RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 TNIKQ9UKE5 1360 aa20.13■□□□□ 0.81
TSC2-206ENST00000439117 HSP90AA1P07900 732 aaKnown RBP20.12■□□□□ 0.81
TSC2-206ENST00000439117 MROH2BQ7Z745 1585 aa20.11■□□□□ 0.81
TSC2-206ENST00000439117 BCL11AQ9H165 835 aa20.11■□□□□ 0.81
TSC2-206ENST00000439117 DDX10Q13206 875 aaKnown RBP20.11■□□□□ 0.81
TSC2-206ENST00000439117 NEFMP07197 916 aa20.1■□□□□ 0.81
TSC2-206ENST00000439117 KCNH8Q96L42 1107 aa20.08■□□□□ 0.81
TSC2-206ENST00000439117 SMARCA2P51531 1590 aa20.03■□□□□ 0.8
TSC2-206ENST00000439117 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.8
TSC2-206ENST00000439117 RRP7BPQ9NSQ0 103 aa20.02■□□□□ 0.8
TSC2-206ENST00000439117 CCDC88BA6NC98 1476 aa20.01■□□□□ 0.79
TSC2-206ENST00000439117 ERICH6BQ5W0A0 696 aa20.01■□□□□ 0.79
TSC2-206ENST00000439117 FAM9BQ8IZU0 186 aa20.01■□□□□ 0.79
TSC2-206ENST00000439117 DDRGK1Q96HY6 314 aa20■□□□□ 0.79
TSC2-206ENST00000439117 CUX2O14529 1486 aa19.98■□□□□ 0.79
TSC2-206ENST00000439117 CARMIL1Q5VZK9 1371 aa19.97■□□□□ 0.79
TSC2-206ENST00000439117 SLC24A1O60721 1099 aa19.96■□□□□ 0.79
TSC2-206ENST00000439117 CFDP1Q9UEE9 299 aaPredicted RBP19.96■□□□□ 0.79
TSC2-206ENST00000439117 KDM2AQ9Y2K7 1162 aa19.95■□□□□ 0.78
TSC2-206ENST00000439117 TNNT2P45379 298 aaPredicted RBP19.94■□□□□ 0.78
TSC2-206ENST00000439117 PPM1GO15355 546 aaPredicted RBP19.94■□□□□ 0.78
TSC2-206ENST00000439117 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.94■□□□□ 0.78
TSC2-206ENST00000439117 SOGA1O94964 1423 aa19.93■□□□□ 0.78
TSC2-206ENST00000439117 TRIM44Q96DX7 344 aaPredicted RBP19.91■□□□□ 0.78
TSC2-206ENST00000439117 ARXQ96QS3 562 aa19.91■□□□□ 0.78
TSC2-206ENST00000439117 PDS5BQ9NTI5 1447 aa19.9■□□□□ 0.78
TSC2-206ENST00000439117 IRX6P78412 446 aaPredicted RBP19.86■□□□□ 0.77
TSC2-206ENST00000439117 MRS2Q9HD23 443 aa19.86■□□□□ 0.77
TSC2-206ENST00000439117 FHAD1B1AJZ9 1412 aa19.85■□□□□ 0.77
TSC2-206ENST00000439117 BECN1Q14457 450 aa19.85■□□□□ 0.77
TSC2-206ENST00000439117 TMC1Q8TDI8 760 aa19.85■□□□□ 0.77
TSC2-206ENST00000439117 TOP2AP11388 1531 aaKnown RBP19.82■□□□□ 0.76
TSC2-206ENST00000439117 ABCC8Q09428 1581 aa19.8■□□□□ 0.76
TSC2-206ENST00000439117 SUPT16HQ9Y5B9 1047 aaKnown RBP19.79■□□□□ 0.76
TSC2-206ENST00000439117 NOP58Q9Y2X3 529 aaKnown RBP19.79■□□□□ 0.76
TSC2-206ENST00000439117 EIF4G2P78344 907 aaKnown RBP eCLIP19.79■□□□□ 0.76
TSC2-206ENST00000439117 EIF4G1Q04637 1599 aaKnown RBP19.78■□□□□ 0.76
TSC2-206ENST00000439117 CADPSQ9ULU8 1353 aa19.77■□□□□ 0.76
TSC2-206ENST00000439117 WIZO95785 1651 aa19.77■□□□□ 0.76
TSC2-206ENST00000439117 RTN4Q9NQC3 1192 aaKnown RBP19.76■□□□□ 0.75
TSC2-206ENST00000439117 ATAD2BQ9ULI0 1458 aa19.75■□□□□ 0.75
TSC2-206ENST00000439117 TDRD9Q8NDG6 1382 aaKnown RBP19.74■□□□□ 0.75
TSC2-206ENST00000439117 NAP1L5Q96NT1 182 aaPredicted RBP19.74■□□□□ 0.75
TSC2-206ENST00000439117 CCNB3Q8WWL7 1395 aa19.74■□□□□ 0.75
TSC2-206ENST00000439117 RGL3Q3MIN7 710 aa19.73■□□□□ 0.75
TSC2-206ENST00000439117 DEKP35659 375 aaKnown RBP19.73■□□□□ 0.75
TSC2-206ENST00000439117 SALL2Q9Y467 1007 aaPredicted RBP19.73■□□□□ 0.75
TSC2-206ENST00000439117 HIRIP3Q9BW71 556 aaPredicted RBP19.72■□□□□ 0.75
TSC2-206ENST00000439117 PPP4R2Q9NY27 417 aa19.71■□□□□ 0.75
TSC2-206ENST00000439117 PPP1R15AO75807 674 aaPredicted RBP19.71■□□□□ 0.75
TSC2-206ENST00000439117 GOLGA6L22H0YM25 854 aa19.71■□□□□ 0.75
TSC2-206ENST00000439117 ARID4BQ4LE39 1312 aaPredicted RBP19.67■□□□□ 0.74
TSC2-206ENST00000439117 WDR43Q15061 677 aaKnown RBP eCLIP19.65■□□□□ 0.74
TSC2-206ENST00000439117 VPS8Q8N3P4 1428 aa19.65■□□□□ 0.74
TSC2-206ENST00000439117 SMARCA4P51532 1647 aa19.65■□□□□ 0.74
TSC2-206ENST00000439117 CARMIL2Q6F5E8 1435 aa19.64■□□□□ 0.73
TSC2-206ENST00000439117 SENP3Q9H4L4 574 aaPredicted RBP19.62■□□□□ 0.73
TSC2-206ENST00000439117 RBM19Q9Y4C8 960 aaKnown RBP19.62■□□□□ 0.73
TSC2-206ENST00000439117 LAS1LQ9Y4W2 734 aaKnown RBP19.6■□□□□ 0.73
TSC2-206ENST00000439117 NCLP19338 710 aaKnown RBP19.58■□□□□ 0.72
TSC2-206ENST00000439117 SIN3AQ96ST3 1273 aa19.56■□□□□ 0.72
TSC2-206ENST00000439117 CARD11Q9BXL7 1154 aa19.55■□□□□ 0.72
TSC2-206ENST00000439117 PTMAP06454 111 aaKnown RBP19.55■□□□□ 0.72
TSC2-206ENST00000439117 FMN1Q68DA7 1419 aa19.55■□□□□ 0.72
TSC2-206ENST00000439117 CDK11BP21127 795 aaKnown RBP19.55■□□□□ 0.72
TSC2-206ENST00000439117 CDCA8Q53HL2 280 aa19.55■□□□□ 0.72
TSC2-206ENST00000439117 DNTTIP2Q5QJE6 756 aaKnown RBP19.53■□□□□ 0.72
TSC2-206ENST00000439117 KANK4Q5T7N3 995 aaPredicted RBP19.53■□□□□ 0.72
TSC2-206ENST00000439117 ARHGAP35Q9NRY4 1499 aa19.51■□□□□ 0.71
TSC2-206ENST00000439117 L1TD1Q5T7N2 865 aaKnown RBP19.51■□□□□ 0.71
TSC2-206ENST00000439117 RAPGEF2Q9Y4G8 1499 aa19.5■□□□□ 0.71
TSC2-206ENST00000439117 C14orf37Q86TY3 774 aa19.49■□□□□ 0.71
TSC2-206ENST00000439117 FANCD2Q9BXW9 1451 aa19.47■□□□□ 0.71
TSC2-206ENST00000439117 MYH16Q9H6N6 1097 aa19.47■□□□□ 0.71
TSC2-206ENST00000439117 KANK1Q14678 1352 aa19.45■□□□□ 0.7
TSC2-206ENST00000439117 KNSTRNQ9Y448 316 aa19.45■□□□□ 0.7
TSC2-206ENST00000439117 TSHZ2Q9NRE2 1034 aa19.43■□□□□ 0.7
TSC2-206ENST00000439117 SETD5Q9C0A6 1442 aa19.43■□□□□ 0.7
TSC2-206ENST00000439117 TRHP20396 242 aaPredicted RBP19.42■□□□□ 0.7
TSC2-206ENST00000439117 TIMELESSQ9UNS1 1208 aa19.42■□□□□ 0.7
TSC2-206ENST00000439117 EFCAB2Q5VUJ9 269 aa19.42■□□□□ 0.7
TSC2-206ENST00000439117 B4GALNT3Q6L9W6 998 aa19.4■□□□□ 0.7
TSC2-206ENST00000439117 JPH4Q96JJ6 628 aa19.4■□□□□ 0.7
TSC2-206ENST00000439117 CFAP53Q96M91 514 aa19.39■□□□□ 0.69
TSC2-206ENST00000439117 POGKQ9P215 609 aa19.39■□□□□ 0.69
TSC2-206ENST00000439117 DCAF11Q8TEB1 546 aa19.39■□□□□ 0.69
TSC2-206ENST00000439117 FHOD3Q2V2M9 1422 aa19.38■□□□□ 0.69
TSC2-206ENST00000439117 ZBTB7CA1YPR0 619 aa19.36■□□□□ 0.69
TSC2-206ENST00000439117 PLEKHG5O94827 1062 aa19.36■□□□□ 0.69
TSC2-206ENST00000439117 MLECQ14165 292 aa19.35■□□□□ 0.69
TSC2-206ENST00000439117 CCER2I3L3R5 266 aa19.34■□□□□ 0.69
TSC2-206ENST00000439117 GGT6Q6P531 493 aa19.34■□□□□ 0.69
TSC2-206ENST00000439117 PKD2Q13563 968 aa19.34■□□□□ 0.69
TSC2-206ENST00000439117 PNNQ9H307 717 aaKnown RBP19.33■□□□□ 0.68
TSC2-206ENST00000439117 MSNP26038 577 aaKnown RBP19.33■□□□□ 0.68
TSC2-206ENST00000439117 NCAPD3P42695 1498 aa19.33■□□□□ 0.68
TSC2-206ENST00000439117 ANKRD30AQ9BXX3 1397 aa19.3■□□□□ 0.68
TSC2-206ENST00000439117 RUSC2Q8N2Y8 1516 aa19.29■□□□□ 0.68
TSC2-206ENST00000439117 HDGFP51858 240 aaKnown RBP19.29■□□□□ 0.68
TSC2-206ENST00000439117 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms