown RBP12.05□□□□□ -0.48
MCF2L2-203ENST00000447025 ZFP91Q96JP5 570 aaPredicted RBP12.05□□□□□ -0.48
MCF2L2-203ENST00000447025 TEX2Q8IWB9 1127 aa12.04□□□□□ -0.48
MCF2L2-203ENST00000447025 SLC4A1APQ9BWU0 796 aaKnown RBP12.03□□□□□ -0.48
MCF2L2-203ENST00000447025 CHMP4BQ9H444 224 aaKnown RBP12.03□□□□□ -0.48
MCF2L2-203ENST00000447025 BBXQ8WY36 941 aaPredicted RBP12□□□□□ -0.49
MCF2L2-203ENST00000447025 C11orf95C9JLR9 678 aaPredicted RBP11.99□□□□□ -0.49
MCF2L2-203ENST00000447025 SHROOM4Q9ULL8 1493 aa11.98□□□□□ -0.49
MCF2L2-203ENST00000447025 GTF2E1P29083 439 aaPredicted RBP11.97□□□□□ -0.49
MCF2L2-203ENST00000447025 IGSF3O75054 1194 aa11.96□□□□□ -0.49
MCF2L2-203ENST00000447025 POLR3GLQ9BT43 218 aa11.96□□□□□ -0.5
MCF2L2-203ENST00000447025 HMGB1P09429 215 aaKnown RBP11.95□□□□□ -0.5
MCF2L2-203ENST00000447025 FTSJ3Q8IY81 847 aaKnown RBP11.95□□□□□ -0.5
MCF2L2-203ENST00000447025 SECISBP2LQ93073 1101 aaKnown RBP11.95□□□□□ -0.5
MCF2L2-203ENST00000447025 UBTFP17480 764 aaKnown RBP11.94□□□□□ -0.5
MCF2L2-203ENST00000447025 YTHDC1Q96MU7 727 aaKnown RBP11.94□□□□□ -0.5
MCF2L2-203ENST00000447025 CCDC9Q9Y3X0 531 aaKnown RBP11.94□□□□□ -0.5
MCF2L2-203ENST00000447025 NACADO15069 1562 aa11.93□□□□□ -0.5
MCF2L2-203ENST00000447025 NCLP19338 710 aaKnown RBP11.93□□□□□ -0.5
MCF2L2-203ENST00000447025 RRP9O43818 475 aaKnown RBP11.92□□□□□ -0.5
MCF2L2-203ENST00000447025 SUPT5HO00267 1087 aaKnown RBP11.91□□□□□ -0.5
MCF2L2-203ENST00000447025 PPP6R1Q9UPN7 881 aa11.91□□□□□ -0.5
MCF2L2-203ENST00000447025 TICAM2Q86XR7 235 aa11.9□□□□□ -0.51
MCF2L2-203ENST00000447025 RNF216Q9NWF9 866 aaPredicted RBP11.9□□□□□ -0.51
MCF2L2-203ENST00000447025 CANXP27824 592 aaKnown RBP11.89□□□□□ -0.51
MCF2L2-203ENST00000447025 CNPY4Q8N129 248 aa11.88□□□□□ -0.51
MCF2L2-203ENST00000447025 TRIM41Q8WV44 630 aa11.88□□□□□ -0.51
MCF2L2-203ENST00000447025 STAC3Q96MF2 364 aa11.88□□□□□ -0.51
MCF2L2-203ENST00000447025 PRDM4Q9UKN5 801 aa11.87□□□□□ -0.51
MCF2L2-203ENST00000447025 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.86□□□□□ -0.51
MCF2L2-203ENST00000447025 CCER1Q8TC90 406 aaPredicted RBP11.85□□□□□ -0.51
MCF2L2-203ENST00000447025 HSP90AA2PQ14568 343 aaPredicted RBP11.85□□□□□ -0.51
MCF2L2-203ENST00000447025 CNGB1Q14028 1251 aaPredicted RBP11.84□□□□□ -0.51
MCF2L2-203ENST00000447025 BRPF3Q9ULD4 1205 aa11.83□□□□□ -0.52
MCF2L2-203ENST00000447025 CALD1Q05682 793 aaKnown RBP11.83□□□□□ -0.52
MCF2L2-203ENST00000447025 ARID4BQ4LE39 1312 aaPredicted RBP11.81□□□□□ -0.52
MCF2L2-203ENST00000447025 CUX2O14529 1486 aa11.81□□□□□ -0.52
MCF2L2-203ENST00000447025 PUS7Q96PZ0 661 aaKnown RBP11.8□□□□□ -0.52
MCF2L2-203ENST00000447025 CFAP44Q96MT7 982 aa11.79□□□□□ -0.52
MCF2L2-203ENST00000447025 PRDM10Q9NQV6 1147 aa11.79□□□□□ -0.52
MCF2L2-203ENST00000447025 KCNG1Q9UIX4 513 aa11.78□□□□□ -0.52
MCF2L2-203ENST00000447025 CECR2Q9BXF3 1484 aa11.78□□□□□ -0.52
MCF2L2-203ENST00000447025 WASHC2CQ9Y4E1 1318 aa11.77□□□□□ -0.53
MCF2L2-203ENST00000447025 CLSTN1O94985 981 aa11.77□□□□□ -0.53
MCF2L2-203ENST00000447025 RTL5Q5HYW3 569 aaPredicted RBP11.77□□□□□ -0.53
MCF2L2-203ENST00000447025 WWC1Q8IX03 1113 aa11.75□□□□□ -0.53
MCF2L2-203ENST00000447025 ZNF592Q92610 1267 aa11.75□□□□□ -0.53
MCF2L2-203ENST00000447025 ARID3AQ99856 593 aa11.75□□□□□ -0.53
MCF2L2-203ENST00000447025 CENPJQ9HC77 1338 aaPredicted RBP11.74□□□□□ -0.53
MCF2L2-203ENST00000447025 GRIPAP1Q4V328 841 aa11.74□□□□□ -0.53
MCF2L2-203ENST00000447025 FAM43AQ8N2R8 423 aa11.73□□□□□ -0.53
MCF2L2-203ENST00000447025 VGFO15240 615 aaPredicted RBP11.71□□□□□ -0.54
MCF2L2-203ENST00000447025 FOXD1Q16676 465 aa11.71□□□□□ -0.54
MCF2L2-203ENST00000447025 NBR1Q14596 966 aa11.7□□□□□ -0.54
MCF2L2-203ENST00000447025 WASHC2AQ641Q2 1341 aa11.7□□□□□ -0.54
MCF2L2-203ENST00000447025 PPM1GO15355 546 aaPredicted RBP11.7□□□□□ -0.54
MCF2L2-203ENST00000447025 BICRAQ9NZM4 1560 aa11.69□□□□□ -0.54
MCF2L2-203ENST00000447025 RGS3P49796 1198 aa11.69□□□□□ -0.54
MCF2L2-203ENST00000447025 TMED8Q6PL24 325 aaPredicted RBP11.69□□□□□ -0.54
MCF2L2-203ENST00000447025 MIER1Q8N108 512 aa11.67□□□□□ -0.54
MCF2L2-203ENST00000447025 PLCD4Q9BRC7 762 aa11.67□□□□□ -0.54
MCF2L2-203ENST00000447025 NOP58Q9Y2X3 529 aaKnown RBP11.67□□□□□ -0.54
MCF2L2-203ENST00000447025 CC2D2AQ9P2K1 1620 aa11.66□□□□□ -0.54
MCF2L2-203ENST00000447025 SCRIBQ14160 1630 aa11.66□□□□□ -0.54
MCF2L2-203ENST00000447025 PTMAP06454 111 aaKnown RBP11.65□□□□□ -0.54
MCF2L2-203ENST00000447025 HSP90AA1P07900 732 aaKnown RBP11.65□□□□□ -0.54
MCF2L2-203ENST00000447025 RGS22Q8NE09 1264 aa11.65□□□□□ -0.54
MCF2L2-203ENST00000447025 ZNF830Q96NB3 372 aaPredicted RBP11.64□□□□□ -0.55
MCF2L2-203ENST00000447025 UNC13AQ9UPW8 1703 aa11.64□□□□□ -0.55
MCF2L2-203ENST00000447025 ZNF316A6NFI3 1004 aaPredicted RBP11.64□□□□□ -0.55
MCF2L2-203ENST00000447025 ZBTB22O15209 634 aa11.64□□□□□ -0.55
MCF2L2-203ENST00000447025 MCCP23508 829 aa11.63□□□□□ -0.55
MCF2L2-203ENST00000447025 PABPN1Q86U42 306 aaKnown RBP eCLIP11.63□□□□□ -0.55
MCF2L2-203ENST00000447025 CLGNO14967 610 aa11.62□□□□□ -0.55
MCF2L2-203ENST00000447025 NEFMP07197 916 aa11.62□□□□□ -0.55
MCF2L2-203ENST00000447025 FAM193AP78312 1265 aa11.62□□□□□ -0.55
MCF2L2-203ENST00000447025 PSMD1Q99460 953 aa11.62□□□□□ -0.55
MCF2L2-203ENST00000447025 FAM43BQ6ZT52 329 aaPredicted RBP11.61□□□□□ -0.55
MCF2L2-203ENST00000447025 MMP14P50281 582 aa11.6□□□□□ -0.55
MCF2L2-203ENST00000447025 PLCD3Q8N3E9 789 aa11.6□□□□□ -0.55
MCF2L2-203ENST00000447025 USP35Q9P2H5 1018 aa11.59□□□□□ -0.55
MCF2L2-203ENST00000447025 KDM2AQ9Y2K7 1162 aa11.59□□□□□ -0.55
MCF2L2-203ENST00000447025 PTMSP20962 102 aa11.59□□□□□ -0.55
MCF2L2-203ENST00000447025 TMEM51Q9NW97 253 aa11.59□□□□□ -0.55
MCF2L2-203ENST00000447025 NPM1P06748 294 aaKnown RBP eCLIP11.58□□□□□ -0.56
MCF2L2-203ENST00000447025 ZNF622Q969S3 477 aaKnown RBP eCLIP11.55□□□□□ -0.56
MCF2L2-203ENST00000447025 PDCL3Q9H2J4 239 aa11.54□□□□□ -0.56
MCF2L2-203ENST00000447025 PATL2C9JE40 543 aaKnown RBP11.53□□□□□ -0.56
MCF2L2-203ENST00000447025 SETQ01105 290 aaPredicted RBP11.53□□□□□ -0.56
MCF2L2-203ENST00000447025 IRX3P78415 501 aaPredicted RBP11.52□□□□□ -0.57
MCF2L2-203ENST00000447025 CERS3Q8IU89 383 aa11.52□□□□□ -0.57
MCF2L2-203ENST00000447025 PRDM16Q9HAZ2 1276 aa11.52□□□□□ -0.57
MCF2L2-203ENST00000447025 PHF14O94880 888 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms