RNA–Protein interactions for RNA: ENST00000443534.1

CUBNP2-201, Transcript of cubilin pseudogene 2, humanhuman

BASIC

Gene CUBNP2, Length 1,139 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP2-201ENST00000443534 LHX8Q68G74 356 aa12.64□□□□□ -0.39
CUBNP2-201ENST00000443534 ZNF579Q8NAF0 562 aaKnown RBP12.62□□□□□ -0.39
CUBNP2-201ENST00000443534 CCDC61Q9Y6R9 512 aa12.6□□□□□ -0.39
CUBNP2-201ENST00000443534 GSE1Q14687 1217 aa12.57□□□□□ -0.4
CUBNP2-201ENST00000443534 DCAF8Q5TAQ9 597 aa12.57□□□□□ -0.4
CUBNP2-201ENST00000443534 GABBR2O75899 941 aa12.54□□□□□ -0.4
CUBNP2-201ENST00000443534 PHF12Q96QT6 1004 aa12.54□□□□□ -0.4
CUBNP2-201ENST00000443534 CIZ1Q9ULV3 898 aaPredicted RBP12.52□□□□□ -0.41
CUBNP2-201ENST00000443534 CLCN6P51797 869 aa12.5□□□□□ -0.41
CUBNP2-201ENST00000443534 CCDC180Q9P1Z9 1646 aa12.48□□□□□ -0.41
CUBNP2-201ENST00000443534 KIF12Q96FN5 646 aa12.47□□□□□ -0.41
CUBNP2-201ENST00000443534 PYGBP11216 843 aa12.44□□□□□ -0.42
CUBNP2-201ENST00000443534 TRIM41Q8WV44 630 aa12.43□□□□□ -0.42
CUBNP2-201ENST00000443534 PLSCR2Q9NRY7 297 aa12.43□□□□□ -0.42
CUBNP2-201ENST00000443534 MAP3K13O43283 966 aa12.42□□□□□ -0.42
CUBNP2-201ENST00000443534 CHRM1P11229 460 aaPredicted RBP12.42□□□□□ -0.42
CUBNP2-201ENST00000443534 MS4A3Q96HJ5 214 aa12.4□□□□□ -0.42
CUBNP2-201ENST00000443534 SGIP1Q9BQI5 828 aa12.4□□□□□ -0.42
CUBNP2-201ENST00000443534 GALR2O43603 387 aaPredicted RBP12.39□□□□□ -0.43
CUBNP2-201ENST00000443534 PKD2Q13563 968 aa12.39□□□□□ -0.43
CUBNP2-201ENST00000443534 PCDHB13Q9Y5F0 798 aa12.37□□□□□ -0.43
CUBNP2-201ENST00000443534 IFNL1Q8IU54 200 aa12.33□□□□□ -0.44
CUBNP2-201ENST00000443534 ECM2O94769 699 aaPredicted RBP12.31□□□□□ -0.44
CUBNP2-201ENST00000443534 ZNF467Q7Z7K2 595 aaPredicted RBP12.31□□□□□ -0.44
CUBNP2-201ENST00000443534 POTEIP0CG38 1075 aa12.3□□□□□ -0.44
CUBNP2-201ENST00000443534 AMER1Q5JTC6 1135 aaPredicted RBP12.28□□□□□ -0.44
CUBNP2-201ENST00000443534 PCDHB8Q9UN66 801 aa12.28□□□□□ -0.44
CUBNP2-201ENST00000443534 RNF25Q96BH1 459 aaPredicted RBP12.27□□□□□ -0.45
CUBNP2-201ENST00000443534 TRPC6Q9Y210 931 aa12.27□□□□□ -0.45
CUBNP2-201ENST00000443534 DCBLD2Q96PD2 775 aa12.24□□□□□ -0.45
CUBNP2-201ENST00000443534 TIE1P35590 1138 aa12.23□□□□□ -0.45
CUBNP2-201ENST00000443534 RTN4Q9NQC3 1192 aaKnown RBP12.23□□□□□ -0.45
CUBNP2-201ENST00000443534 RIOK3O14730 519 aaKnown RBP12.22□□□□□ -0.45
CUBNP2-201ENST00000443534 RGL2O15211 777 aa12.21□□□□□ -0.45
CUBNP2-201ENST00000443534 BMP2KQ9NSY1 1161 aaPredicted RBP12.2□□□□□ -0.46
CUBNP2-201ENST00000443534 PDAP1Q13442 181 aaKnown RBP12.19□□□□□ -0.46
CUBNP2-201ENST00000443534 ASTLQ6HA08 431 aaPredicted RBP12.19□□□□□ -0.46
CUBNP2-201ENST00000443534 TTLL13PA6NNM8 815 aa12.17□□□□□ -0.46
CUBNP2-201ENST00000443534 ATMINO43313 823 aaPredicted RBP12.17□□□□□ -0.46
CUBNP2-201ENST00000443534 PSEN1P49768 467 aa12.16□□□□□ -0.46
CUBNP2-201ENST00000443534 TMEM106CQ9BVX2 250 aa12.16□□□□□ -0.46
CUBNP2-201ENST00000443534 VGFO15240 615 aaPredicted RBP12.15□□□□□ -0.46
CUBNP2-201ENST00000443534 ATN1P54259 1190 aaPredicted RBP12.13□□□□□ -0.47
CUBNP2-201ENST00000443534 TAOK2Q9UL54 1235 aa12.13□□□□□ -0.47
CUBNP2-201ENST00000443534 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.09□□□□□ -0.47
CUBNP2-201ENST00000443534 PELP1Q8IZL8 1130 aaKnown RBP12.09□□□□□ -0.47
CUBNP2-201ENST00000443534 ZFP91Q96JP5 570 aaPredicted RBP12.09□□□□□ -0.47
CUBNP2-201ENST00000443534 TRIM35Q9UPQ4 493 aa12.09□□□□□ -0.47
CUBNP2-201ENST00000443534 SLC39A7Q92504 469 aa12.03□□□□□ -0.48
CUBNP2-201ENST00000443534 STK25O00506 426 aa12.01□□□□□ -0.49
CUBNP2-201ENST00000443534 IER5LQ5T953 404 aa12.01□□□□□ -0.49
CUBNP2-201ENST00000443534 BCL11BQ9C0K0 894 aaPredicted RBP12.01□□□□□ -0.49
CUBNP2-201ENST00000443534 CABP2Q9NPB3 220 aa12.01□□□□□ -0.49
CUBNP2-201ENST00000443534 C7P10643 843 aa12□□□□□ -0.49
CUBNP2-201ENST00000443534 GOLGA2Q08379 1002 aa11.99□□□□□ -0.49
CUBNP2-201ENST00000443534 METRNQ9UJH8 293 aa11.99□□□□□ -0.49
CUBNP2-201ENST00000443534 STK24Q9Y6E0 443 aa11.98□□□□□ -0.49
CUBNP2-201ENST00000443534 HS6ST3Q8IZP7 471 aa11.97□□□□□ -0.49
CUBNP2-201ENST00000443534 OTUD5Q96G74 571 aa11.97□□□□□ -0.49
CUBNP2-201ENST00000443534 DCAF8L2P0C7V8 631 aa11.96□□□□□ -0.49
CUBNP2-201ENST00000443534 POTEMA6NI47 508 aa11.95□□□□□ -0.5
CUBNP2-201ENST00000443534 MKRN3Q13064 507 aaKnown RBP11.95□□□□□ -0.5
CUBNP2-201ENST00000443534 CHGAP10645 457 aaKnown RBP11.94□□□□□ -0.5
CUBNP2-201ENST00000443534 IRX5P78411 483 aaPredicted RBP11.93□□□□□ -0.5
CUBNP2-201ENST00000443534 EFCAB3Q8N7B9 438 aa11.93□□□□□ -0.5
CUBNP2-201ENST00000443534 POTEFA5A3E0 1075 aa11.91□□□□□ -0.5
CUBNP2-201ENST00000443534 SEC24BO95487 1268 aa11.9□□□□□ -0.5
CUBNP2-201ENST00000443534 COLQQ9Y215 455 aaPredicted RBP11.9□□□□□ -0.5
CUBNP2-201ENST00000443534 POTEB2H3BUK9 544 aa11.89□□□□□ -0.51
CUBNP2-201ENST00000443534 ILDR1Q86SU0 546 aaPredicted RBP11.89□□□□□ -0.51
CUBNP2-201ENST00000443534 ABCC9O60706 1549 aa11.88□□□□□ -0.51
CUBNP2-201ENST00000443534 PLCG2P16885 1265 aa11.88□□□□□ -0.51
CUBNP2-201ENST00000443534 POTEGQ6S5H5 508 aa11.88□□□□□ -0.51
CUBNP2-201ENST00000443534 DNAJC5Q9H3Z4 198 aa11.88□□□□□ -0.51
CUBNP2-201ENST00000443534 OCEL1Q9H607 264 aa11.88□□□□□ -0.51
CUBNP2-201ENST00000443534 SOX12O15370 315 aa11.87□□□□□ -0.51
CUBNP2-201ENST00000443534 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.87□□□□□ -0.51
CUBNP2-201ENST00000443534 PDCD7Q8N8D1 485 aaKnown RBP11.86□□□□□ -0.51
CUBNP2-201ENST00000443534 MFRPQ9BY79 579 aa11.82□□□□□ -0.52
CUBNP2-201ENST00000443534 PHF8Q9UPP1 1060 aa11.82□□□□□ -0.52
CUBNP2-201ENST00000443534 NLRP6P59044 892 aa11.8□□□□□ -0.52
CUBNP2-201ENST00000443534 NKX1-1Q15270 411 aaPredicted RBP11.8□□□□□ -0.52
CUBNP2-201ENST00000443534 FBXO22Q8NEZ5 403 aa11.8□□□□□ -0.52
CUBNP2-201ENST00000443534 MS4A4AQ96JQ5 239 aa11.78□□□□□ -0.52
CUBNP2-201ENST00000443534 POTEJP0CG39 1038 aa11.75□□□□□ -0.53
CUBNP2-201ENST00000443534 DPY19L2Q6NUT2 758 aa11.75□□□□□ -0.53
CUBNP2-201ENST00000443534 PCDH10Q9P2E7 1040 aa11.75□□□□□ -0.53
CUBNP2-201ENST00000443534 BBXQ8WY36 941 aaPredicted RBP11.73□□□□□ -0.53
CUBNP2-201ENST00000443534 L3MBTL3Q96JM7 780 aaPredicted RBP11.72□□□□□ -0.53
CUBNP2-201ENST00000443534 RYDENQ9NUL5 291 aaKnown RBP11.7□□□□□ -0.54
CUBNP2-201ENST00000443534 MAMSTRQ6ZN01 415 aa11.68□□□□□ -0.54
CUBNP2-201ENST00000443534 BOLA1Q9Y3E2 137 aa11.68□□□□□ -0.54
CUBNP2-201ENST00000443534 ZCCHC6Q5VYS8 1495 aaKnown RBP11.66□□□□□ -0.54
CUBNP2-201ENST00000443534 GTPBP6O43824 516 aaPredicted RBP11.66□□□□□ -0.54
CUBNP2-201ENST00000443534 SCUBE2Q9NQ36 999 aa11.66□□□□□ -0.54
CUBNP2-201ENST00000443534 TMEM121BQ9BXQ6 578 aaPredicted RBP11.65□□□□□ -0.54
CUBNP2-201ENST00000443534 G3V3G9 751 aa11.64□□□□□ -0.55
CUBNP2-201ENST00000443534 MICALL2Q8IY33 904 aa11.64□□□□□ -0.55
CUBNP2-201ENST00000443534 PPP1R37O75864 691 aa11.63□□□□□ -0.55
CUBNP2-201ENST00000443534 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 654.3 ms