RNA–Protein interactions for RNA: ENST00000438885.2

LINC01649-201, Transcript of long intergenic non-protein coding RNA 1649, humanhuman

TSL 5

Gene LINC01649, Length 1,498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01649-201ENST00000438885 C7P10643 843 aa11.19□□□□□ -0.62
LINC01649-201ENST00000438885 ASTLQ6HA08 431 aaPredicted RBP11.18□□□□□ -0.62
LINC01649-201ENST00000438885 FAM163AQ96GL9 167 aaPredicted RBP11.14□□□□□ -0.63
LINC01649-201ENST00000438885 ATMINO43313 823 aaPredicted RBP11.13□□□□□ -0.63
LINC01649-201ENST00000438885 POTEJP0CG39 1038 aa11.12□□□□□ -0.63
LINC01649-201ENST00000438885 MS4A3Q96HJ5 214 aa11.12□□□□□ -0.63
LINC01649-201ENST00000438885 SCUBE2Q9NQ36 999 aa11.12□□□□□ -0.63
LINC01649-201ENST00000438885 LCE2DQ5TA82 110 aaPredicted RBP11.08□□□□□ -0.64
LINC01649-201ENST00000438885 MNX1P50219 401 aaPredicted RBP11.06□□□□□ -0.64
LINC01649-201ENST00000438885 SPDYE4A6NLX3 237 aa11.05□□□□□ -0.64
LINC01649-201ENST00000438885 ATN1P54259 1190 aaPredicted RBP11□□□□□ -0.65
LINC01649-201ENST00000438885 TSPYL2Q9H2G4 693 aaPredicted RBP10.95□□□□□ -0.66
LINC01649-201ENST00000438885 CDAN1Q8IWY9 1227 aa10.93□□□□□ -0.66
LINC01649-201ENST00000438885 CCDC61Q9Y6R9 512 aa10.9□□□□□ -0.66
LINC01649-201ENST00000438885 POTEFA5A3E0 1075 aa10.89□□□□□ -0.67
LINC01649-201ENST00000438885 BMP2KQ9NSY1 1161 aaPredicted RBP10.89□□□□□ -0.67
LINC01649-201ENST00000438885 KIF12Q96FN5 646 aa10.88□□□□□ -0.67
LINC01649-201ENST00000438885 SEC24BO95487 1268 aa10.87□□□□□ -0.67
LINC01649-201ENST00000438885 TIE1P35590 1138 aa10.85□□□□□ -0.67
LINC01649-201ENST00000438885 TRPC6Q9Y210 931 aa10.81□□□□□ -0.68
LINC01649-201ENST00000438885 PROM2Q8N271 834 aa10.8□□□□□ -0.68
LINC01649-201ENST00000438885 MAP3K13O43283 966 aa10.79□□□□□ -0.68
LINC01649-201ENST00000438885 COLQQ9Y215 455 aaPredicted RBP10.79□□□□□ -0.68
LINC01649-201ENST00000438885 TTLL13PA6NNM8 815 aa10.75□□□□□ -0.69
LINC01649-201ENST00000438885 ST18O60284 1047 aa10.74□□□□□ -0.69
LINC01649-201ENST00000438885 IER5LQ5T953 404 aa10.74□□□□□ -0.69
LINC01649-201ENST00000438885 SLAIN1Q8ND83 568 aa10.74□□□□□ -0.69
LINC01649-201ENST00000438885 PLEKHG5O94827 1062 aa10.73□□□□□ -0.69
LINC01649-201ENST00000438885 MMRN1Q13201 1228 aa10.7□□□□□ -0.7
LINC01649-201ENST00000438885 TRIM35Q9UPQ4 493 aa10.7□□□□□ -0.7
LINC01649-201ENST00000438885 SPNS2Q8IVW8 549 aa10.67□□□□□ -0.7
LINC01649-201ENST00000438885 RASEFQ8IZ41 740 aa10.66□□□□□ -0.7
LINC01649-201ENST00000438885 SGIP1Q9BQI5 828 aa10.65□□□□□ -0.7
LINC01649-201ENST00000438885 PCDHB13Q9Y5F0 798 aa10.63□□□□□ -0.71
LINC01649-201ENST00000438885 MIER1Q8N108 512 aa10.62□□□□□ -0.71
LINC01649-201ENST00000438885 TMEM121BQ9BXQ6 578 aaPredicted RBP10.62□□□□□ -0.71
LINC01649-201ENST00000438885 PLCG2P16885 1265 aa10.61□□□□□ -0.71
LINC01649-201ENST00000438885 SNPHO15079 494 aa10.58□□□□□ -0.72
LINC01649-201ENST00000438885 TMEM106CQ9BVX2 250 aa10.55□□□□□ -0.72
LINC01649-201ENST00000438885 IFNL1Q8IU54 200 aa10.52□□□□□ -0.73
LINC01649-201ENST00000438885 MARVELD3Q96A59 401 aa10.51□□□□□ -0.73
LINC01649-201ENST00000438885 IRX5P78411 483 aaPredicted RBP10.5□□□□□ -0.73
LINC01649-201ENST00000438885 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.5□□□□□ -0.73
LINC01649-201ENST00000438885 ZBTB47Q9UFB7 747 aaPredicted RBP10.5□□□□□ -0.73
LINC01649-201ENST00000438885 PLCD3Q8N3E9 789 aa10.47□□□□□ -0.73
LINC01649-201ENST00000438885 OCEL1Q9H607 264 aa10.47□□□□□ -0.73
LINC01649-201ENST00000438885 FAM212AQ96EL1 285 aa10.42□□□□□ -0.74
LINC01649-201ENST00000438885 EMP3P54852 163 aa10.42□□□□□ -0.74
LINC01649-201ENST00000438885 NUBP1P53384 320 aa10.41□□□□□ -0.74
LINC01649-201ENST00000438885 C3orf67Q6ZVT6 689 aa10.35□□□□□ -0.75
LINC01649-201ENST00000438885 HS3ST6Q96QI5 342 aa10.34□□□□□ -0.75
LINC01649-201ENST00000438885 FAM205CA6NFA0 338 aa10.33□□□□□ -0.76
LINC01649-201ENST00000438885 KRTAP3-3Q9BYR6 98 aa10.33□□□□□ -0.76
LINC01649-201ENST00000438885 KRTAP3-2Q9BYR7 98 aa10.33□□□□□ -0.76
LINC01649-201ENST00000438885 FKBP8Q14318 412 aa10.29□□□□□ -0.76
LINC01649-201ENST00000438885 L3MBTL3Q96JM7 780 aaPredicted RBP10.29□□□□□ -0.76
LINC01649-201ENST00000438885 POTEB3A0JP26 581 aa10.28□□□□□ -0.76
LINC01649-201ENST00000438885 POTEBQ6S5H4 581 aa10.28□□□□□ -0.76
LINC01649-201ENST00000438885 PYGBP11216 843 aa10.26□□□□□ -0.77
LINC01649-201ENST00000438885 DCAF8Q5TAQ9 597 aa10.25□□□□□ -0.77
LINC01649-201ENST00000438885 GOLGA2Q08379 1002 aa10.24□□□□□ -0.77
LINC01649-201ENST00000438885 PDCD7Q8N8D1 485 aaKnown RBP10.24□□□□□ -0.77
LINC01649-201ENST00000438885 PCDHB8Q9UN66 801 aa10.24□□□□□ -0.77
LINC01649-201ENST00000438885 MKRN3Q13064 507 aaKnown RBP10.23□□□□□ -0.77
LINC01649-201ENST00000438885 FBXO3Q9UK99 471 aa10.2□□□□□ -0.78
LINC01649-201ENST00000438885 RNF166Q96A37 237 aaPredicted RBP10.17□□□□□ -0.78
LINC01649-201ENST00000438885 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.16□□□□□ -0.78
LINC01649-201ENST00000438885 ZNF467Q7Z7K2 595 aaPredicted RBP10.13□□□□□ -0.79
LINC01649-201ENST00000438885 ZNF710Q8N1W2 664 aa10.11□□□□□ -0.79
LINC01649-201ENST00000438885 ERBB3P21860 1342 aa10.11□□□□□ -0.79
LINC01649-201ENST00000438885 G3V3G9 751 aa10.1□□□□□ -0.79
LINC01649-201ENST00000438885 GSE1Q14687 1217 aa10.1□□□□□ -0.79
LINC01649-201ENST00000438885 HOXB1P14653 301 aaPredicted RBP10.08□□□□□ -0.8
LINC01649-201ENST00000438885 MYT1LQ9UL68 1186 aa10.08□□□□□ -0.8
LINC01649-201ENST00000438885 HOXB3P14651 431 aaPredicted RBP10.07□□□□□ -0.8
LINC01649-201ENST00000438885 DOK7Q18PE1 504 aa10.05□□□□□ -0.8
LINC01649-201ENST00000438885 PSEN1P49768 467 aa10.04□□□□□ -0.8
LINC01649-201ENST00000438885 CHRM1P11229 460 aaPredicted RBP10.03□□□□□ -0.8
LINC01649-201ENST00000438885 VASPP50552 380 aaPredicted RBP10.03□□□□□ -0.8
LINC01649-201ENST00000438885 BOLA1Q9Y3E2 137 aa10.03□□□□□ -0.8
LINC01649-201ENST00000438885 RIMBP2O15034 1052 aa10.01□□□□□ -0.81
LINC01649-201ENST00000438885 DPY19L2Q6NUT2 758 aa10.01□□□□□ -0.81
LINC01649-201ENST00000438885 ILDR1Q86SU0 546 aaPredicted RBP10.01□□□□□ -0.81
LINC01649-201ENST00000438885 KLHL34Q8N239 644 aa10.01□□□□□ -0.81
LINC01649-201ENST00000438885 VARS2Q5ST30 1063 aaKnown RBP10□□□□□ -0.81
LINC01649-201ENST00000438885 PTGER2P43116 358 aa9.98□□□□□ -0.81
LINC01649-201ENST00000438885 PDAP1Q13442 181 aaKnown RBP9.94□□□□□ -0.82
LINC01649-201ENST00000438885 ZNF687Q8N1G0 1237 aa9.93□□□□□ -0.82
LINC01649-201ENST00000438885 CABP2Q9NPB3 220 aa9.92□□□□□ -0.82
LINC01649-201ENST00000438885 ZSWIM6Q9HCJ5 1215 aa9.9□□□□□ -0.83
LINC01649-201ENST00000438885 ANKRD13DQ6ZTN6 518 aa9.85□□□□□ -0.83
LINC01649-201ENST00000438885 SPOCK2Q92563 424 aa9.85□□□□□ -0.83
LINC01649-201ENST00000438885 GPR153Q6NV75 609 aa9.8□□□□□ -0.84
LINC01649-201ENST00000438885 CIZ1Q9ULV3 898 aaPredicted RBP9.79□□□□□ -0.84
LINC01649-201ENST00000438885 TRIM41Q8WV44 630 aa9.79□□□□□ -0.84
LINC01649-201ENST00000438885 PLA2G2EQ9NZK7 142 aa9.79□□□□□ -0.84
LINC01649-201ENST00000438885 IFNLR1Q8IU57 520 aaPredicted RBP9.78□□□□□ -0.84
LINC01649-201ENST00000438885 LSM11P83369 360 aaKnown RBP eCLIP9.75□□□□□ -0.85
LINC01649-201ENST00000438885 MICALL2Q8IY33 904 aa9.74□□□□□ -0.85
LINC01649-201ENST00000438885 NISCHQ9Y2I1 1504 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms