RNA–Protein interactions for RNA: ENST00000446439.1

RPS29P28-201, Transcript of ribosomal protein S29 pseudogene 28, humanhuman

BASIC

Gene RPS29P28, Length 141 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS29P28-201ENST00000446439 ATMINO43313 823 aaPredicted RBP4.8□□□□□ -1.64
RPS29P28-201ENST00000446439 SLC39A7Q92504 469 aa4.8□□□□□ -1.64
RPS29P28-201ENST00000446439 NPM1P06748 294 aaKnown RBP eCLIP4.79□□□□□ -1.64
RPS29P28-201ENST00000446439 MAMSTRQ6ZN01 415 aa4.79□□□□□ -1.64
RPS29P28-201ENST00000446439 MS4A3Q96HJ5 214 aa4.78□□□□□ -1.64
RPS29P28-201ENST00000446439 SPDYE4A6NLX3 237 aa4.74□□□□□ -1.65
RPS29P28-201ENST00000446439 SCUBE2Q9NQ36 999 aa4.73□□□□□ -1.65
RPS29P28-201ENST00000446439 CCDC61Q9Y6R9 512 aa4.73□□□□□ -1.65
RPS29P28-201ENST00000446439 POTEFA5A3E0 1075 aa4.72□□□□□ -1.65
RPS29P28-201ENST00000446439 ATN1P54259 1190 aaPredicted RBP4.72□□□□□ -1.65
RPS29P28-201ENST00000446439 PROM2Q8N271 834 aa4.7□□□□□ -1.66
RPS29P28-201ENST00000446439 CSRNP3Q8WYN3 585 aa4.7□□□□□ -1.66
RPS29P28-201ENST00000446439 KIF12Q96FN5 646 aa4.7□□□□□ -1.66
RPS29P28-201ENST00000446439 TIE1P35590 1138 aa4.69□□□□□ -1.66
RPS29P28-201ENST00000446439 FAM163AQ96GL9 167 aaPredicted RBP4.69□□□□□ -1.66
RPS29P28-201ENST00000446439 BMP2KQ9NSY1 1161 aaPredicted RBP4.69□□□□□ -1.66
RPS29P28-201ENST00000446439 TRPC6Q9Y210 931 aa4.66□□□□□ -1.66
RPS29P28-201ENST00000446439 IER5LQ5T953 404 aa4.65□□□□□ -1.67
RPS29P28-201ENST00000446439 CDAN1Q8IWY9 1227 aa4.65□□□□□ -1.67
RPS29P28-201ENST00000446439 TSPYL2Q9H2G4 693 aaPredicted RBP4.65□□□□□ -1.67
RPS29P28-201ENST00000446439 COLQQ9Y215 455 aaPredicted RBP4.64□□□□□ -1.67
RPS29P28-201ENST00000446439 TTLL13PA6NNM8 815 aa4.63□□□□□ -1.67
RPS29P28-201ENST00000446439 MAP3K13O43283 966 aa4.63□□□□□ -1.67
RPS29P28-201ENST00000446439 SGIP1Q9BQI5 828 aa4.62□□□□□ -1.67
RPS29P28-201ENST00000446439 ST18O60284 1047 aa4.59□□□□□ -1.67
RPS29P28-201ENST00000446439 SEC24BO95487 1268 aa4.59□□□□□ -1.67
RPS29P28-201ENST00000446439 RASEFQ8IZ41 740 aa4.59□□□□□ -1.67
RPS29P28-201ENST00000446439 TRIM35Q9UPQ4 493 aa4.59□□□□□ -1.67
RPS29P28-201ENST00000446439 TMEM121BQ9BXQ6 578 aaPredicted RBP4.58□□□□□ -1.68
RPS29P28-201ENST00000446439 MMRN1Q13201 1228 aa4.57□□□□□ -1.68
RPS29P28-201ENST00000446439 SPNS2Q8IVW8 549 aa4.56□□□□□ -1.68
RPS29P28-201ENST00000446439 SLAIN1Q8ND83 568 aa4.56□□□□□ -1.68
RPS29P28-201ENST00000446439 PLEKHG5O94827 1062 aa4.55□□□□□ -1.68
RPS29P28-201ENST00000446439 IRX5P78411 483 aaPredicted RBP4.55□□□□□ -1.68
RPS29P28-201ENST00000446439 PCDHB13Q9Y5F0 798 aa4.54□□□□□ -1.68
RPS29P28-201ENST00000446439 NUBP1P53384 320 aa4.52□□□□□ -1.69
RPS29P28-201ENST00000446439 IFNL1Q8IU54 200 aa4.52□□□□□ -1.69
RPS29P28-201ENST00000446439 SNPHO15079 494 aa4.51□□□□□ -1.69
RPS29P28-201ENST00000446439 PLCG2P16885 1265 aa4.51□□□□□ -1.69
RPS29P28-201ENST00000446439 MIER1Q8N108 512 aa4.51□□□□□ -1.69
RPS29P28-201ENST00000446439 TMEM106CQ9BVX2 250 aa4.5□□□□□ -1.69
RPS29P28-201ENST00000446439 OCEL1Q9H607 264 aa4.5□□□□□ -1.69
RPS29P28-201ENST00000446439 ZBTB47Q9UFB7 747 aaPredicted RBP4.49□□□□□ -1.69
RPS29P28-201ENST00000446439 FAM212AQ96EL1 285 aa4.47□□□□□ -1.69
RPS29P28-201ENST00000446439 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.47□□□□□ -1.69
RPS29P28-201ENST00000446439 MARVELD3Q96A59 401 aa4.46□□□□□ -1.7
RPS29P28-201ENST00000446439 KRTAP3-3Q9BYR6 98 aa4.46□□□□□ -1.7
RPS29P28-201ENST00000446439 KRTAP3-2Q9BYR7 98 aa4.46□□□□□ -1.7
RPS29P28-201ENST00000446439 PLCD3Q8N3E9 789 aa4.45□□□□□ -1.7
RPS29P28-201ENST00000446439 PDCD7Q8N8D1 485 aaKnown RBP4.45□□□□□ -1.7
RPS29P28-201ENST00000446439 POTEB3A0JP26 581 aa4.43□□□□□ -1.7
RPS29P28-201ENST00000446439 POTEBQ6S5H4 581 aa4.43□□□□□ -1.7
RPS29P28-201ENST00000446439 EHMT2Q96KQ7 1210 aa4.43□□□□□ -1.7
RPS29P28-201ENST00000446439 EMP3P54852 163 aa4.42□□□□□ -1.7
RPS29P28-201ENST00000446439 ILDR1Q86SU0 546 aaPredicted RBP4.41□□□□□ -1.7
RPS29P28-201ENST00000446439 HS3ST6Q96QI5 342 aa4.41□□□□□ -1.7
RPS29P28-201ENST00000446439 C3orf67Q6ZVT6 689 aa4.4□□□□□ -1.71
RPS29P28-201ENST00000446439 L3MBTL3Q96JM7 780 aaPredicted RBP4.4□□□□□ -1.71
RPS29P28-201ENST00000446439 PYGBP11216 843 aa4.38□□□□□ -1.71
RPS29P28-201ENST00000446439 PCDHB8Q9UN66 801 aa4.38□□□□□ -1.71
RPS29P28-201ENST00000446439 FAM205CA6NFA0 338 aa4.37□□□□□ -1.71
RPS29P28-201ENST00000446439 HOXB3P14651 431 aaPredicted RBP4.36□□□□□ -1.71
RPS29P28-201ENST00000446439 ZNF467Q7Z7K2 595 aaPredicted RBP4.36□□□□□ -1.71
RPS29P28-201ENST00000446439 CHRM1P11229 460 aaPredicted RBP4.35□□□□□ -1.71
RPS29P28-201ENST00000446439 HOXB1P14653 301 aaPredicted RBP4.34□□□□□ -1.71
RPS29P28-201ENST00000446439 MKRN3Q13064 507 aaKnown RBP4.34□□□□□ -1.71
RPS29P28-201ENST00000446439 DCAF8Q5TAQ9 597 aa4.34□□□□□ -1.71
RPS29P28-201ENST00000446439 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.33□□□□□ -1.72
RPS29P28-201ENST00000446439 RNF166Q96A37 237 aaPredicted RBP4.32□□□□□ -1.72
RPS29P28-201ENST00000446439 PSEN1P49768 467 aa4.31□□□□□ -1.72
RPS29P28-201ENST00000446439 GOLGA2Q08379 1002 aa4.31□□□□□ -1.72
RPS29P28-201ENST00000446439 GSE1Q14687 1217 aa4.31□□□□□ -1.72
RPS29P28-201ENST00000446439 DOK7Q18PE1 504 aa4.3□□□□□ -1.72
RPS29P28-201ENST00000446439 PTGER2P43116 358 aa4.29□□□□□ -1.72
RPS29P28-201ENST00000446439 DPY19L2Q6NUT2 758 aa4.29□□□□□ -1.72
RPS29P28-201ENST00000446439 BOLA1Q9Y3E2 137 aa4.29□□□□□ -1.72
RPS29P28-201ENST00000446439 PDAP1Q13442 181 aaKnown RBP4.28□□□□□ -1.72
RPS29P28-201ENST00000446439 ZSWIM6Q9HCJ5 1215 aa4.28□□□□□ -1.72
RPS29P28-201ENST00000446439 MYT1LQ9UL68 1186 aa4.28□□□□□ -1.72
RPS29P28-201ENST00000446439 ERBB3P21860 1342 aa4.27□□□□□ -1.73
RPS29P28-201ENST00000446439 ZNF687Q8N1G0 1237 aa4.27□□□□□ -1.73
RPS29P28-201ENST00000446439 ZNF710Q8N1W2 664 aa4.27□□□□□ -1.73
RPS29P28-201ENST00000446439 FBXO3Q9UK99 471 aa4.27□□□□□ -1.73
RPS29P28-201ENST00000446439 RIMBP2O15034 1052 aa4.26□□□□□ -1.73
RPS29P28-201ENST00000446439 VARS2Q5ST30 1063 aaKnown RBP4.25□□□□□ -1.73
RPS29P28-201ENST00000446439 G3V3G9 751 aa4.24□□□□□ -1.73
RPS29P28-201ENST00000446439 GPR153Q6NV75 609 aa4.24□□□□□ -1.73
RPS29P28-201ENST00000446439 FKBP8Q14318 412 aa4.23□□□□□ -1.73
RPS29P28-201ENST00000446439 CABP2Q9NPB3 220 aa4.23□□□□□ -1.73
RPS29P28-201ENST00000446439 VASPP50552 380 aaPredicted RBP4.22□□□□□ -1.73
RPS29P28-201ENST00000446439 TMEM92Q6UXU6 159 aa4.22□□□□□ -1.73
RPS29P28-201ENST00000446439 MICALL2Q8IY33 904 aa4.2□□□□□ -1.74
RPS29P28-201ENST00000446439 KLHL34Q8N239 644 aa4.19□□□□□ -1.74
RPS29P28-201ENST00000446439 LSM11P83369 360 aaKnown RBP eCLIP4.18□□□□□ -1.74
RPS29P28-201ENST00000446439 ZNF316A6NFI3 1004 aaPredicted RBP4.17□□□□□ -1.74
RPS29P28-201ENST00000446439 PBX2P40425 430 aa4.16□□□□□ -1.74
RPS29P28-201ENST00000446439 EFCAB3Q8N7B9 438 aa4.16□□□□□ -1.74
RPS29P28-201ENST00000446439 TRIM41Q8WV44 630 aa4.15□□□□□ -1.75
RPS29P28-201ENST00000446439 MS4A4AQ96JQ5 239 aa4.15□□□□□ -1.75
RPS29P28-201ENST00000446439 SOX12O15370 315 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms