RNA–Protein interactions for RNA: ENST00000441679.1

EPHA4-208, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 565 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-208ENST00000441679 NPM1P06748 294 aaKnown RBP eCLIP14.01□□□□□ -0.17
EPHA4-208ENST00000441679 DCAF8Q5TAQ9 597 aa13.99□□□□□ -0.17
EPHA4-208ENST00000441679 PITPNM1O00562 1244 aa13.97□□□□□ -0.17
EPHA4-208ENST00000441679 FAM212AQ96EL1 285 aa13.97□□□□□ -0.17
EPHA4-208ENST00000441679 CHGAP10645 457 aaKnown RBP13.96□□□□□ -0.17
EPHA4-208ENST00000441679 RB1CC1Q8TDY2 1594 aa13.96□□□□□ -0.18
EPHA4-208ENST00000441679 MNX1P50219 401 aaPredicted RBP13.94□□□□□ -0.18
EPHA4-208ENST00000441679 PAXIP1Q6ZW49 1069 aaPredicted RBP13.94□□□□□ -0.18
EPHA4-208ENST00000441679 CFAP44Q96MT7 982 aa13.92□□□□□ -0.18
EPHA4-208ENST00000441679 TAOK2Q9UL54 1235 aa13.91□□□□□ -0.18
EPHA4-208ENST00000441679 VSIG10Q8N0Z9 540 aa13.89□□□□□ -0.19
EPHA4-208ENST00000441679 SPRYD3Q8NCJ5 442 aa13.89□□□□□ -0.19
EPHA4-208ENST00000441679 HS6ST3Q8IZP7 471 aa13.86□□□□□ -0.19
EPHA4-208ENST00000441679 RNF25Q96BH1 459 aaPredicted RBP13.85□□□□□ -0.19
EPHA4-208ENST00000441679 RIOK3O14730 519 aaKnown RBP13.84□□□□□ -0.19
EPHA4-208ENST00000441679 CHRDL2Q6WN34 429 aa13.84□□□□□ -0.19
EPHA4-208ENST00000441679 RASEFQ8IZ41 740 aa13.84□□□□□ -0.19
EPHA4-208ENST00000441679 CHRM1P11229 460 aaPredicted RBP13.8□□□□□ -0.2
EPHA4-208ENST00000441679 VGFO15240 615 aaPredicted RBP13.76□□□□□ -0.21
EPHA4-208ENST00000441679 DNAJC5Q9H3Z4 198 aa13.74□□□□□ -0.21
EPHA4-208ENST00000441679 CHADLQ6NUI6 762 aa13.73□□□□□ -0.21
EPHA4-208ENST00000441679 PYGBP11216 843 aa13.71□□□□□ -0.21
EPHA4-208ENST00000441679 STK25O00506 426 aa13.7□□□□□ -0.22
EPHA4-208ENST00000441679 POTEHQ6S545 545 aa13.7□□□□□ -0.22
EPHA4-208ENST00000441679 BCANQ96GW7 911 aa13.69□□□□□ -0.22
EPHA4-208ENST00000441679 FARP1Q9Y4F1 1045 aaPredicted RBP13.68□□□□□ -0.22
EPHA4-208ENST00000441679 SGIP1Q9BQI5 828 aa13.66□□□□□ -0.22
EPHA4-208ENST00000441679 TSHZ2Q9NRE2 1034 aa13.66□□□□□ -0.22
EPHA4-208ENST00000441679 KDM2AQ9Y2K7 1162 aa13.66□□□□□ -0.22
EPHA4-208ENST00000441679 PRKAR2AP13861 404 aaKnown RBP13.65□□□□□ -0.22
EPHA4-208ENST00000441679 TSPYL2Q9H2G4 693 aaPredicted RBP13.64□□□□□ -0.23
EPHA4-208ENST00000441679 PIP4P2Q8N4L2 257 aa13.63□□□□□ -0.23
EPHA4-208ENST00000441679 FXR2P51116 673 aaKnown RBP eCLIP13.62□□□□□ -0.23
EPHA4-208ENST00000441679 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.61□□□□□ -0.23
EPHA4-208ENST00000441679 ZFP91Q96JP5 570 aaPredicted RBP13.61□□□□□ -0.23
EPHA4-208ENST00000441679 STK24Q9Y6E0 443 aa13.61□□□□□ -0.23
EPHA4-208ENST00000441679 NKX1-1Q15270 411 aaPredicted RBP13.6□□□□□ -0.23
EPHA4-208ENST00000441679 BCL11BQ9C0K0 894 aaPredicted RBP13.6□□□□□ -0.23
EPHA4-208ENST00000441679 ZNF467Q7Z7K2 595 aaPredicted RBP13.59□□□□□ -0.23
EPHA4-208ENST00000441679 RYDENQ9NUL5 291 aaKnown RBP13.56□□□□□ -0.24
EPHA4-208ENST00000441679 GTPBP6O43824 516 aaPredicted RBP13.55□□□□□ -0.24
EPHA4-208ENST00000441679 PAK3O75914 559 aaPredicted RBP13.55□□□□□ -0.24
EPHA4-208ENST00000441679 SCRIBQ14160 1630 aa13.53□□□□□ -0.24
EPHA4-208ENST00000441679 SHROOM4Q9ULL8 1493 aa13.51□□□□□ -0.25
EPHA4-208ENST00000441679 CCDC61Q9Y6R9 512 aa13.5□□□□□ -0.25
EPHA4-208ENST00000441679 PDAP1Q13442 181 aaKnown RBP13.48□□□□□ -0.25
EPHA4-208ENST00000441679 ZNF579Q8NAF0 562 aaKnown RBP13.44□□□□□ -0.26
EPHA4-208ENST00000441679 PCDHB8Q9UN66 801 aa13.44□□□□□ -0.26
EPHA4-208ENST00000441679 PCDHB13Q9Y5F0 798 aa13.44□□□□□ -0.26
EPHA4-208ENST00000441679 PSEN1P49768 467 aa13.39□□□□□ -0.27
EPHA4-208ENST00000441679 UNC13AQ9UPW8 1703 aa13.38□□□□□ -0.27
EPHA4-208ENST00000441679 BICRAQ9NZM4 1560 aa13.33□□□□□ -0.28
EPHA4-208ENST00000441679 NBR1Q14596 966 aa13.33□□□□□ -0.28
EPHA4-208ENST00000441679 KIF12Q96FN5 646 aa13.33□□□□□ -0.28
EPHA4-208ENST00000441679 MAP3K13O43283 966 aa13.32□□□□□ -0.28
EPHA4-208ENST00000441679 IFNL1Q8IU54 200 aa13.32□□□□□ -0.28
EPHA4-208ENST00000441679 ZRANB1Q9UGI0 708 aa13.31□□□□□ -0.28
EPHA4-208ENST00000441679 CD44P16070 742 aaKnown RBP13.3□□□□□ -0.28
EPHA4-208ENST00000441679 HAX1O00165 279 aa13.24□□□□□ -0.29
EPHA4-208ENST00000441679 MFRPQ9BY79 579 aa13.24□□□□□ -0.29
EPHA4-208ENST00000441679 PRKCSHP14314 528 aaPredicted RBP13.22□□□□□ -0.29
EPHA4-208ENST00000441679 CABP2Q9NPB3 220 aa13.22□□□□□ -0.29
EPHA4-208ENST00000441679 TPRNQ4KMQ1 711 aa13.21□□□□□ -0.29
EPHA4-208ENST00000441679 SOX12O15370 315 aa13.2□□□□□ -0.3
EPHA4-208ENST00000441679 EFCAB3Q8N7B9 438 aa13.2□□□□□ -0.3
EPHA4-208ENST00000441679 PHF12Q96QT6 1004 aa13.2□□□□□ -0.3
EPHA4-208ENST00000441679 NLRP6P59044 892 aa13.19□□□□□ -0.3
EPHA4-208ENST00000441679 C19orf67A6NJJ6 358 aa13.17□□□□□ -0.3
EPHA4-208ENST00000441679 P3H3Q8IVL6 736 aa13.17□□□□□ -0.3
EPHA4-208ENST00000441679 WDR70Q9NW82 654 aa13.17□□□□□ -0.3
EPHA4-208ENST00000441679 BAZ1AQ9NRL2 1556 aaPredicted RBP13.16□□□□□ -0.3
EPHA4-208ENST00000441679 EVX2Q03828 476 aa13.16□□□□□ -0.3
EPHA4-208ENST00000441679 GOLGA2Q08379 1002 aa13.13□□□□□ -0.31
EPHA4-208ENST00000441679 FBXO22Q8NEZ5 403 aa13.13□□□□□ -0.31
EPHA4-208ENST00000441679 CADPS2Q86UW7 1296 aa13.12□□□□□ -0.31
EPHA4-208ENST00000441679 PHF8Q9UPP1 1060 aa13.12□□□□□ -0.31
EPHA4-208ENST00000441679 TMEM106CQ9BVX2 250 aa13.09□□□□□ -0.31
EPHA4-208ENST00000441679 MS4A3Q96HJ5 214 aa13.08□□□□□ -0.32
EPHA4-208ENST00000441679 PPP1R37O75864 691 aa13.07□□□□□ -0.32
EPHA4-208ENST00000441679 CECR2Q9BXF3 1484 aa13.07□□□□□ -0.32
EPHA4-208ENST00000441679 SP7Q8TDD2 431 aaPredicted RBP13.06□□□□□ -0.32
EPHA4-208ENST00000441679 EIF4G1Q04637 1599 aaKnown RBP13.04□□□□□ -0.32
EPHA4-208ENST00000441679 RSF1Q96T23 1441 aaPredicted RBP13.04□□□□□ -0.32
EPHA4-208ENST00000441679 MKRN3Q13064 507 aaKnown RBP13.03□□□□□ -0.32
EPHA4-208ENST00000441679 SUPT5HO00267 1087 aaKnown RBP13.02□□□□□ -0.33
EPHA4-208ENST00000441679 SMARCA4P51532 1647 aa13.02□□□□□ -0.33
EPHA4-208ENST00000441679 SMARCA2P51531 1590 aa13.01□□□□□ -0.33
EPHA4-208ENST00000441679 TIE1P35590 1138 aa13□□□□□ -0.33
EPHA4-208ENST00000441679 KCNV2Q8TDN2 545 aa13□□□□□ -0.33
EPHA4-208ENST00000441679 TRPC6Q9Y210 931 aa12.99□□□□□ -0.33
EPHA4-208ENST00000441679 MROH2BQ7Z745 1585 aa12.98□□□□□ -0.33
EPHA4-208ENST00000441679 MS4A4AQ96JQ5 239 aa12.97□□□□□ -0.33
EPHA4-208ENST00000441679 NCAPD3P42695 1498 aa12.96□□□□□ -0.34
EPHA4-208ENST00000441679 PEG3Q9GZU2 1588 aa12.94□□□□□ -0.34
EPHA4-208ENST00000441679 ATAD2BQ9ULI0 1458 aa12.94□□□□□ -0.34
EPHA4-208ENST00000441679 TTLL13PA6NNM8 815 aa12.93□□□□□ -0.34
EPHA4-208ENST00000441679 CLCN6P51797 869 aa12.93□□□□□ -0.34
EPHA4-208ENST00000441679 E2F4Q16254 413 aa12.93□□□□□ -0.34
EPHA4-208ENST00000441679 PDE4AP27815 886 aa12.92□□□□□ -0.34
EPHA4-208ENST00000441679 ARHGEF1Q92888 912 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms