RNA–Protein interactions for RNA: ENST00000444007.1

PSMD1-206, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 3

Gene PSMD1, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-206ENST00000444007 C7P10643 843 aa10.89□□□□□ -0.67
PSMD1-206ENST00000444007 SLC39A7Q92504 469 aa10.89□□□□□ -0.67
PSMD1-206ENST00000444007 MS4A3Q96HJ5 214 aa10.88□□□□□ -0.67
PSMD1-206ENST00000444007 SPDYE4A6NLX3 237 aa10.87□□□□□ -0.67
PSMD1-206ENST00000444007 LCE2DQ5TA82 110 aaPredicted RBP10.86□□□□□ -0.67
PSMD1-206ENST00000444007 MAMSTRQ6ZN01 415 aa10.85□□□□□ -0.67
PSMD1-206ENST00000444007 CSRNP3Q8WYN3 585 aa10.81□□□□□ -0.68
PSMD1-206ENST00000444007 FAM163AQ96GL9 167 aaPredicted RBP10.78□□□□□ -0.68
PSMD1-206ENST00000444007 ATN1P54259 1190 aaPredicted RBP10.76□□□□□ -0.69
PSMD1-206ENST00000444007 SCUBE2Q9NQ36 999 aa10.75□□□□□ -0.69
PSMD1-206ENST00000444007 POTEFA5A3E0 1075 aa10.72□□□□□ -0.69
PSMD1-206ENST00000444007 CCDC61Q9Y6R9 512 aa10.72□□□□□ -0.69
PSMD1-206ENST00000444007 TSPYL2Q9H2G4 693 aaPredicted RBP10.71□□□□□ -0.69
PSMD1-206ENST00000444007 KIF12Q96FN5 646 aa10.68□□□□□ -0.7
PSMD1-206ENST00000444007 BMP2KQ9NSY1 1161 aaPredicted RBP10.68□□□□□ -0.7
PSMD1-206ENST00000444007 TRPC6Q9Y210 931 aa10.64□□□□□ -0.71
PSMD1-206ENST00000444007 TIE1P35590 1138 aa10.6□□□□□ -0.71
PSMD1-206ENST00000444007 CDAN1Q8IWY9 1227 aa10.59□□□□□ -0.71
PSMD1-206ENST00000444007 MAP3K13O43283 966 aa10.58□□□□□ -0.72
PSMD1-206ENST00000444007 COLQQ9Y215 455 aaPredicted RBP10.58□□□□□ -0.72
PSMD1-206ENST00000444007 PROM2Q8N271 834 aa10.57□□□□□ -0.72
PSMD1-206ENST00000444007 TTLL13PA6NNM8 815 aa10.54□□□□□ -0.72
PSMD1-206ENST00000444007 SEC24BO95487 1268 aa10.53□□□□□ -0.72
PSMD1-206ENST00000444007 RASEFQ8IZ41 740 aa10.51□□□□□ -0.73
PSMD1-206ENST00000444007 IER5LQ5T953 404 aa10.48□□□□□ -0.73
PSMD1-206ENST00000444007 ST18O60284 1047 aa10.46□□□□□ -0.73
PSMD1-206ENST00000444007 TRIM35Q9UPQ4 493 aa10.46□□□□□ -0.73
PSMD1-206ENST00000444007 SLAIN1Q8ND83 568 aa10.44□□□□□ -0.74
PSMD1-206ENST00000444007 SGIP1Q9BQI5 828 aa10.43□□□□□ -0.74
PSMD1-206ENST00000444007 PLEKHG5O94827 1062 aa10.42□□□□□ -0.74
PSMD1-206ENST00000444007 MIER1Q8N108 512 aa10.41□□□□□ -0.74
PSMD1-206ENST00000444007 PCDHB13Q9Y5F0 798 aa10.39□□□□□ -0.75
PSMD1-206ENST00000444007 MMRN1Q13201 1228 aa10.37□□□□□ -0.75
PSMD1-206ENST00000444007 EHMT2Q96KQ7 1210 aa10.36□□□□□ -0.75
PSMD1-206ENST00000444007 SPNS2Q8IVW8 549 aa10.35□□□□□ -0.75
PSMD1-206ENST00000444007 IFNL1Q8IU54 200 aa10.34□□□□□ -0.75
PSMD1-206ENST00000444007 PLCG2P16885 1265 aa10.32□□□□□ -0.76
PSMD1-206ENST00000444007 IRX5P78411 483 aaPredicted RBP10.31□□□□□ -0.76
PSMD1-206ENST00000444007 TMEM106CQ9BVX2 250 aa10.31□□□□□ -0.76
PSMD1-206ENST00000444007 TMEM121BQ9BXQ6 578 aaPredicted RBP10.31□□□□□ -0.76
PSMD1-206ENST00000444007 NUBP1P53384 320 aa10.3□□□□□ -0.76
PSMD1-206ENST00000444007 PLCD3Q8N3E9 789 aa10.25□□□□□ -0.77
PSMD1-206ENST00000444007 SNPHO15079 494 aa10.24□□□□□ -0.77
PSMD1-206ENST00000444007 OCEL1Q9H607 264 aa10.23□□□□□ -0.77
PSMD1-206ENST00000444007 MARVELD3Q96A59 401 aa10.22□□□□□ -0.77
PSMD1-206ENST00000444007 ZBTB47Q9UFB7 747 aaPredicted RBP10.22□□□□□ -0.77
PSMD1-206ENST00000444007 FAM212AQ96EL1 285 aa10.2□□□□□ -0.78
PSMD1-206ENST00000444007 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.2□□□□□ -0.78
PSMD1-206ENST00000444007 EMP3P54852 163 aa10.1□□□□□ -0.79
PSMD1-206ENST00000444007 KRTAP3-3Q9BYR6 98 aa10.1□□□□□ -0.79
PSMD1-206ENST00000444007 KRTAP3-2Q9BYR7 98 aa10.1□□□□□ -0.79
PSMD1-206ENST00000444007 POTEB3A0JP26 581 aa10.09□□□□□ -0.79
PSMD1-206ENST00000444007 POTEBQ6S5H4 581 aa10.09□□□□□ -0.79
PSMD1-206ENST00000444007 PYGBP11216 843 aa10.08□□□□□ -0.8
PSMD1-206ENST00000444007 PDCD7Q8N8D1 485 aaKnown RBP10.08□□□□□ -0.8
PSMD1-206ENST00000444007 PCDHB8Q9UN66 801 aa10.08□□□□□ -0.8
PSMD1-206ENST00000444007 HS3ST6Q96QI5 342 aa10.07□□□□□ -0.8
PSMD1-206ENST00000444007 DCAF8Q5TAQ9 597 aa10.04□□□□□ -0.8
PSMD1-206ENST00000444007 C3orf67Q6ZVT6 689 aa10.04□□□□□ -0.8
PSMD1-206ENST00000444007 FAM205CA6NFA0 338 aa10.03□□□□□ -0.8
PSMD1-206ENST00000444007 L3MBTL3Q96JM7 780 aaPredicted RBP10.02□□□□□ -0.81
PSMD1-206ENST00000444007 MKRN3Q13064 507 aaKnown RBP9.97□□□□□ -0.81
PSMD1-206ENST00000444007 GOLGA2Q08379 1002 aa9.94□□□□□ -0.82
PSMD1-206ENST00000444007 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.94□□□□□ -0.827e-7■□□□□ 11.3
PSMD1-206ENST00000444007 ZNF467Q7Z7K2 595 aaPredicted RBP9.92□□□□□ -0.82
PSMD1-206ENST00000444007 ILDR1Q86SU0 546 aaPredicted RBP9.92□□□□□ -0.82
PSMD1-206ENST00000444007 HOXB3P14651 431 aaPredicted RBP9.89□□□□□ -0.83
PSMD1-206ENST00000444007 CHRM1P11229 460 aaPredicted RBP9.86□□□□□ -0.83
PSMD1-206ENST00000444007 PSEN1P49768 467 aa9.86□□□□□ -0.83
PSMD1-206ENST00000444007 DPY19L2Q6NUT2 758 aa9.86□□□□□ -0.83
PSMD1-206ENST00000444007 HOXB1P14653 301 aaPredicted RBP9.85□□□□□ -0.83
PSMD1-206ENST00000444007 GSE1Q14687 1217 aa9.85□□□□□ -0.83
PSMD1-206ENST00000444007 RNF166Q96A37 237 aaPredicted RBP9.83□□□□□ -0.84
PSMD1-206ENST00000444007 BOLA1Q9Y3E2 137 aa9.82□□□□□ -0.84
PSMD1-206ENST00000444007 FKBP8Q14318 412 aa9.81□□□□□ -0.84
PSMD1-206ENST00000444007 ERBB3P21860 1342 aa9.81□□□□□ -0.84
PSMD1-206ENST00000444007 ZNF710Q8N1W2 664 aa9.8□□□□□ -0.84
PSMD1-206ENST00000444007 PDAP1Q13442 181 aaKnown RBP9.77□□□□□ -0.85
PSMD1-206ENST00000444007 DOK7Q18PE1 504 aa9.77□□□□□ -0.85
PSMD1-206ENST00000444007 G3V3G9 751 aa9.76□□□□□ -0.85
PSMD1-206ENST00000444007 FBXO3Q9UK99 471 aa9.76□□□□□ -0.85
PSMD1-206ENST00000444007 MYT1LQ9UL68 1186 aa9.75□□□□□ -0.85
PSMD1-206ENST00000444007 VARS2Q5ST30 1063 aaKnown RBP9.74□□□□□ -0.85
PSMD1-206ENST00000444007 CABP2Q9NPB3 220 aa9.74□□□□□ -0.85
PSMD1-206ENST00000444007 KLHL34Q8N239 644 aa9.73□□□□□ -0.85
PSMD1-206ENST00000444007 ZNF687Q8N1G0 1237 aa9.7□□□□□ -0.86
PSMD1-206ENST00000444007 RIMBP2O15034 1052 aa9.69□□□□□ -0.86
PSMD1-206ENST00000444007 VASPP50552 380 aaPredicted RBP9.67□□□□□ -0.86
PSMD1-206ENST00000444007 ZSWIM6Q9HCJ5 1215 aa9.67□□□□□ -0.86
PSMD1-206ENST00000444007 PTGER2P43116 358 aa9.65□□□□□ -0.86
PSMD1-206ENST00000444007 GPR153Q6NV75 609 aa9.63□□□□□ -0.87
PSMD1-206ENST00000444007 TMEM92Q6UXU6 159 aa9.62□□□□□ -0.87
PSMD1-206ENST00000444007 MICALL2Q8IY33 904 aa9.58□□□□□ -0.88
PSMD1-206ENST00000444007 EFCAB3Q8N7B9 438 aa9.57□□□□□ -0.88
PSMD1-206ENST00000444007 ANKRD13DQ6ZTN6 518 aa9.56□□□□□ -0.88
PSMD1-206ENST00000444007 CIZ1Q9ULV3 898 aaPredicted RBP9.55□□□□□ -0.88
PSMD1-206ENST00000444007 ARSIQ5FYB1 569 aa9.52□□□□□ -0.89
PSMD1-206ENST00000444007 SPOCK2Q92563 424 aa9.52□□□□□ -0.89
PSMD1-206ENST00000444007 ZNF316A6NFI3 1004 aaPredicted RBP9.5□□□□□ -0.89
PSMD1-206ENST00000444007 LSM11P83369 360 aaKnown RBP eCLIP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms