RNA–Protein interactions for RNA: ENST00000438819.1

CLIP4-206, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 4

Gene CLIP4, Length 562 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-206ENST00000438819 HAX1O00165 279 aa11.78□□□□□ -0.52
CLIP4-206ENST00000438819 BCANQ96GW7 911 aa11.78□□□□□ -0.52
CLIP4-206ENST00000438819 KDM2AQ9Y2K7 1162 aa11.74□□□□□ -0.53
CLIP4-206ENST00000438819 SPRYD3Q8NCJ5 442 aa11.73□□□□□ -0.53
CLIP4-206ENST00000438819 TRIM41Q8WV44 630 aa11.72□□□□□ -0.53
CLIP4-206ENST00000438819 CHGAP10645 457 aaKnown RBP11.71□□□□□ -0.53
CLIP4-206ENST00000438819 FARP1Q9Y4F1 1045 aaPredicted RBP11.68□□□□□ -0.54
CLIP4-206ENST00000438819 CREBZFQ9NS37 354 aa11.67□□□□□ -0.54
CLIP4-206ENST00000438819 GSE1Q14687 1217 aa11.65□□□□□ -0.54
CLIP4-206ENST00000438819 TSHZ2Q9NRE2 1034 aa11.64□□□□□ -0.55
CLIP4-206ENST00000438819 NUBP1P53384 320 aa11.63□□□□□ -0.55
CLIP4-206ENST00000438819 SP7Q8TDD2 431 aaPredicted RBP11.63□□□□□ -0.55
CLIP4-206ENST00000438819 C19orf67A6NJJ6 358 aa11.62□□□□□ -0.55
CLIP4-206ENST00000438819 HS6ST3Q8IZP7 471 aa11.61□□□□□ -0.55
CLIP4-206ENST00000438819 TAOK2Q9UL54 1235 aa11.6□□□□□ -0.55
CLIP4-206ENST00000438819 EVX2Q03828 476 aa11.59□□□□□ -0.55
CLIP4-206ENST00000438819 RNF25Q96BH1 459 aaPredicted RBP11.59□□□□□ -0.55
CLIP4-206ENST00000438819 PRKCSHP14314 528 aaPredicted RBP11.58□□□□□ -0.56
CLIP4-206ENST00000438819 DCAF8Q5TAQ9 597 aa11.58□□□□□ -0.56
CLIP4-206ENST00000438819 DNAJC5Q9H3Z4 198 aa11.55□□□□□ -0.56
CLIP4-206ENST00000438819 CD44P16070 742 aaKnown RBP11.53□□□□□ -0.56
CLIP4-206ENST00000438819 RIOK3O14730 519 aaKnown RBP11.52□□□□□ -0.57
CLIP4-206ENST00000438819 MNX1P50219 401 aaPredicted RBP11.52□□□□□ -0.57
CLIP4-206ENST00000438819 FAM212AQ96EL1 285 aa11.5□□□□□ -0.57
CLIP4-206ENST00000438819 CHRM1P11229 460 aaPredicted RBP11.46□□□□□ -0.57
CLIP4-206ENST00000438819 NKX1-1Q15270 411 aaPredicted RBP11.45□□□□□ -0.58
CLIP4-206ENST00000438819 VGFO15240 615 aaPredicted RBP11.43□□□□□ -0.58
CLIP4-206ENST00000438819 PAK3O75914 559 aaPredicted RBP11.43□□□□□ -0.58
CLIP4-206ENST00000438819 TPRNQ4KMQ1 711 aa11.43□□□□□ -0.58
CLIP4-206ENST00000438819 RASEFQ8IZ41 740 aa11.43□□□□□ -0.58
CLIP4-206ENST00000438819 ZRANB1Q9UGI0 708 aa11.42□□□□□ -0.58
CLIP4-206ENST00000438819 STK25O00506 426 aa11.41□□□□□ -0.58
CLIP4-206ENST00000438819 GTPBP6O43824 516 aaPredicted RBP11.41□□□□□ -0.58
CLIP4-206ENST00000438819 GABBR2O75899 941 aa11.38□□□□□ -0.59
CLIP4-206ENST00000438819 SGIP1Q9BQI5 828 aa11.38□□□□□ -0.59
CLIP4-206ENST00000438819 CLCN6P51797 869 aa11.37□□□□□ -0.59
CLIP4-206ENST00000438819 ZNF579Q8NAF0 562 aaKnown RBP11.36□□□□□ -0.59
CLIP4-206ENST00000438819 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.33□□□□□ -0.6
CLIP4-206ENST00000438819 PYGBP11216 843 aa11.33□□□□□ -0.6
CLIP4-206ENST00000438819 ZFP91Q96JP5 570 aaPredicted RBP11.33□□□□□ -0.6
CLIP4-206ENST00000438819 NBR1Q14596 966 aa11.32□□□□□ -0.6
CLIP4-206ENST00000438819 BCL11BQ9C0K0 894 aaPredicted RBP11.32□□□□□ -0.6
CLIP4-206ENST00000438819 STK24Q9Y6E0 443 aa11.32□□□□□ -0.6
CLIP4-206ENST00000438819 TSPYL2Q9H2G4 693 aaPredicted RBP11.31□□□□□ -0.6
CLIP4-206ENST00000438819 PHF12Q96QT6 1004 aa11.27□□□□□ -0.61
CLIP4-206ENST00000438819 RYDENQ9NUL5 291 aaKnown RBP11.27□□□□□ -0.61
CLIP4-206ENST00000438819 CCDC61Q9Y6R9 512 aa11.21□□□□□ -0.61
CLIP4-206ENST00000438819 ZNF467Q7Z7K2 595 aaPredicted RBP11.19□□□□□ -0.62
CLIP4-206ENST00000438819 GALR2O43603 387 aaPredicted RBP11.18□□□□□ -0.62
CLIP4-206ENST00000438819 DCBLD2Q96PD2 775 aa11.18□□□□□ -0.62
CLIP4-206ENST00000438819 KIF12Q96FN5 646 aa11.14□□□□□ -0.63
CLIP4-206ENST00000438819 PDAP1Q13442 181 aaKnown RBP11.13□□□□□ -0.63
CLIP4-206ENST00000438819 MS4A3Q96HJ5 214 aa11.12□□□□□ -0.63
CLIP4-206ENST00000438819 PCDHB8Q9UN66 801 aa11.12□□□□□ -0.63
CLIP4-206ENST00000438819 PCDHB13Q9Y5F0 798 aa11.12□□□□□ -0.63
CLIP4-206ENST00000438819 POTEIP0CG38 1075 aa11.1□□□□□ -0.63
CLIP4-206ENST00000438819 MAP3K13O43283 966 aa11.08□□□□□ -0.64
CLIP4-206ENST00000438819 PSEN1P49768 467 aa11.07□□□□□ -0.64
CLIP4-206ENST00000438819 CADPS2Q86UW7 1296 aa11.05□□□□□ -0.64
CLIP4-206ENST00000438819 P3H3Q8IVL6 736 aa11.05□□□□□ -0.64
CLIP4-206ENST00000438819 WDR70Q9NW82 654 aa11.03□□□□□ -0.64
CLIP4-206ENST00000438819 MFRPQ9BY79 579 aa11.02□□□□□ -0.65
CLIP4-206ENST00000438819 ASTLQ6HA08 431 aaPredicted RBP10.98□□□□□ -0.65
CLIP4-206ENST00000438819 IFNL1Q8IU54 200 aa10.98□□□□□ -0.65
CLIP4-206ENST00000438819 ATMINO43313 823 aaPredicted RBP10.97□□□□□ -0.65
CLIP4-206ENST00000438819 KCNV2Q8TDN2 545 aa10.97□□□□□ -0.65
CLIP4-206ENST00000438819 TIE1P35590 1138 aa10.95□□□□□ -0.66
CLIP4-206ENST00000438819 TRPC6Q9Y210 931 aa10.95□□□□□ -0.66
CLIP4-206ENST00000438819 BMP2KQ9NSY1 1161 aaPredicted RBP10.94□□□□□ -0.66
CLIP4-206ENST00000438819 PPP1R37O75864 691 aa10.93□□□□□ -0.66
CLIP4-206ENST00000438819 LHX8Q68G74 356 aa10.93□□□□□ -0.66
CLIP4-206ENST00000438819 PELP1Q8IZL8 1130 aaKnown RBP10.93□□□□□ -0.66
CLIP4-206ENST00000438819 EFCAB3Q8N7B9 438 aa10.93□□□□□ -0.66
CLIP4-206ENST00000438819 FBXO22Q8NEZ5 403 aa10.93□□□□□ -0.66
CLIP4-206ENST00000438819 SOX12O15370 315 aa10.92□□□□□ -0.66
CLIP4-206ENST00000438819 NLRP6P59044 892 aa10.92□□□□□ -0.66
CLIP4-206ENST00000438819 CABP2Q9NPB3 220 aa10.92□□□□□ -0.66
CLIP4-206ENST00000438819 ATN1P54259 1190 aaPredicted RBP10.91□□□□□ -0.66
CLIP4-206ENST00000438819 TTLL13PA6NNM8 815 aa10.89□□□□□ -0.67
CLIP4-206ENST00000438819 C7P10643 843 aa10.89□□□□□ -0.67
CLIP4-206ENST00000438819 SLC39A7Q92504 469 aa10.89□□□□□ -0.67
CLIP4-206ENST00000438819 PHF8Q9UPP1 1060 aa10.89□□□□□ -0.67
CLIP4-206ENST00000438819 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.88□□□□□ -0.67
CLIP4-206ENST00000438819 TMEM106CQ9BVX2 250 aa10.86□□□□□ -0.67
CLIP4-206ENST00000438819 METRNQ9UJH8 293 aa10.86□□□□□ -0.67
CLIP4-206ENST00000438819 LMOD2Q6P5Q4 547 aa10.85□□□□□ -0.67
CLIP4-206ENST00000438819 ARHGEF1Q92888 912 aaKnown RBP10.85□□□□□ -0.67
CLIP4-206ENST00000438819 E2F4Q16254 413 aa10.83□□□□□ -0.68
CLIP4-206ENST00000438819 TRIM35Q9UPQ4 493 aa10.83□□□□□ -0.68
CLIP4-206ENST00000438819 TULP1O00294 542 aaPredicted RBP10.79□□□□□ -0.68
CLIP4-206ENST00000438819 IER5LQ5T953 404 aa10.78□□□□□ -0.68
CLIP4-206ENST00000438819 MS4A4AQ96JQ5 239 aa10.78□□□□□ -0.68
CLIP4-206ENST00000438819 SEC24BO95487 1268 aa10.77□□□□□ -0.69
CLIP4-206ENST00000438819 NCKAP5LQ9HCH0 1330 aa10.77□□□□□ -0.69
CLIP4-206ENST00000438819 PDE4AP27815 886 aa10.76□□□□□ -0.69
CLIP4-206ENST00000438819 LARP6Q9BRS8 491 aaKnown RBP10.75□□□□□ -0.69
CLIP4-206ENST00000438819 POTEB2H3BUK9 544 aa10.74□□□□□ -0.69
CLIP4-206ENST00000438819 TMEM132AQ24JP5 1023 aa10.74□□□□□ -0.69
CLIP4-206ENST00000438819 GTF3C3Q9Y5Q9 886 aa10.74□□□□□ -0.69
CLIP4-206ENST00000438819 TESPA1A2RU30 521 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms