RNA–Protein interactions for RNA: ENST00000446439.1

RPS29P28-201, Transcript of ribosomal protein S29 pseudogene 28, humanhuman

BASIC

Gene RPS29P28, Length 141 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS29P28-201ENST00000446439 ATMINO43313 823 aaPredicted RBP4.8□□□□□ -1.64
RPS29P28-201ENST00000446439 SLC39A7Q92504 469 aa4.8□□□□□ -1.64
RPS29P28-201ENST00000446439 NPM1P06748 294 aaKnown RBP eCLIP4.79□□□□□ -1.64
RPS29P28-201ENST00000446439 MAMSTRQ6ZN01 415 aa4.79□□□□□ -1.64
RPS29P28-201ENST00000446439 MS4A3Q96HJ5 214 aa4.78□□□□□ -1.64
RPS29P28-201ENST00000446439 SPDYE4A6NLX3 237 aa4.74□□□□□ -1.65
RPS29P28-201ENST00000446439 SCUBE2Q9NQ36 999 aa4.73□□□□□ -1.65
RPS29P28-201ENST00000446439 CCDC61Q9Y6R9 512 aa4.73□□□□□ -1.65
RPS29P28-201ENST00000446439 POTEFA5A3E0 1075 aa4.72□□□□□ -1.65
RPS29P28-201ENST00000446439 ATN1P54259 1190 aaPredicted RBP4.72□□□□□ -1.65
RPS29P28-201ENST00000446439 PROM2Q8N271 834 aa4.7□□□□□ -1.66
RPS29P28-201ENST00000446439 CSRNP3Q8WYN3 585 aa4.7□□□□□ -1.66
RPS29P28-201ENST00000446439 KIF12Q96FN5 646 aa4.7□□□□□ -1.66
RPS29P28-201ENST00000446439 TIE1P35590 1138 aa4.69□□□□□ -1.66
RPS29P28-201ENST00000446439 FAM163AQ96GL9 167 aaPredicted RBP4.69□□□□□ -1.66
RPS29P28-201ENST00000446439 BMP2KQ9NSY1 1161 aaPredicted RBP4.69□□□□□ -1.66
RPS29P28-201ENST00000446439 TRPC6Q9Y210 931 aa4.66□□□□□ -1.66
RPS29P28-201ENST00000446439 IER5LQ5T953 404 aa4.65□□□□□ -1.67
RPS29P28-201ENST00000446439 CDAN1Q8IWY9 1227 aa4.65□□□□□ -1.67
RPS29P28-201ENST00000446439 TSPYL2Q9H2G4 693 aaPredicted RBP4.65□□□□□ -1.67
RPS29P28-201ENST00000446439 COLQQ9Y215 455 aaPredicted RBP4.64□□□□□ -1.67
RPS29P28-201ENST00000446439 TTLL13PA6NNM8 815 aa4.63□□□□□ -1.67
RPS29P28-201ENST00000446439 MAP3K13O43283 966 aa4.63□□□□□ -1.67
RPS29P28-201ENST00000446439 SGIP1Q9BQI5 828 aa4.62□□□□□ -1.67
RPS29P28-201ENST00000446439 ST18O60284 1047 aa4.59□□□□□ -1.67
RPS29P28-201ENST00000446439 SEC24BO95487 1268 aa4.59□□□□□ -1.67
RPS29P28-201ENST00000446439 RASEFQ8IZ41 740 aa4.59□□□□□ -1.67
RPS29P28-201ENST00000446439 TRIM35Q9UPQ4 493 aa4.59□□□□□ -1.67
RPS29P28-201ENST00000446439 TMEM121BQ9BXQ6 578 aaPredicted RBP4.58□□□□□ -1.68
RPS29P28-201ENST00000446439 MMRN1Q13201 1228 aa4.57□□□□□ -1.68
RPS29P28-201ENST00000446439 SPNS2Q8IVW8 549 aa4.56□□□□□ -1.68
RPS29P28-201ENST00000446439 SLAIN1Q8ND83 568 aa4.56□□□□□ -1.68
RPS29P28-201ENST00000446439 PLEKHG5O94827 1062 aa4.55□□□□□ -1.68
RPS29P28-201ENST00000446439 IRX5P78411 483 aaPredicted RBP4.55□□□□□ -1.68
RPS29P28-201ENST00000446439 PCDHB13Q9Y5F0 798 aa4.54□□□□□ -1.68
RPS29P28-201ENST00000446439 NUBP1P53384 320 aa4.52□□□□□ -1.69
RPS29P28-201ENST00000446439 IFNL1Q8IU54 200 aa4.52□□□□□ -1.69
RPS29P28-201ENST00000446439 SNPHO15079 494 aa4.51□□□□□ -1.69
RPS29P28-201ENST00000446439 PLCG2P16885 1265 aa4.51□□□□□ -1.69
RPS29P28-201ENST00000446439 MIER1Q8N108 512 aa4.51□□□□□ -1.69
RPS29P28-201ENST00000446439 TMEM106CQ9BVX2 250 aa4.5□□□□□ -1.69
RPS29P28-201ENST00000446439 OCEL1Q9H607 264 aa4.5□□□□□ -1.69
RPS29P28-201ENST00000446439 ZBTB47Q9UFB7 747 aaPredicted RBP4.49□□□□□ -1.69
RPS29P28-201ENST00000446439 FAM212AQ96EL1 285 aa4.47□□□□□ -1.69
RPS29P28-201ENST00000446439 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.47□□□□□ -1.69
RPS29P28-201ENST00000446439 MARVELD3Q96A59 401 aa4.46□□□□□ -1.7
RPS29P28-201ENST00000446439 KRTAP3-3Q9BYR6 98 aa4.46□□□□□ -1.7
RPS29P28-201ENST00000446439 KRTAP3-2Q9BYR7 98 aa4.46□□□□□ -1.7
RPS29P28-201ENST00000446439 PLCD3Q8N3E9 789 aa4.45□□□□□ -1.7
RPS29P28-201ENST00000446439 PDCD7Q8N8D1 485 aaKnown RBP4.45□□□□□ -1.7
RPS29P28-201ENST00000446439 POTEB3A0JP26 581 aa4.43□□□□□ -1.7
RPS29P28-201ENST00000446439 POTEBQ6S5H4 581 aa4.43□□□□□ -1.7
RPS29P28-201ENST00000446439 EHMT2Q96KQ7 1210 aa4.43□□□□□ -1.7
RPS29P28-201ENST00000446439 EMP3P54852 163 aa4.42□□□□□ -1.7
RPS29P28-201ENST00000446439 ILDR1Q86SU0 546 aaPredicted RBP4.41□□□□□ -1.7
RPS29P28-201ENST00000446439 HS3ST6Q96QI5 342 aa4.41□□□□□ -1.7
RPS29P28-201ENST00000446439 C3orf67Q6ZVT6 689 aa4.4□□□□□ -1.71
RPS29P28-201ENST00000446439 L3MBTL3Q96JM7 780 aaPredicted RBP4.4□□□□□ -1.71
RPS29P28-201ENST00000446439 PYGBP11216 843 aa4.38□□□□□ -1.71
RPS29P28-201ENST00000446439 PCDHB8Q9UN66 801 aa4.38□□□□□ -1.71
RPS29P28-201ENST00000446439 FAM205CA6NFA0 338 aa4.37□□□□□ -1.71
RPS29P28-201ENST00000446439 HOXB3P14651 431 aaPredicted RBP4.36□□□□□ -1.71
RPS29P28-201ENST00000446439 ZNF467Q7Z7K2 595 aaPredicted RBP4.36□□□□□ -1.71
RPS29P28-201ENST00000446439 CHRM1P11229 460 aaPredicted RBP4.35□□□□□ -1.71
RPS29P28-201ENST00000446439 HOXB1P14653 301 aaPredicted RBP4.34□□□□□ -1.71
RPS29P28-201ENST00000446439 MKRN3Q13064 507 aaKnown RBP4.34□□□□□ -1.71
RPS29P28-201ENST00000446439 DCAF8Q5TAQ9 597 aa4.34□□□□□ -1.71
RPS29P28-201ENST00000446439 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.33□□□□□ -1.72
RPS29P28-201ENST00000446439 RNF166Q96A37 237 aaPredicted RBP4.32□□□□□ -1.72
RPS29P28-201ENST00000446439 PSEN1P49768 467 aa4.31□□□□□ -1.72
RPS29P28-201ENST00000446439 GOLGA2Q08379 1002 aa4.31□□□□□ -1.72
RPS29P28-201ENST00000446439 GSE1Q14687 1217 aa4.31□□□□□ -1.72
RPS29P28-201ENST00000446439 DOK7Q18PE1 504 aa4.3□□□□□ -1.72
RPS29P28-201ENST00000446439 PTGER2P43116 358 aa4.29□□□□□ -1.72
RPS29P28-201ENST00000446439 DPY19L2Q6NUT2 758 aa4.29□□□□□ -1.72
RPS29P28-201ENST00000446439 BOLA1Q9Y3E2 137 aa4.29□□□□□ -1.72
RPS29P28-201ENST00000446439 PDAP1Q13442 181 aaKnown RBP4.28□□□□□ -1.72
RPS29P28-201ENST00000446439 ZSWIM6Q9HCJ5 1215 aa4.28□□□□□ -1.72
RPS29P28-201ENST00000446439 MYT1LQ9UL68 1186 aa4.28□□□□□ -1.72
RPS29P28-201ENST00000446439 ERBB3P21860 1342 aa4.27□□□□□ -1.73
RPS29P28-201ENST00000446439 ZNF687Q8N1G0 1237 aa4.27□□□□□ -1.73
RPS29P28-201ENST00000446439 ZNF710Q8N1W2 664 aa4.27□□□□□ -1.73
RPS29P28-201ENST00000446439 FBXO3Q9UK99 471 aa4.27□□□□□ -1.73
RPS29P28-201ENST00000446439 RIMBP2O15034 1052 aa4.26□□□□□ -1.73
RPS29P28-201ENST00000446439 VARS2Q5ST30 1063 aaKnown RBP4.25□□□□□ -1.73
RPS29P28-201ENST00000446439 G3V3G9 751 aa4.24□□□□□ -1.73
RPS29P28-201ENST00000446439 GPR153Q6NV75 609 aa4.24□□□□□ -1.73
RPS29P28-201ENST00000446439 FKBP8Q14318 412 aa4.23□□□□□ -1.73
RPS29P28-201ENST00000446439 CABP2Q9NPB3 220 aa4.23□□□□□ -1.73
RPS29P28-201ENST00000446439 VASPP50552 380 aaPredicted RBP4.22□□□□□ -1.73
RPS29P28-201ENST00000446439 TMEM92Q6UXU6 159 aa4.22□□□□□ -1.73
RPS29P28-201ENST00000446439 MICALL2Q8IY33 904 aa4.2□□□□□ -1.74
RPS29P28-201ENST00000446439 KLHL34Q8N239 644 aa4.19□□□□□ -1.74
RPS29P28-201ENST00000446439 LSM11P83369 360 aaKnown RBP eCLIP4.18□□□□□ -1.74
RPS29P28-201ENST00000446439 ZNF316A6NFI3 1004 aaPredicted RBP4.17□□□□□ -1.74
RPS29P28-201ENST00000446439 PBX2P40425 430 aa4.16□□□□□ -1.74
RPS29P28-201ENST00000446439 EFCAB3Q8N7B9 438 aa4.16□□□□□ -1.74
RPS29P28-201ENST00000446439 TRIM41Q8WV44 630 aa4.15□□□□□ -1.75
RPS29P28-201ENST00000446439 MS4A4AQ96JQ5 239 aa4.15□□□□□ -1.75
RPS29P28-201ENST00000446439 SOX12O15370 315 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms