RNA–Protein interactions for RNA: ENST00000446547.5

RAB5A-205, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5A, Length 1,358 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-205ENST00000446547 MS4A3Q96HJ5 214 aa11.82□□□□□ -0.52
RAB5A-205ENST00000446547 ATMINO43313 823 aaPredicted RBP11.79□□□□□ -0.52
RAB5A-205ENST00000446547 C7P10643 843 aa11.77□□□□□ -0.53
RAB5A-205ENST00000446547 SLC39A7Q92504 469 aa11.77□□□□□ -0.53
RAB5A-205ENST00000446547 METRNQ9UJH8 293 aa11.76□□□□□ -0.53
RAB5A-205ENST00000446547 CCDC61Q9Y6R9 512 aa11.76□□□□□ -0.53
RAB5A-205ENST00000446547 PLSCR2Q9NRY7 297 aa11.75□□□□□ -0.53
RAB5A-205ENST00000446547 TSPYL2Q9H2G4 693 aaPredicted RBP11.72□□□□□ -0.53
RAB5A-205ENST00000446547 POTEJP0CG39 1038 aa11.71□□□□□ -0.53
RAB5A-205ENST00000446547 KIF12Q96FN5 646 aa11.69□□□□□ -0.54
RAB5A-205ENST00000446547 POTEMA6NI47 508 aa11.68□□□□□ -0.54
RAB5A-205ENST00000446547 ATN1P54259 1190 aaPredicted RBP11.66□□□□□ -0.54
RAB5A-205ENST00000446547 MAMSTRQ6ZN01 415 aa11.66□□□□□ -0.54
RAB5A-205ENST00000446547 POTEGQ6S5H5 508 aa11.65□□□□□ -0.55
RAB5A-205ENST00000446547 PLEKHG5O94827 1062 aa11.61□□□□□ -0.55
RAB5A-205ENST00000446547 BMP2KQ9NSY1 1161 aaPredicted RBP11.61□□□□□ -0.55
RAB5A-205ENST00000446547 TIE1P35590 1138 aa11.59□□□□□ -0.55
RAB5A-205ENST00000446547 RASEFQ8IZ41 740 aa11.59□□□□□ -0.55
RAB5A-205ENST00000446547 MIER1Q8N108 512 aa11.59□□□□□ -0.55
RAB5A-205ENST00000446547 POTEFA5A3E0 1075 aa11.58□□□□□ -0.56
RAB5A-205ENST00000446547 MAP3K13O43283 966 aa11.58□□□□□ -0.56
RAB5A-205ENST00000446547 SLC24A1O60721 1099 aa11.58□□□□□ -0.56
RAB5A-205ENST00000446547 TRPC6Q9Y210 931 aa11.58□□□□□ -0.56
RAB5A-205ENST00000446547 PCDH10Q9P2E7 1040 aa11.57□□□□□ -0.56
RAB5A-205ENST00000446547 SCUBE2Q9NQ36 999 aa11.55□□□□□ -0.56
RAB5A-205ENST00000446547 LCE2DQ5TA82 110 aaPredicted RBP11.54□□□□□ -0.56
RAB5A-205ENST00000446547 SGIP1Q9BQI5 828 aa11.51□□□□□ -0.57
RAB5A-205ENST00000446547 TTLL13PA6NNM8 815 aa11.5□□□□□ -0.57
RAB5A-205ENST00000446547 PLCD3Q8N3E9 789 aa11.45□□□□□ -0.58
RAB5A-205ENST00000446547 FAM163AQ96GL9 167 aaPredicted RBP11.45□□□□□ -0.58
RAB5A-205ENST00000446547 COLQQ9Y215 455 aaPredicted RBP11.45□□□□□ -0.58
RAB5A-205ENST00000446547 NUBP1P53384 320 aa11.44□□□□□ -0.58
RAB5A-205ENST00000446547 IER5LQ5T953 404 aa11.44□□□□□ -0.58
RAB5A-205ENST00000446547 ZBTB47Q9UFB7 747 aaPredicted RBP11.44□□□□□ -0.58
RAB5A-205ENST00000446547 PCDHB13Q9Y5F0 798 aa11.42□□□□□ -0.58
RAB5A-205ENST00000446547 SEC24BO95487 1268 aa11.41□□□□□ -0.58
RAB5A-205ENST00000446547 TRIM35Q9UPQ4 493 aa11.41□□□□□ -0.58
RAB5A-205ENST00000446547 IFNL1Q8IU54 200 aa11.37□□□□□ -0.59
RAB5A-205ENST00000446547 FBXO3Q9UK99 471 aa11.37□□□□□ -0.59
RAB5A-205ENST00000446547 FAM212AQ96EL1 285 aa11.33□□□□□ -0.6
RAB5A-205ENST00000446547 TMEM106CQ9BVX2 250 aa11.29□□□□□ -0.6
RAB5A-205ENST00000446547 IRX5P78411 483 aaPredicted RBP11.27□□□□□ -0.61
RAB5A-205ENST00000446547 VASPP50552 380 aaPredicted RBP11.25□□□□□ -0.61
RAB5A-205ENST00000446547 SLAIN1Q8ND83 568 aa11.25□□□□□ -0.61
RAB5A-205ENST00000446547 PLCG2P16885 1265 aa11.24□□□□□ -0.61
RAB5A-205ENST00000446547 CDAN1Q8IWY9 1227 aa11.22□□□□□ -0.61
RAB5A-205ENST00000446547 ST18O60284 1047 aa11.21□□□□□ -0.61
RAB5A-205ENST00000446547 OCEL1Q9H607 264 aa11.19□□□□□ -0.62
RAB5A-205ENST00000446547 DCAF8Q5TAQ9 597 aa11.17□□□□□ -0.62
RAB5A-205ENST00000446547 PYGBP11216 843 aa11.16□□□□□ -0.62
RAB5A-205ENST00000446547 IFNLR1Q8IU57 520 aaPredicted RBP11.16□□□□□ -0.62
RAB5A-205ENST00000446547 ABCC9O60706 1549 aa11.15□□□□□ -0.62
RAB5A-205ENST00000446547 PCDHB8Q9UN66 801 aa11.13□□□□□ -0.63
RAB5A-205ENST00000446547 TMEM121BQ9BXQ6 578 aaPredicted RBP11.11□□□□□ -0.63
RAB5A-205ENST00000446547 SNPHO15079 494 aa11.08□□□□□ -0.64
RAB5A-205ENST00000446547 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.08□□□□□ -0.64
RAB5A-205ENST00000446547 PDCD7Q8N8D1 485 aaKnown RBP11.05□□□□□ -0.64
RAB5A-205ENST00000446547 GSE1Q14687 1217 aa11.04□□□□□ -0.64
RAB5A-205ENST00000446547 ZNF467Q7Z7K2 595 aaPredicted RBP11.04□□□□□ -0.64
RAB5A-205ENST00000446547 CHRM1P11229 460 aaPredicted RBP11.03□□□□□ -0.64
RAB5A-205ENST00000446547 DCAF8L2P0C7V8 631 aa11.03□□□□□ -0.64
RAB5A-205ENST00000446547 PKD2Q13563 968 aa10.99□□□□□ -0.65
RAB5A-205ENST00000446547 L3MBTL3Q96JM7 780 aaPredicted RBP10.99□□□□□ -0.65
RAB5A-205ENST00000446547 MKRN3Q13064 507 aaKnown RBP10.98□□□□□ -0.65
RAB5A-205ENST00000446547 KLHL34Q8N239 644 aa10.98□□□□□ -0.65
RAB5A-205ENST00000446547 SPNS2Q8IVW8 549 aa10.97□□□□□ -0.65
RAB5A-205ENST00000446547 DNAJC5Q9H3Z4 198 aa10.97□□□□□ -0.65
RAB5A-205ENST00000446547 MMRN1Q13201 1228 aa10.96□□□□□ -0.65
RAB5A-205ENST00000446547 ILDR1Q86SU0 546 aaPredicted RBP10.96□□□□□ -0.65
RAB5A-205ENST00000446547 PLCB2Q00722 1185 aa10.95□□□□□ -0.66
RAB5A-205ENST00000446547 GOLGA2Q08379 1002 aa10.95□□□□□ -0.66
RAB5A-205ENST00000446547 C3orf67Q6ZVT6 689 aa10.95□□□□□ -0.66
RAB5A-205ENST00000446547 MARVELD3Q96A59 401 aa10.95□□□□□ -0.66
RAB5A-205ENST00000446547 PSEN1P49768 467 aa10.94□□□□□ -0.66
RAB5A-205ENST00000446547 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.92□□□□□ -0.663e-6■■■□□ 15.8
RAB5A-205ENST00000446547 NISCHQ9Y2I1 1504 aa10.92□□□□□ -0.66
RAB5A-205ENST00000446547 SPOCK2Q92563 424 aa10.91□□□□□ -0.66
RAB5A-205ENST00000446547 PDAP1Q13442 181 aaKnown RBP10.88□□□□□ -0.67
RAB5A-205ENST00000446547 EMP3P54852 163 aa10.87□□□□□ -0.67
RAB5A-205ENST00000446547 HAP1P54257 671 aaPredicted RBP10.85□□□□□ -0.67
RAB5A-205ENST00000446547 POTEB3A0JP26 581 aa10.83□□□□□ -0.68
RAB5A-205ENST00000446547 ECM2O94769 699 aaPredicted RBP10.83□□□□□ -0.68
RAB5A-205ENST00000446547 POTEBQ6S5H4 581 aa10.83□□□□□ -0.68
RAB5A-205ENST00000446547 DPY19L2Q6NUT2 758 aa10.82□□□□□ -0.68
RAB5A-205ENST00000446547 HS3ST6Q96QI5 342 aa10.82□□□□□ -0.68
RAB5A-205ENST00000446547 KRTAP3-3Q9BYR6 98 aa10.81□□□□□ -0.68
RAB5A-205ENST00000446547 KRTAP3-2Q9BYR7 98 aa10.81□□□□□ -0.68
RAB5A-205ENST00000446547 CABP2Q9NPB3 220 aa10.79□□□□□ -0.68
RAB5A-205ENST00000446547 FAM205CA6NFA0 338 aa10.78□□□□□ -0.68
RAB5A-205ENST00000446547 BOLA1Q9Y3E2 137 aa10.78□□□□□ -0.68
RAB5A-205ENST00000446547 HOXB3P14651 431 aaPredicted RBP10.77□□□□□ -0.69
RAB5A-205ENST00000446547 CIZ1Q9ULV3 898 aaPredicted RBP10.75□□□□□ -0.69
RAB5A-205ENST00000446547 G3V3G9 751 aa10.73□□□□□ -0.69
RAB5A-205ENST00000446547 RGL2O15211 777 aa10.73□□□□□ -0.69
RAB5A-205ENST00000446547 HOXB1P14653 301 aaPredicted RBP10.71□□□□□ -0.69
RAB5A-205ENST00000446547 BBXQ8WY36 941 aaPredicted RBP10.69□□□□□ -0.7
RAB5A-205ENST00000446547 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.68□□□□□ -0.7
RAB5A-205ENST00000446547 DOK7Q18PE1 504 aa10.66□□□□□ -0.7
RAB5A-205ENST00000446547 TRIM41Q8WV44 630 aa10.66□□□□□ -0.7
RAB5A-205ENST00000446547 PAXIP1Q6ZW49 1069 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms