RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 GOLGA3Q08378 1498 aa15.01□□□□□ -0.01
FN1-211ENST00000443816 MYH16Q9H6N6 1097 aa15□□□□□ -0.01
FN1-211ENST00000443816 TRHP20396 242 aaPredicted RBP14.98□□□□□ -0.01
FN1-211ENST00000443816 DCAF1Q9Y4B6 1507 aa14.96□□□□□ -0.01
FN1-211ENST00000443816 FAM9BQ8IZU0 186 aa14.96□□□□□ -0.02
FN1-211ENST00000443816 PLEKHG5O94827 1062 aa14.95□□□□□ -0.02
FN1-211ENST00000443816 CDCA8Q53HL2 280 aa14.95□□□□□ -0.02
FN1-211ENST00000443816 WRNQ14191 1432 aaPredicted RBP eCLIP14.94□□□□□ -0.02
FN1-211ENST00000443816 CFDP1Q9UEE9 299 aaPredicted RBP14.94□□□□□ -0.02
FN1-211ENST00000443816 EIF4G1Q04637 1599 aaKnown RBP14.93□□□□□ -0.02
FN1-211ENST00000443816 HNRNPUQ00839 825 aaKnown RBP eCLIP14.93□□□□□ -0.02
FN1-211ENST00000443816 SALL2Q9Y467 1007 aaPredicted RBP14.92□□□□□ -0.02
FN1-211ENST00000443816 RRP7BPQ9NSQ0 103 aa14.91□□□□□ -0.02
FN1-211ENST00000443816 GTF3C3Q9Y5Q9 886 aa14.91□□□□□ -0.02
FN1-211ENST00000443816 SMARCA2P51531 1590 aa14.91□□□□□ -0.02
FN1-211ENST00000443816 HDGFP51858 240 aaKnown RBP14.9□□□□□ -0.02
FN1-211ENST00000443816 DDX10Q13206 875 aaKnown RBP14.9□□□□□ -0.02
FN1-211ENST00000443816 SENP3Q9H4L4 574 aaPredicted RBP14.89□□□□□ -0.03
FN1-211ENST00000443816 KANK1Q14678 1352 aa14.89□□□□□ -0.03
FN1-211ENST00000443816 CFAP53Q96M91 514 aa14.88□□□□□ -0.03
FN1-211ENST00000443816 EIF4G2P78344 907 aaKnown RBP eCLIP14.88□□□□□ -0.03
FN1-211ENST00000443816 CEP164Q9UPV0 1460 aa14.88□□□□□ -0.03
FN1-211ENST00000443816 CDK11BP21127 795 aaKnown RBP14.85□□□□□ -0.03
FN1-211ENST00000443816 FHAD1B1AJZ9 1412 aa14.84□□□□□ -0.03
FN1-211ENST00000443816 RGL3Q3MIN7 710 aa14.83□□□□□ -0.03
FN1-211ENST00000443816 NPHP1O15259 732 aa14.83□□□□□ -0.03
FN1-211ENST00000443816 ARXQ96QS3 562 aa14.83□□□□□ -0.03
FN1-211ENST00000443816 POGKQ9P215 609 aa14.83□□□□□ -0.04
FN1-211ENST00000443816 MRS2Q9HD23 443 aa14.81□□□□□ -0.04
FN1-211ENST00000443816 PDS5BQ9NTI5 1447 aa14.81□□□□□ -0.04
FN1-211ENST00000443816 KNSTRNQ9Y448 316 aa14.81□□□□□ -0.04
FN1-211ENST00000443816 LMOD2Q6P5Q4 547 aa14.81□□□□□ -0.04
FN1-211ENST00000443816 CCDC136Q96JN2 1154 aa14.79□□□□□ -0.04
FN1-211ENST00000443816 PPM1GO15355 546 aaPredicted RBP14.78□□□□□ -0.04
FN1-211ENST00000443816 CEP162Q5TB80 1403 aa14.78□□□□□ -0.04
FN1-211ENST00000443816 CARMIL2Q6F5E8 1435 aa14.77□□□□□ -0.04
FN1-211ENST00000443816 EIF5BO60841 1220 aaKnown RBP14.77□□□□□ -0.05
FN1-211ENST00000443816 PNNQ9H307 717 aaKnown RBP14.77□□□□□ -0.05
FN1-211ENST00000443816 CCNB3Q8WWL7 1395 aa14.77□□□□□ -0.05
FN1-211ENST00000443816 FKBP8Q14318 412 aa14.76□□□□□ -0.05
FN1-211ENST00000443816 NUDCQ9Y266 331 aa14.73□□□□□ -0.05
FN1-211ENST00000443816 CASC1Q6TDU7 716 aa14.73□□□□□ -0.05
FN1-211ENST00000443816 CUX2O14529 1486 aa14.73□□□□□ -0.05
FN1-211ENST00000443816 MAPK8IP3Q9UPT6 1336 aa14.71□□□□□ -0.05
FN1-211ENST00000443816 CARD11Q9BXL7 1154 aa14.7□□□□□ -0.06
FN1-211ENST00000443816 MLECQ14165 292 aa14.69□□□□□ -0.06
FN1-211ENST00000443816 FTSJ3Q8IY81 847 aaKnown RBP14.68□□□□□ -0.06
FN1-211ENST00000443816 CARMIL1Q5VZK9 1371 aa14.67□□□□□ -0.06
FN1-211ENST00000443816 CHMP4BQ9H444 224 aaKnown RBP14.65□□□□□ -0.06
FN1-211ENST00000443816 NCLP19338 710 aaKnown RBP14.65□□□□□ -0.06
FN1-211ENST00000443816 GOLGA2Q08379 1002 aa14.65□□□□□ -0.06
FN1-211ENST00000443816 TNIKQ9UKE5 1360 aa14.65□□□□□ -0.06
FN1-211ENST00000443816 LAS1LQ9Y4W2 734 aaKnown RBP14.64□□□□□ -0.07
FN1-211ENST00000443816 BECN1Q14457 450 aa14.63□□□□□ -0.07
FN1-211ENST00000443816 WIZO95785 1651 aa14.62□□□□□ -0.07
FN1-211ENST00000443816 SOGA1O94964 1423 aa14.61□□□□□ -0.07
FN1-211ENST00000443816 ARHGAP35Q9NRY4 1499 aa14.6□□□□□ -0.07
FN1-211ENST00000443816 CECR2Q9BXF3 1484 aa14.6□□□□□ -0.07
FN1-211ENST00000443816 ZRSR1Q15695 479 aaKnown RBP14.59□□□□□ -0.07
FN1-211ENST00000443816 PRDM2Q13029 1718 aa14.59□□□□□ -0.07
FN1-211ENST00000443816 HIRIP3Q9BW71 556 aaPredicted RBP14.59□□□□□ -0.07
FN1-211ENST00000443816 SRPK2P78362 688 aaKnown RBP14.59□□□□□ -0.07
FN1-211ENST00000443816 TMF1P82094 1093 aa14.58□□□□□ -0.08
FN1-211ENST00000443816 MS4A1P11836 297 aa14.58□□□□□ -0.08
FN1-211ENST00000443816 OS9Q13438 667 aaPredicted RBP14.56□□□□□ -0.08
FN1-211ENST00000443816 GOLGA6L22H0YM25 854 aa14.55□□□□□ -0.08
FN1-211ENST00000443816 DDRGK1Q96HY6 314 aa14.55□□□□□ -0.08
FN1-211ENST00000443816 GGT6Q6P531 493 aa14.55□□□□□ -0.08
FN1-211ENST00000443816 U2SURPO15042 1029 aaKnown RBP14.54□□□□□ -0.08
FN1-211ENST00000443816 FMN1Q68DA7 1419 aa14.54□□□□□ -0.08
FN1-211ENST00000443816 DCAF11Q8TEB1 546 aa14.53□□□□□ -0.08
FN1-211ENST00000443816 EID1Q9Y6B2 187 aa14.52□□□□□ -0.08
FN1-211ENST00000443816 TOP2AP11388 1531 aaKnown RBP14.52□□□□□ -0.08
FN1-211ENST00000443816 TNNT2P45379 298 aaPredicted RBP14.52□□□□□ -0.08
FN1-211ENST00000443816 CCDC88BA6NC98 1476 aa14.52□□□□□ -0.09
FN1-211ENST00000443816 RTF1Q92541 710 aaKnown RBP14.52□□□□□ -0.09
FN1-211ENST00000443816 ANP32EQ9BTT0 268 aa14.52□□□□□ -0.09
FN1-211ENST00000443816 TMX4Q9H1E5 349 aaPredicted RBP14.52□□□□□ -0.09
FN1-211ENST00000443816 EFCAB2Q5VUJ9 269 aa14.51□□□□□ -0.09
FN1-211ENST00000443816 HDGFL2Q7Z4V5 671 aaPredicted RBP14.51□□□□□ -0.09
FN1-211ENST00000443816 ABCC8Q09428 1581 aa14.51□□□□□ -0.09
FN1-211ENST00000443816 NEUROD2Q15784 382 aa14.5□□□□□ -0.09
FN1-211ENST00000443816 PAK3O75914 559 aaPredicted RBP14.49□□□□□ -0.09
FN1-211ENST00000443816 SMARCA4P51532 1647 aa14.49□□□□□ -0.09
FN1-211ENST00000443816 TULP1O00294 542 aaPredicted RBP14.47□□□□□ -0.09
FN1-211ENST00000443816 FGD1P98174 961 aa14.47□□□□□ -0.09
FN1-211ENST00000443816 CC2D1BQ5T0F9 858 aaKnown RBP14.47□□□□□ -0.09
FN1-211ENST00000443816 MROH2BQ7Z745 1585 aa14.47□□□□□ -0.09
FN1-211ENST00000443816 SOX12O15370 315 aa14.47□□□□□ -0.09
FN1-211ENST00000443816 CCDC18Q5T9S5 1454 aa14.46□□□□□ -0.09
FN1-211ENST00000443816 STK26Q9P289 416 aa14.46□□□□□ -0.1
FN1-211ENST00000443816 EIF3AQ14152 1382 aaKnown RBP14.45□□□□□ -0.1
FN1-211ENST00000443816 KCNJ4P48050 445 aa14.45□□□□□ -0.1
FN1-211ENST00000443816 CHMP4AQ9BY43 222 aa14.45□□□□□ -0.1
FN1-211ENST00000443816 MORC1Q86VD1 984 aa14.44□□□□□ -0.1
FN1-211ENST00000443816 CSB-PGBD3P0DP91 1061 aa14.44□□□□□ -0.1
FN1-211ENST00000443816 ANKRD30AQ9BXX3 1397 aa14.43□□□□□ -0.1
FN1-211ENST00000443816 SAFB2Q14151 953 aaKnown RBP eCLIP14.43□□□□□ -0.1
FN1-211ENST00000443816 CALD1Q05682 793 aaKnown RBP14.43□□□□□ -0.1
FN1-211ENST00000443816 RSPH4AQ5TD94 716 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms